miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>27898_mml-mir-423:mirbase
Length = 94
Score = 159 bits (80), Expect = 4e-40
Identities = 80/80 (100%)
Strand = Plus / Plus
Query: 1 aagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgaggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8 aagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgaggc 67
Query: 61 ccctcagtcttgcttcctac 80
||||||||||||||||||||
Sbjct: 68 ccctcagtcttgcttcctac 87
>27899_mml-mir-423:mirbase
Length = 94
Score = 159 bits (80), Expect = 4e-40
Identities = 80/80 (100%)
Strand = Plus / Plus
Query: 1 aagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgaggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8 aagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgaggc 67
Query: 61 ccctcagtcttgcttcctac 80
||||||||||||||||||||
Sbjct: 68 ccctcagtcttgcttcctac 87
>30370_ptr-mir-423:mirbase
Length = 93
Score = 159 bits (80), Expect = 4e-40
Identities = 80/80 (100%)
Strand = Plus / Plus
Query: 1 aagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgaggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8 aagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgaggc 67
Query: 61 ccctcagtcttgcttcctac 80
||||||||||||||||||||
Sbjct: 68 ccctcagtcttgcttcctac 87
>30999_ppy-mir-423:mirbase
Length = 90
Score = 159 bits (80), Expect = 4e-40
Identities = 80/80 (100%)
Strand = Plus / Plus
Query: 1 aagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgaggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 aagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgaggc 63
Query: 61 ccctcagtcttgcttcctac 80
||||||||||||||||||||
Sbjct: 64 ccctcagtcttgcttcctac 83
>31000_ppy-mir-423:mirbase
Length = 90
Score = 159 bits (80), Expect = 4e-40
Identities = 80/80 (100%)
Strand = Plus / Plus
Query: 1 aagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgaggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 aagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgaggc 63
Query: 61 ccctcagtcttgcttcctac 80
||||||||||||||||||||
Sbjct: 64 ccctcagtcttgcttcctac 83
>32066_mmu-mir-423:mirbase
Length = 109
Score = 159 bits (80), Expect = 4e-40
Identities = 80/80 (100%)
Strand = Plus / Plus
Query: 1 aagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgaggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20 aagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgaggc 79
Query: 61 ccctcagtcttgcttcctac 80
||||||||||||||||||||
Sbjct: 80 ccctcagtcttgcttcctac 99
>32067_mmu-mir-423:mirbase
Length = 109
Score = 159 bits (80), Expect = 4e-40
Identities = 80/80 (100%)
Strand = Plus / Plus
Query: 1 aagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgaggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20 aagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgaggc 79
Query: 61 ccctcagtcttgcttcctac 80
||||||||||||||||||||
Sbjct: 80 ccctcagtcttgcttcctac 99
>33367_bta-mir-423:mirbase
Length = 94
Score = 159 bits (80), Expect = 4e-40
Identities = 80/80 (100%)
Strand = Plus / Plus
Query: 1 aagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgaggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8 aagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgaggc 67
Query: 61 ccctcagtcttgcttcctac 80
||||||||||||||||||||
Sbjct: 68 ccctcagtcttgcttcctac 87
>33368_bta-mir-423:mirbase
Length = 94
Score = 159 bits (80), Expect = 4e-40
Identities = 80/80 (100%)
Strand = Plus / Plus
Query: 1 aagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgaggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8 aagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgaggc 67
Query: 61 ccctcagtcttgcttcctac 80
||||||||||||||||||||
Sbjct: 68 ccctcagtcttgcttcctac 87
>34090_ssc-mir-423:mirbase
Length = 80
Score = 159 bits (80), Expect = 4e-40
Identities = 80/80 (100%)
Strand = Plus / Plus
Query: 1 aagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgaggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgaggc 60
Query: 61 ccctcagtcttgcttcctac 80
||||||||||||||||||||
Sbjct: 61 ccctcagtcttgcttcctac 80
>28645_hsa-mir-423:mirbase
Length = 94
Score = 157 bits (79), Expect = 1e-39
Identities = 79/79 (100%)
Strand = Plus / Plus
Query: 1 aagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgaggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8 aagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgaggc 67
Query: 61 ccctcagtcttgcttccta 79
|||||||||||||||||||
Sbjct: 68 ccctcagtcttgcttccta 86
>28646_hsa-mir-423:mirbase
Length = 94
Score = 157 bits (79), Expect = 1e-39
Identities = 79/79 (100%)
Strand = Plus / Plus
Query: 1 aagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgaggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8 aagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgaggc 67
Query: 61 ccctcagtcttgcttccta 79
|||||||||||||||||||
Sbjct: 68 ccctcagtcttgcttccta 86
>32908_rno-mir-423:mirbase
Length = 79
Score = 155 bits (78), Expect = 6e-39
Identities = 78/78 (100%)
Strand = Plus / Plus
Query: 1 aagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgaggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 aagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgaggc 61
Query: 61 ccctcagtcttgcttcct 78
||||||||||||||||||
Sbjct: 62 ccctcagtcttgcttcct 79
>29349_hsa-mir-3184:mirbase
Length = 75
Score = 149 bits (75), Expect = 3e-37
Identities = 75/75 (100%)
Strand = Plus / Minus
Query: 1 aagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgaggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 aagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgaggc 16
Query: 61 ccctcagtcttgctt 75
|||||||||||||||
Sbjct: 15 ccctcagtcttgctt 1
>27173_eca-mir-423:mirbase
Length = 63
Score = 125 bits (63), Expect = 5e-30
Identities = 63/63 (100%)
Strand = Plus / Plus
Query: 6 aggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgaggcccctc 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgaggcccctc 60
Query: 66 agt 68
|||
Sbjct: 61 agt 63
>27174_eca-mir-423:mirbase
Length = 63
Score = 125 bits (63), Expect = 5e-30
Identities = 63/63 (100%)
Strand = Plus / Plus
Query: 6 aggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgaggcccctc 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgaggcccctc 60
Query: 66 agt 68
|||
Sbjct: 61 agt 63
>26840_cfa-mir-423a:mirbase
Length = 59
Score = 117 bits (59), Expect = 1e-27
Identities = 59/59 (100%)
Strand = Plus / Plus
Query: 10 tgaggggcagagagcgagacttttctattttccaaaagctcggtctgaggcccctcagt 68
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgaggggcagagagcgagacttttctattttccaaaagctcggtctgaggcccctcagt 59
