miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>27917_mml-mir-455:mirbase
Length = 96
Score = 159 bits (80), Expect = 4e-40
Identities = 80/80 (100%)
Strand = Plus / Plus
Query: 1 tggcgtgagggtatgtgcctttggactacatcgtggaagccagcaccatgcagtccatgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 tggcgtgagggtatgtgcctttggactacatcgtggaagccagcaccatgcagtccatgg 64
Query: 61 gcatatacacttgcctcaag 80
||||||||||||||||||||
Sbjct: 65 gcatatacacttgcctcaag 84
>27918_mml-mir-455:mirbase
Length = 96
Score = 159 bits (80), Expect = 4e-40
Identities = 80/80 (100%)
Strand = Plus / Plus
Query: 1 tggcgtgagggtatgtgcctttggactacatcgtggaagccagcaccatgcagtccatgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 tggcgtgagggtatgtgcctttggactacatcgtggaagccagcaccatgcagtccatgg 64
Query: 61 gcatatacacttgcctcaag 80
||||||||||||||||||||
Sbjct: 65 gcatatacacttgcctcaag 84
>28665_hsa-mir-455:mirbase
Length = 96
Score = 159 bits (80), Expect = 4e-40
Identities = 80/80 (100%)
Strand = Plus / Plus
Query: 1 tggcgtgagggtatgtgcctttggactacatcgtggaagccagcaccatgcagtccatgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 tggcgtgagggtatgtgcctttggactacatcgtggaagccagcaccatgcagtccatgg 64
Query: 61 gcatatacacttgcctcaag 80
||||||||||||||||||||
Sbjct: 65 gcatatacacttgcctcaag 84
>28666_hsa-mir-455:mirbase
Length = 96
Score = 159 bits (80), Expect = 4e-40
Identities = 80/80 (100%)
Strand = Plus / Plus
Query: 1 tggcgtgagggtatgtgcctttggactacatcgtggaagccagcaccatgcagtccatgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 tggcgtgagggtatgtgcctttggactacatcgtggaagccagcaccatgcagtccatgg 64
Query: 61 gcatatacacttgcctcaag 80
||||||||||||||||||||
Sbjct: 65 gcatatacacttgcctcaag 84
>30386_ptr-mir-455:mirbase
Length = 95
Score = 159 bits (80), Expect = 4e-40
Identities = 80/80 (100%)
Strand = Plus / Plus
Query: 1 tggcgtgagggtatgtgcctttggactacatcgtggaagccagcaccatgcagtccatgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 tggcgtgagggtatgtgcctttggactacatcgtggaagccagcaccatgcagtccatgg 63
Query: 61 gcatatacacttgcctcaag 80
||||||||||||||||||||
Sbjct: 64 gcatatacacttgcctcaag 83
>31017_ppy-mir-455:mirbase
Length = 96
Score = 159 bits (80), Expect = 4e-40
Identities = 80/80 (100%)
Strand = Plus / Plus
Query: 1 tggcgtgagggtatgtgcctttggactacatcgtggaagccagcaccatgcagtccatgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 tggcgtgagggtatgtgcctttggactacatcgtggaagccagcaccatgcagtccatgg 64
Query: 61 gcatatacacttgcctcaag 80
||||||||||||||||||||
Sbjct: 65 gcatatacacttgcctcaag 84
>31018_ppy-mir-455:mirbase
Length = 96
Score = 159 bits (80), Expect = 4e-40
Identities = 80/80 (100%)
Strand = Plus / Plus
Query: 1 tggcgtgagggtatgtgcctttggactacatcgtggaagccagcaccatgcagtccatgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 tggcgtgagggtatgtgcctttggactacatcgtggaagccagcaccatgcagtccatgg 64
Query: 61 gcatatacacttgcctcaag 80
||||||||||||||||||||
Sbjct: 65 gcatatacacttgcctcaag 84
>33387_bta-mir-455:mirbase
Length = 89
Score = 159 bits (80), Expect = 4e-40
Identities = 80/80 (100%)
Strand = Plus / Plus
Query: 1 tggcgtgagggtatgtgcctttggactacatcgtggaagccagcaccatgcagtccatgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 tggcgtgagggtatgtgcctttggactacatcgtggaagccagcaccatgcagtccatgg 64
Query: 61 gcatatacacttgcctcaag 80
||||||||||||||||||||
Sbjct: 65 gcatatacacttgcctcaag 84
>25863_xtr-mir-455:mirbase
Length = 87
Score = 151 bits (76), Expect = 9e-38
Identities = 79/80 (98%)
Strand = Plus / Plus
Query: 1 tggcgtgagggtatgtgcctttggactacatcgtggaagccagcaccatgcagtccatgg 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 tggcgtgagggtatgtgcccttggactacatcgtggaagccagcaccatgcagtccatgg 64
Query: 61 gcatatacacttgcctcaag 80
||||||||||||||||||||
Sbjct: 65 gcatatacacttgcctcaag 84
>26032_gga-mir-455:mirbase
Length = 86
Score = 143 bits (72), Expect = 2e-35
Identities = 75/76 (98%)
Strand = Plus / Plus
Query: 5 gtgagggtatgtgcctttggactacatcgtggaagccagcaccatgcagtccatgggcat 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 gtgagggtatgtgcccttggactacatcgtggaagccagcaccatgcagtccatgggcat 68
Query: 65 atacacttgcctcaag 80
||||||||||||||||
Sbjct: 69 atacacttgcctcaag 84
>26033_gga-mir-455:mirbase
Length = 86
Score = 143 bits (72), Expect = 2e-35
Identities = 75/76 (98%)
Strand = Plus / Plus
Query: 5 gtgagggtatgtgcctttggactacatcgtggaagccagcaccatgcagtccatgggcat 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 gtgagggtatgtgcccttggactacatcgtggaagccagcaccatgcagtccatgggcat 68
Query: 65 atacacttgcctcaag 80
||||||||||||||||
Sbjct: 69 atacacttgcctcaag 84
>27453_mdo-mir-455:mirbase
Length = 87
Score = 143 bits (72), Expect = 2e-35
Identities = 78/80 (97%)
Strand = Plus / Plus
Query: 1 tggcgtgagggtatgtgcctttggactacatcgtggaagccagcaccatgcagtccatgg 60
||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||
Sbjct: 5 tggcgtgagggtatgtgcccttggactacatcgtggaagccaacaccatgcagtccatgg 64
Query: 61 gcatatacacttgcctcaag 80
||||||||||||||||||||
Sbjct: 65 gcatatacacttgcctcaag 84
>34476_dre-mir-455:mirbase
Length = 96
Score = 143 bits (72), Expect = 2e-35
Identities = 75/76 (98%)
Strand = Plus / Plus
Query: 5 gtgagggtatgtgcctttggactacatcgtggaagccagcaccatgcagtccatgggcat 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 gtgagggtatgtgcccttggactacatcgtggaagccagcaccatgcagtccatgggcat 68
Query: 65 atacacttgcctcaag 80
||||||||||||||||
Sbjct: 69 atacacttgcctcaag 84
>34653_fru-mir-455:mirbase
Length = 84
Score = 139 bits (70), Expect = 3e-34
Identities = 73/74 (98%)
Strand = Plus / Plus
Query: 5 gtgagggtatgtgcctttggactacatcgtggaagccagcaccatgcagtccatgggcat 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8 gtgagggtatgtgcccttggactacatcgtggaagccagcaccatgcagtccatgggcat 67
Query: 65 atacacttgcctca 78
||||||||||||||
Sbjct: 68 atacacttgcctca 81
>34801_tni-mir-455:mirbase
Length = 84
Score = 135 bits (68), Expect = 5e-33
Identities = 74/76 (97%)
Strand = Plus / Plus
Query: 5 gtgagggtatgtgcctttggactacatcgtggaagccagcaccatgcagtccatgggcat 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8 gtgagggtatgtgcccttggactacatcgtggaagccagcaccatgcagtccatgggcat 67
Query: 65 atacacttgcctcaag 80
|||||||| |||||||
Sbjct: 68 atacactttcctcaag 83
>26534_tgu-mir-455:mirbase
Length = 71
Score = 133 bits (67), Expect = 2e-32
Identities = 70/71 (98%)
Strand = Plus / Plus
Query: 9 gggtatgtgcctttggactacatcgtggaagccagcaccatgcagtccatgggcatatac 68
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gggtatgtgcccttggactacatcgtggaagccagcaccatgcagtccatgggcatatac 60
Query: 69 acttgcctcaa 79
|||||||||||
Sbjct: 61 acttgcctcaa 71
>26853_cfa-mir-455:mirbase
Length = 58
Score = 115 bits (58), Expect = 5e-27
Identities = 58/58 (100%)
Strand = Plus / Plus
Query: 12 tatgtgcctttggactacatcgtggaagccagcaccatgcagtccatgggcatataca 69
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tatgtgcctttggactacatcgtggaagccagcaccatgcagtccatgggcatataca 58
>32920_rno-mir-455:mirbase
Length = 78
Score = 111 bits (56), Expect = 7e-26
Identities = 72/76 (94%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 5 gtgagggtatgtgcctttggactacatcgtggaagccagcaccatgcagtccatgggcat 64
||||| ||||||||||||||||||||||||||| || |||||||||||||||| ||||||
Sbjct: 4 gtgagcgtatgtgcctttggactacatcgtggacgc-agcaccatgcagtccacgggcat 62
Query: 65 atacacttgcctcaag 80
||||||||||||||||
Sbjct: 63 atacacttgcctcaag 78
>34477_dre-mir-455b:mirbase
Length = 105
Score = 111 bits (56), Expect = 7e-26
Identities = 65/68 (95%)
Strand = Plus / Plus
Query: 5 gtgagggtatgtgcctttggactacatcgtggaagccagcaccatgcagtccatgggcat 64
||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 17 gtgagggtatgtgcccttggactacattgtggaggccagcaccatgcagtccatgggcat 76
Query: 65 atacactt 72
||||||||
Sbjct: 77 atacactt 84
>32088_mmu-mir-455:mirbase
Length = 82
Score = 99.6 bits (50), Expect = 3e-22
Identities = 69/74 (93%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 5 gtgagggtatgtgcctttggactacatcgtggaagccagcaccatgcagtccatgggcat 64
||||| ||||||||||||||||||||||||| | || |||||||||||||||| ||||||
Sbjct: 10 gtgagcgtatgtgcctttggactacatcgtgaacgc-agcaccatgcagtccacgggcat 68
Query: 65 atacacttgcctca 78
||||||||||||||
Sbjct: 69 atacacttgcctca 82
