miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>34581_fru-mir-101b:mirbase
Length = 88
Score = 123 bits (62), Expect = 3e-29
Identities = 80/86 (93%)
Strand = Plus / Plus
Query: 13 tgaattgtccattttcagttatcatggtaccggtgctgtgtgcctgtcaagtacagtact 72
|||| ||||||||||||||||||||||||||| |||||||| ||| ||||||||||||||
Sbjct: 1 tgaactgtccattttcagttatcatggtaccgctgctgtgtccctctcaagtacagtact 60
Query: 73 atgataactgaagattgacggtgcca 98
||||||||||||||||| | ||||||
Sbjct: 61 atgataactgaagattggcagtgcca 86
>34728_tni-mir-101b:mirbase
Length = 88
Score = 115 bits (58), Expect = 7e-27
Identities = 79/86 (91%)
Strand = Plus / Plus
Query: 13 tgaattgtccattttcagttatcatggtaccggtgctgtgtgcctgtcaagtacagtact 72
|||| ||||||||||| ||||||||||||||| |||||||| ||| ||||||||||||||
Sbjct: 1 tgaactgtccattttcggttatcatggtaccgctgctgtgtccctctcaagtacagtact 60
Query: 73 atgataactgaagattgacggtgcca 98
||||||||||||||||| | ||||||
Sbjct: 61 atgataactgaagattggcagtgcca 86
>25756_xtr-mir-101a-1:mirbase
Length = 91
Score = 67.9 bits (34), Expect = 1e-12
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 13 tgaattgtccattttcagttatcatggtaccggtgctgtgtgcctgtcaagtacagtact 72
|||| ||||| ||||| |||||||||||||||||||||||| || | ||||||||||
Sbjct: 4 tgaactgtcctttttcggttatcatggtaccggtgctgtgtatatgaaaggtacagtact 63
Query: 73 atgataactgaaga 86
|||||||||||||
Sbjct: 64 gtgataactgaaga 77
>25931_gga-mir-101:mirbase
Length = 79
Score = 61.9 bits (31), Expect = 9e-11
Identities = 55/63 (87%)
Strand = Plus / Plus
Query: 24 ttttcagttatcatggtaccggtgctgtgtgcctgtcaagtacagtactatgataactga 83
||||| |||||||||||||||||||||| | | || | |||||||||| ||||||||||
Sbjct: 9 ttttcggttatcatggtaccggtgctgtatacgtgaaaggtacagtactgtgataactga 68
Query: 84 aga 86
|||
Sbjct: 69 aga 71
>26442_tgu-mir-101-1:mirbase
Length = 72
Score = 61.9 bits (31), Expect = 9e-11
Identities = 55/63 (87%)
Strand = Plus / Plus
Query: 24 ttttcagttatcatggtaccggtgctgtgtgcctgtcaagtacagtactatgataactga 83
||||| |||||||||||||||||||||| | | || | |||||||||| ||||||||||
Sbjct: 2 ttttcggttatcatggtaccggtgctgtatacgtgaaaggtacagtactgtgataactga 61
Query: 84 aga 86
|||
Sbjct: 62 aga 64
>33959_ssc-mir-101-1:mirbase
Length = 91
Score = 60.0 bits (30), Expect = 4e-10
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 13 tgaattgtccattttcagttatcatggtaccggtgctgtgtgcctgtcaagtacagtact 72
|||| ||||| ||||| ||||||||||||||| |||||| | ||| | ||||||||||
Sbjct: 4 tgaactgtcctttttcggttatcatggtaccgatgctgtatatctgaaaggtacagtact 63
Query: 73 atgataactgaaga 86
|||||||||||||
Sbjct: 64 gtgataactgaaga 77
>27706_mml-mir-101-2:mirbase
Length = 79
Score = 58.0 bits (29), Expect = 1e-09
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 18 tgtccattttcagttatcatggtaccggtgctgtgtgcctgtcaagtacagtactatgat 77
||||| ||||| ||||||||||||||| |||||| | ||| | |||||||||| ||||
Sbjct: 3 tgtcctttttcggttatcatggtaccgatgctgtatatctgaaaggtacagtactgtgat 62
Query: 78 aactgaaga 86
|||||||||
Sbjct: 63 aactgaaga 71
>28416_hsa-mir-101-2:mirbase
Length = 79
Score = 58.0 bits (29), Expect = 1e-09
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 18 tgtccattttcagttatcatggtaccggtgctgtgtgcctgtcaagtacagtactatgat 77
||||| ||||| ||||||||||||||| |||||| | ||| | |||||||||| ||||
Sbjct: 3 tgtcctttttcggttatcatggtaccgatgctgtatatctgaaaggtacagtactgtgat 62
Query: 78 aactgaaga 86
|||||||||
Sbjct: 63 aactgaaga 71
>30200_ptr-mir-101-2:mirbase
Length = 78
Score = 58.0 bits (29), Expect = 1e-09
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 18 tgtccattttcagttatcatggtaccggtgctgtgtgcctgtcaagtacagtactatgat 77
||||| ||||| ||||||||||||||| |||||| | ||| | |||||||||| ||||
Sbjct: 2 tgtcctttttcggttatcatggtaccgatgctgtatatctgaaaggtacagtactgtgat 61
Query: 78 aactgaaga 86
|||||||||
Sbjct: 62 aactgaaga 70
>30806_ppy-mir-101-2:mirbase
Length = 79
Score = 58.0 bits (29), Expect = 1e-09
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 18 tgtccattttcagttatcatggtaccggtgctgtgtgcctgtcaagtacagtactatgat 77
||||| ||||| ||||||||||||||| |||||| | ||| | |||||||||| ||||
Sbjct: 3 tgtcctttttcggttatcatggtaccgatgctgtatatctgaaaggtacagtactgtgat 62
Query: 78 aactgaaga 86
|||||||||
Sbjct: 63 aactgaaga 71
>33188_bta-mir-101:mirbase
Length = 79
Score = 58.0 bits (29), Expect = 1e-09
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 18 tgtccattttcagttatcatggtaccggtgctgtgtgcctgtcaagtacagtactatgat 77
||||| ||||| ||||||||||||||| |||||| | ||| | |||||||||| ||||
Sbjct: 3 tgtcctttttcggttatcatggtaccgatgctgtatatctgaaaggtacagtactgtgat 62
Query: 78 aactgaaga 86
|||||||||
Sbjct: 63 aactgaaga 71
>26999_eca-mir-101-2:mirbase
Length = 72
Score = 54.0 bits (27), Expect = 2e-08
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 24 ttttcagttatcatggtaccggtgctgtgtgcctgtcaagtacagtactatgataactga 83
||||| ||||||||||||||| |||||| | ||| | |||||||||| ||||||||||
Sbjct: 4 ttttcggttatcatggtaccgatgctgtatatctgaaaggtacagtactgtgataactga 63
Query: 84 aga 86
|||
Sbjct: 64 aga 66
>27366_mdo-mir-101-2:mirbase
Length = 79
Score = 50.1 bits (25), Expect = 3e-07
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 18 tgtccattttcagttatcatggtaccggtgctgtgtgcctgtcaagtacagtactatgat 77
||||| ||||| ||||||||||||||| |||||| | || | |||||||||| ||||
Sbjct: 3 tgtcctttttcggttatcatggtaccgatgctgtatatgtgaaaggtacagtactgtgat 62
Query: 78 aactgaaga 86
|||||||||
Sbjct: 63 aactgaaga 71
>31829_mmu-mir-101b:mirbase
Length = 97
Score = 46.1 bits (23), Expect = 5e-06
Identities = 62/75 (82%)
Strand = Plus / Plus
Query: 24 ttttcagttatcatggtaccggtgctgtgtgcctgtcaagtacagtactatgataactga 83
||||| ||||||||||||||| |||||| ||| | |||||||||| ||||| ||||
Sbjct: 21 ttttcggttatcatggtaccgatgctgtagctctgaaaggtacagtactgtgatagctga 80
Query: 84 agattgacggtgcca 98
||| || ||||||||
Sbjct: 81 agaatggcggtgcca 95
>32710_rno-mir-101b:mirbase
Length = 97
Score = 46.1 bits (23), Expect = 5e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 13 tgaattgtccattttcagttatcatggtaccggtgctgt 51
|||| ||||| ||||| ||||||||||||||| ||||||
Sbjct: 10 tgaactgtcctttttcggttatcatggtaccgatgctgt 48
>26677_cfa-mir-101-2:mirbase
Length = 55
Score = 44.1 bits (22), Expect = 2e-05
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 30 gttatcatggtaccggtgctgtgtgcctgtcaagtacagtactatgataactga 83
||||||||||||||| |||||| | ||| | |||||||||| ||||||||||
Sbjct: 2 gttatcatggtaccgatgctgtatatctgaaaggtacagtactgtgataactga 55
>31473_oan-mir-101-2:mirbase
Length = 79
Score = 42.1 bits (21), Expect = 8e-05
Identities = 57/69 (82%)
Strand = Plus / Plus
Query: 18 tgtccattttcagttatcatggtaccggtgctgtgtgcctgtcaagtacagtactatgat 77
||||| ||||| ||||||| ||||||| |||||| | || | |||||||||| ||||
Sbjct: 3 tgtcctttttcggttatcacggtaccgatgctgtatatgtgaaaggtacagtactgtgat 62
Query: 78 aactgaaga 86
|||||||||
Sbjct: 63 aactgaaga 71
