miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>34650_fru-mir-365:mirbase
Length = 95
Score = 168 bits (85), Expect = 5e-43
Identities = 88/89 (98%)
Strand = Plus / Plus
Query: 4 cagcaagaaaaatgagggacttttaggggcagctgtgttttattaacccagtcataatgc 63
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cagcaagaaaagtgagggacttttaggggcagctgtgttttattaacccagtcataatgc 60
Query: 64 ccctaaaaatccttattgctcttgcaatt 92
|||||||||||||||||||||||||||||
Sbjct: 61 ccctaaaaatccttattgctcttgcaatt 89
>34798_tni-mir-365:mirbase
Length = 92
Score = 168 bits (85), Expect = 5e-43
Identities = 88/89 (98%)
Strand = Plus / Plus
Query: 4 cagcaagaaaaatgagggacttttaggggcagctgtgttttattaacccagtcataatgc 63
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cagcaagaaaagtgagggacttttaggggcagctgtgttttattaacccagtcataatgc 60
Query: 64 ccctaaaaatccttattgctcttgcaatt 92
|||||||||||||||||||||||||||||
Sbjct: 61 ccctaaaaatccttattgctcttgcaatt 89
>26022_gga-mir-365-2:mirbase
Length = 96
Score = 155 bits (78), Expect = 7e-39
Identities = 87/90 (96%)
Strand = Plus / Plus
Query: 2 ggcagcaagaaaaatgagggacttttaggggcagctgtgttttattaacccagtcataat 61
||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 1 ggcagcaagaaaaatgagggactttcaggggcagctgtgttttactaacccagtcataat 60
Query: 62 gcccctaaaaatccttattgctcttgcaat 91
|||||||||||||||||||| |||||||||
Sbjct: 61 gcccctaaaaatccttattgttcttgcaat 90
>26527_tgu-mir-365-2:mirbase
Length = 112
Score = 151 bits (76), Expect = 1e-37
Identities = 85/88 (96%)
Strand = Plus / Plus
Query: 2 ggcagcaagaaaaatgagggacttttaggggcagctgtgttttattaacccagtcataat 61
||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 25 ggcagcaagaaaaatgagggactttcaggggcagctgtgttttactaacccagtcataat 84
Query: 62 gcccctaaaaatccttattgctcttgca 89
|||||||||||||||||||| |||||||
Sbjct: 85 gcccctaaaaatccttattgttcttgca 112
>34396_dre-mir-365-3:mirbase
Length = 99
Score = 139 bits (70), Expect = 4e-34
Identities = 82/86 (95%)
Strand = Plus / Plus
Query: 4 cagcaagaaaaatgagggacttttaggggcagctgtgttttattaacccagtcataatgc 63
||||||||||| ||||||||||||||||||||||||||| || | |||||||||||||||
Sbjct: 5 cagcaagaaaagtgagggacttttaggggcagctgtgttatactgacccagtcataatgc 64
Query: 64 ccctaaaaatccttattgctcttgca 89
||||||||||||||||||||||||||
Sbjct: 65 ccctaaaaatccttattgctcttgca 90
>34397_dre-mir-365-4:mirbase
Length = 99
Score = 139 bits (70), Expect = 4e-34
Identities = 82/86 (95%)
Strand = Plus / Plus
Query: 4 cagcaagaaaaatgagggacttttaggggcagctgtgttttattaacccagtcataatgc 63
||||||||||| ||||||||||||||||||||||||||| || | |||||||||||||||
Sbjct: 5 cagcaagaaaagtgagggacttttaggggcagctgtgttatactgacccagtcataatgc 64
Query: 64 ccctaaaaatccttattgctcttgca 89
||||||||||||||||||||||||||
Sbjct: 65 ccctaaaaatccttattgctcttgca 90
>26815_cfa-mir-365-2:mirbase
Length = 111
Score = 115 bits (58), Expect = 6e-27
Identities = 80/86 (93%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 4 cagcaagaaaaatgagggacttttaggggcagctgtgttttattaacccagtcataatgc 63
||||||||||||||||||||||| ||||||||||||||||| | || ||||||||||||
Sbjct: 15 cagcaagaaaaatgagggactttcaggggcagctgtgtttt-ctgactcagtcataatgc 73
Query: 64 ccctaaaaatccttattgctcttgca 89
|||||||||||||||||| |||||||
Sbjct: 74 ccctaaaaatccttattgttcttgca 99
>27865_mml-mir-365-2:mirbase
Length = 111
Score = 115 bits (58), Expect = 6e-27
Identities = 80/86 (93%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 4 cagcaagaaaaatgagggacttttaggggcagctgtgttttattaacccagtcataatgc 63
||||||||||||||||||||||| ||||||||||||||||| | || ||||||||||||
Sbjct: 15 cagcaagaaaaatgagggactttcaggggcagctgtgtttt-ctgactcagtcataatgc 73
Query: 64 ccctaaaaatccttattgctcttgca 89
|||||||||||||||||| |||||||
Sbjct: 74 ccctaaaaatccttattgttcttgca 99
>28602_hsa-mir-365-2:mirbase
Length = 111
Score = 115 bits (58), Expect = 6e-27
Identities = 80/86 (93%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 4 cagcaagaaaaatgagggacttttaggggcagctgtgttttattaacccagtcataatgc 63
||||||||||||||||||||||| ||||||||||||||||| | || ||||||||||||
Sbjct: 15 cagcaagaaaaatgagggactttcaggggcagctgtgtttt-ctgactcagtcataatgc 73
Query: 64 ccctaaaaatccttattgctcttgca 89
|||||||||||||||||| |||||||
Sbjct: 74 ccctaaaaatccttattgttcttgca 99
>30969_ppy-mir-365-2:mirbase
Length = 111
Score = 115 bits (58), Expect = 6e-27
Identities = 80/86 (93%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 4 cagcaagaaaaatgagggacttttaggggcagctgtgttttattaacccagtcataatgc 63
||||||||||||||||||||||| ||||||||||||||||| | || ||||||||||||
Sbjct: 15 cagcaagaaaaatgagggactttcaggggcagctgtgtttt-ctgactcagtcataatgc 73
Query: 64 ccctaaaaatccttattgctcttgca 89
|||||||||||||||||| |||||||
Sbjct: 74 ccctaaaaatccttattgttcttgca 99
>33340_bta-mir-365-2:mirbase
Length = 111
Score = 115 bits (58), Expect = 6e-27
Identities = 80/86 (93%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 4 cagcaagaaaaatgagggacttttaggggcagctgtgttttattaacccagtcataatgc 63
||||||||||||||||||||||| ||||||||||||||||| | || ||||||||||||
Sbjct: 15 cagcaagaaaaatgagggactttcaggggcagctgtgtttt-ctgactcagtcataatgc 73
Query: 64 ccctaaaaatccttattgctcttgca 89
|||||||||||||||||| |||||||
Sbjct: 74 ccctaaaaatccttattgttcttgca 99
>32037_mmu-mir-365-2:mirbase
Length = 112
Score = 107 bits (54), Expect = 1e-24
Identities = 79/86 (91%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 4 cagcaagaaaaatgagggacttttaggggcagctgtgttttattaacccagtcataatgc 63
||||||||||||||||||||||| |||||||||||||||| | | | ||||||||||||
Sbjct: 15 cagcaagaaaaatgagggactttcaggggcagctgtgtttcctga-ctcagtcataatgc 73
Query: 64 ccctaaaaatccttattgctcttgca 89
|||||||||||||||||| |||||||
Sbjct: 74 ccctaaaaatccttattgttcttgca 99
>32883_rno-mir-365:mirbase
Length = 86
Score = 107 bits (54), Expect = 1e-24
Identities = 79/86 (91%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 4 cagcaagaaaaatgagggacttttaggggcagctgtgttttattaacccagtcataatgc 63
||||||||||||||||||||||| |||||||||||||||| | | | ||||||||||||
Sbjct: 2 cagcaagaaaaatgagggactttcaggggcagctgtgtttcctga-ctcagtcataatgc 60
Query: 64 ccctaaaaatccttattgctcttgca 89
|||||||||||||||||| |||||||
Sbjct: 61 ccctaaaaatccttattgttcttgca 86
>34073_ssc-mir-365-2:mirbase
Length = 80
Score = 101 bits (51), Expect = 9e-23
Identities = 73/79 (92%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 11 aaaaatgagggacttttaggggcagctgtgttttattaacccagtcataatgcccctaaa 70
|||||||||||||||| ||||||||||||||||| | | | |||||||||||||||||||
Sbjct: 1 aaaaatgagggactttcaggggcagctgtgttttctga-ctcagtcataatgcccctaaa 59
Query: 71 aatccttattgctcttgca 89
||||||||||| |||||||
Sbjct: 60 aatccttattgttcttgca 78
>34074_ssc-mir-365-2:mirbase
Length = 80
Score = 101 bits (51), Expect = 9e-23
Identities = 73/79 (92%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 11 aaaaatgagggacttttaggggcagctgtgttttattaacccagtcataatgcccctaaa 70
|||||||||||||||| ||||||||||||||||| | | | |||||||||||||||||||
Sbjct: 1 aaaaatgagggactttcaggggcagctgtgttttctga-ctcagtcataatgcccctaaa 59
Query: 71 aatccttattgctcttgca 89
||||||||||| |||||||
Sbjct: 60 aatccttattgttcttgca 78
>30343_ptr-mir-365-2:mirbase
Length = 110
Score = 89.7 bits (45), Expect = 3e-19
Identities = 76/85 (89%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 5 agcaagaaaaatgagggacttttaggggcagctgtgttttattaacccagtcataatgcc 64
|||||||||||||||||||||| |||||||||||||||| | || |||| |||||||
Sbjct: 16 agcaagaaaaatgagggactttctggggcagctgtgtttt-ctgacttagtcttaatgcc 74
Query: 65 cctaaaaatccttattgctcttgca 89
||||||||||||||||| |||||||
Sbjct: 75 cctaaaaatccttattgttcttgca 99
>27146_eca-mir-365:mirbase
Length = 66
Score = 85.7 bits (43), Expect = 5e-18
Identities = 62/67 (92%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 14 aatgagggacttttaggggcagctgtgttttattaacccagtcataatgcccctaaaaat 73
||||||||||||| ||||||||||||||||| | | | ||||||||||||||||||||||
Sbjct: 1 aatgagggactttcaggggcagctgtgttttctga-ctcagtcataatgcccctaaaaat 59
Query: 74 ccttatt 80
|||||||
Sbjct: 60 ccttatt 66
>26021_gga-mir-365-1:mirbase
Length = 85
Score = 83.8 bits (42), Expect = 2e-17
Identities = 69/78 (88%)
Strand = Plus / Plus
Query: 12 aaaatgagggacttttaggggcagctgtgttttattaacccagtcataatgcccctaaaa 71
|||||||||||||||| ||||||| ||||||| | || | |||||||||||||||||
Sbjct: 8 aaaatgagggacttttgggggcagatgtgtttccattacactatcataatgcccctaaaa 67
Query: 72 atccttattgctcttgca 89
||||||||||||||||||
Sbjct: 68 atccttattgctcttgca 85
>27445_mdo-mir-365:mirbase
Length = 87
Score = 83.8 bits (42), Expect = 2e-17
Identities = 69/78 (88%)
Strand = Plus / Plus
Query: 12 aaaatgagggacttttaggggcagctgtgttttattaacccagtcataatgcccctaaaa 71
|||||||||||||||| ||||||| ||||||| | || | |||||||||||||||||
Sbjct: 9 aaaatgagggacttttgggggcagatgtgtttccattacactatcataatgcccctaaaa 68
Query: 72 atccttattgctcttgca 89
||||||||||||||||||
Sbjct: 69 atccttattgctcttgca 86
>25851_xtr-mir-365-1:mirbase
Length = 86
Score = 75.8 bits (38), Expect = 5e-15
Identities = 68/78 (87%)
Strand = Plus / Plus
Query: 12 aaaatgagggacttttaggggcagctgtgttttattaacccagtcataatgcccctaaaa 71
|||||||||||||||| ||||||| ||||||| | | || | ||||||||||||||||
Sbjct: 9 aaaatgagggacttttgggggcagatgtgtttcacttacactaccataatgcccctaaaa 68
Query: 72 atccttattgctcttgca 89
|||||||||| |||||||
Sbjct: 69 atccttattgttcttgca 86
>26814_cfa-mir-365-1:mirbase
Length = 87
Score = 75.8 bits (38), Expect = 5e-15
Identities = 68/78 (87%)
Strand = Plus / Plus
Query: 12 aaaatgagggacttttaggggcagctgtgttttattaacccagtcataatgcccctaaaa 71
|||||||||||||||| ||||||| ||||||| | | | |||||||||||||||||
Sbjct: 10 aaaatgagggacttttgggggcagatgtgtttccattccactatcataatgcccctaaaa 69
Query: 72 atccttattgctcttgca 89
||||||||||||||||||
Sbjct: 70 atccttattgctcttgca 87
>27147_eca-mir-365-2:mirbase
Length = 87
Score = 75.8 bits (38), Expect = 5e-15
Identities = 68/78 (87%)
Strand = Plus / Plus
Query: 12 aaaatgagggacttttaggggcagctgtgttttattaacccagtcataatgcccctaaaa 71
|||||||||||||||| ||||||| ||||||| | | | |||||||||||||||||
Sbjct: 10 aaaatgagggacttttgggggcagatgtgtttccattccactatcataatgcccctaaaa 69
Query: 72 atccttattgctcttgca 89
||||||||||||||||||
Sbjct: 70 atccttattgctcttgca 87
>27864_mml-mir-365-1:mirbase
Length = 87
Score = 75.8 bits (38), Expect = 5e-15
Identities = 68/78 (87%)
Strand = Plus / Plus
Query: 12 aaaatgagggacttttaggggcagctgtgttttattaacccagtcataatgcccctaaaa 71
|||||||||||||||| ||||||| ||||||| | | | |||||||||||||||||
Sbjct: 10 aaaatgagggacttttgggggcagatgtgtttccattccactatcataatgcccctaaaa 69
Query: 72 atccttattgctcttgca 89
||||||||||||||||||
Sbjct: 70 atccttattgctcttgca 87
>28601_hsa-mir-365-1:mirbase
Length = 87
Score = 75.8 bits (38), Expect = 5e-15
Identities = 68/78 (87%)
Strand = Plus / Plus
Query: 12 aaaatgagggacttttaggggcagctgtgttttattaacccagtcataatgcccctaaaa 71
|||||||||||||||| ||||||| ||||||| | | | |||||||||||||||||
Sbjct: 10 aaaatgagggacttttgggggcagatgtgtttccattccactatcataatgcccctaaaa 69
Query: 72 atccttattgctcttgca 89
||||||||||||||||||
Sbjct: 70 atccttattgctcttgca 87
>30342_ptr-mir-365-1:mirbase
Length = 86
Score = 75.8 bits (38), Expect = 5e-15
Identities = 68/78 (87%)
Strand = Plus / Plus
Query: 12 aaaatgagggacttttaggggcagctgtgttttattaacccagtcataatgcccctaaaa 71
|||||||||||||||| ||||||| ||||||| | | | |||||||||||||||||
Sbjct: 9 aaaatgagggacttttgggggcagatgtgtttccattccactatcataatgcccctaaaa 68
Query: 72 atccttattgctcttgca 89
||||||||||||||||||
Sbjct: 69 atccttattgctcttgca 86
>30968_ppy-mir-365-1:mirbase
Length = 87
Score = 75.8 bits (38), Expect = 5e-15
Identities = 68/78 (87%)
Strand = Plus / Plus
Query: 12 aaaatgagggacttttaggggcagctgtgttttattaacccagtcataatgcccctaaaa 71
|||||||||||||||| ||||||| ||||||| | | | |||||||||||||||||
Sbjct: 10 aaaatgagggacttttgggggcagatgtgtttccattccactatcataatgcccctaaaa 69
Query: 72 atccttattgctcttgca 89
||||||||||||||||||
Sbjct: 70 atccttattgctcttgca 87
>32036_mmu-mir-365-1:mirbase
Length = 87
Score = 75.8 bits (38), Expect = 5e-15
Identities = 68/78 (87%)
Strand = Plus / Plus
Query: 12 aaaatgagggacttttaggggcagctgtgttttattaacccagtcataatgcccctaaaa 71
|||||||||||||||| ||||||| ||||||| | | | |||||||||||||||||
Sbjct: 10 aaaatgagggacttttgggggcagatgtgtttccattccgctatcataatgcccctaaaa 69
Query: 72 atccttattgctcttgca 89
||||||||||||||||||
Sbjct: 70 atccttattgctcttgca 87
>33338_bta-mir-365:mirbase
Length = 87
Score = 75.8 bits (38), Expect = 5e-15
Identities = 68/78 (87%)
Strand = Plus / Plus
Query: 12 aaaatgagggacttttaggggcagctgtgttttattaacccagtcataatgcccctaaaa 71
|||||||||||||||| ||||||| ||||||| | | | |||||||||||||||||
Sbjct: 10 aaaatgagggacttttgggggcagatgtgtttgcattccactatcataatgcccctaaaa 69
Query: 72 atccttattgctcttgca 89
||||||||||||||||||
Sbjct: 70 atccttattgctcttgca 87
>33339_bta-mir-365:mirbase
Length = 87
Score = 75.8 bits (38), Expect = 5e-15
Identities = 68/78 (87%)
Strand = Plus / Plus
Query: 12 aaaatgagggacttttaggggcagctgtgttttattaacccagtcataatgcccctaaaa 71
|||||||||||||||| ||||||| ||||||| | | | |||||||||||||||||
Sbjct: 10 aaaatgagggacttttgggggcagatgtgtttgcattccactatcataatgcccctaaaa 69
Query: 72 atccttattgctcttgca 89
||||||||||||||||||
Sbjct: 70 atccttattgctcttgca 87
>31549_oan-mir-365:mirbase
Length = 83
Score = 73.8 bits (37), Expect = 2e-14
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 12 aaaatgagggacttttaggggcagctgtgttttattaacccagtcataatgcccctaaaa 71
|||||||||||||||| ||||||| ||||||| | | | |||||||||||||||||
Sbjct: 7 aaaatgagggacttttgggggcagatgtgtttccattgcactatcataatgcccctaaaa 66
Query: 72 atccttattgctcttgc 88
|||||||||||||||||
Sbjct: 67 atccttattgctcttgc 83
>26526_tgu-mir-365-1:mirbase
Length = 72
Score = 71.9 bits (36), Expect = 8e-14
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 18 agggacttttaggggcagctgtgttttattaacccagtcataatgcccctaaaaatcctt 77
|||||||||| ||||||| ||||||| | || | |||||||||||||||||||||||
Sbjct: 1 agggacttttgggggcagatgtgtttccattacactatcataatgcccctaaaaatcctt 60
Query: 78 attgctcttgca 89
||||||||||||
Sbjct: 61 attgctcttgca 72
>34394_dre-mir-365-1:mirbase
Length = 89
Score = 69.9 bits (35), Expect = 3e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 55 tcataatgcccctaaaaatccttattgctcttgca 89
|||||||||||||||||||||||||||||||||||
Sbjct: 52 tcataatgcccctaaaaatccttattgctcttgca 86
>34072_ssc-mir-365-1:mirbase
Length = 80
Score = 65.9 bits (33), Expect = 5e-12
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 12 aaaatgagggacttttaggggcagctgtgttttattaacccagtcataatgcccctaaaa 71
|||||||||||||||| ||||||| ||||||| | | | |||||||||||||||||
Sbjct: 8 aaaatgagggacttttgggggcagatgtgtttccattccactatcataatgcccctaaaa 67
Query: 72 atccttattgctc 84
|||||||||||||
Sbjct: 68 atccttattgctc 80
