miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>34783_tni-mir-212:mirbase
Length = 95
Score = 101 bits (51), Expect = 9e-23
Identities = 86/95 (90%), Gaps = 2/95 (2%)
Strand = Plus / Plus
Query: 1 gtcagtgcatcaataccttggctctagactgcttactgctaaatgtg-tctgaaagtaca 59
||||| ||||||| |||||||||||||||||||||||||||| | |||||| |||||
Sbjct: 2 gtcagcgcatcaacaccttggctctagactgcttactgctaacaccgctctgaa-gtaca 60
Query: 60 gtaacagtctacagtcatggctactgacgtctggc 94
||||||||||||||||||||||||||||| |||||
Sbjct: 61 gtaacagtctacagtcatggctactgacgcctggc 95
>34635_fru-mir-212:mirbase
Length = 95
Score = 97.6 bits (49), Expect = 1e-21
Identities = 81/89 (91%), Gaps = 2/89 (2%)
Strand = Plus / Plus
Query: 1 gtcagtgcatcaataccttggctctagactgcttactgctaaatgtgtctga-aagtaca 59
||||| ||||||| ||||||||||||||||||||||||||||| | || | |||||||
Sbjct: 2 gtcagcgcatcaacaccttggctctagactgcttactgctaaaaccg-ctcataagtaca 60
Query: 60 gtaacagtctacagtcatggctactgacg 88
|||||||||||||||||||||||||||||
Sbjct: 61 gtaacagtctacagtcatggctactgacg 89
>25832_xtr-mir-212:mirbase
Length = 96
Score = 71.9 bits (36), Expect = 8e-14
Identities = 68/76 (89%), Gaps = 2/76 (2%)
Strand = Plus / Plus
Query: 15 accttggctctagactgcttactgctaaa-tgtgtctgaaagtacagtaacagtctacag 73
|||||||||||||||||||||||| ||| |||| || | | |||||||||||||||||
Sbjct: 17 accttggctctagactgcttactgtgaaactgtg-ctataggaacagtaacagtctacag 75
Query: 74 tcatggctactgacgt 89
||||||||||||||||
Sbjct: 76 tcatggctactgacgt 91
>26772_cfa-mir-212:mirbase
Length = 62
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 accttggctctagactgcttactgc 39
|||||||||||||||||||||||||
Sbjct: 1 accttggctctagactgcttactgc 25
>27427_mdo-mir-212:mirbase
Length = 91
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 accttggctctagactgcttactgc 39
|||||||||||||||||||||||||
Sbjct: 16 accttggctctagactgcttactgc 40
>27808_mml-mir-212:mirbase
Length = 110
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 accttggctctagactgcttactgc 39
|||||||||||||||||||||||||
Sbjct: 31 accttggctctagactgcttactgc 55
>28530_hsa-mir-212:mirbase
Length = 110
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 accttggctctagactgcttactgc 39
|||||||||||||||||||||||||
Sbjct: 31 accttggctctagactgcttactgc 55
>31939_mmu-mir-212:mirbase
Length = 91
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 accttggctctagactgcttactgc 39
|||||||||||||||||||||||||
Sbjct: 16 accttggctctagactgcttactgc 40
>31940_mmu-mir-212:mirbase
Length = 91
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 accttggctctagactgcttactgc 39
|||||||||||||||||||||||||
Sbjct: 16 accttggctctagactgcttactgc 40
>32803_rno-mir-212:mirbase
Length = 111
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 accttggctctagactgcttactgc 39
|||||||||||||||||||||||||
Sbjct: 32 accttggctctagactgcttactgc 56
>33289_bta-mir-212:mirbase
Length = 111
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 accttggctctagactgcttactgc 39
|||||||||||||||||||||||||
Sbjct: 32 accttggctctagactgcttactgc 56
>27096_eca-mir-212:mirbase
Length = 60
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 16 ccttggctctagactgcttactgc 39
||||||||||||||||||||||||
Sbjct: 1 ccttggctctagactgcttactgc 24
