miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>34397_dre-mir-365-4:mirbase
Length = 99
Score = 196 bits (99), Expect = 2e-51
Identities = 99/99 (100%)
Strand = Plus / Plus
Query: 1 aagtcagcaagaaaagtgagggacttttaggggcagctgtgttatactgacccagtcata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aagtcagcaagaaaagtgagggacttttaggggcagctgtgttatactgacccagtcata 60
Query: 61 atgcccctaaaaatccttattgctcttgcagtgctcaac 99
|||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atgcccctaaaaatccttattgctcttgcagtgctcaac 99
>34650_fru-mir-365:mirbase
Length = 95
Score = 147 bits (74), Expect = 2e-36
Identities = 83/86 (96%)
Strand = Plus / Plus
Query: 5 cagcaagaaaagtgagggacttttaggggcagctgtgttatactgacccagtcataatgc 64
||||||||||||||||||||||||||||||||||||||| || | |||||||||||||||
Sbjct: 1 cagcaagaaaagtgagggacttttaggggcagctgtgttttattaacccagtcataatgc 60
Query: 65 ccctaaaaatccttattgctcttgca 90
||||||||||||||||||||||||||
Sbjct: 61 ccctaaaaatccttattgctcttgca 86
>34798_tni-mir-365:mirbase
Length = 92
Score = 147 bits (74), Expect = 2e-36
Identities = 83/86 (96%)
Strand = Plus / Plus
Query: 5 cagcaagaaaagtgagggacttttaggggcagctgtgttatactgacccagtcataatgc 64
||||||||||||||||||||||||||||||||||||||| || | |||||||||||||||
Sbjct: 1 cagcaagaaaagtgagggacttttaggggcagctgtgttttattaacccagtcataatgc 60
Query: 65 ccctaaaaatccttattgctcttgca 90
||||||||||||||||||||||||||
Sbjct: 61 ccctaaaaatccttattgctcttgca 86
>34395_dre-mir-365-2:mirbase
Length = 98
Score = 139 bits (70), Expect = 4e-34
Identities = 82/86 (95%)
Strand = Plus / Plus
Query: 5 cagcaagaaaagtgagggacttttaggggcagctgtgttatactgacccagtcataatgc 64
||||||||||| ||||||||||||||||||||||||||| || | |||||||||||||||
Sbjct: 4 cagcaagaaaaatgagggacttttaggggcagctgtgttttattaacccagtcataatgc 63
Query: 65 ccctaaaaatccttattgctcttgca 90
||||||||||||||||||||||||||
Sbjct: 64 ccctaaaaatccttattgctcttgca 89
>26022_gga-mir-365-2:mirbase
Length = 96
Score = 131 bits (66), Expect = 1e-31
Identities = 81/86 (94%)
Strand = Plus / Plus
Query: 5 cagcaagaaaagtgagggacttttaggggcagctgtgttatactgacccagtcataatgc 64
||||||||||| ||||||||||| ||||||||||||||| |||| |||||||||||||||
Sbjct: 3 cagcaagaaaaatgagggactttcaggggcagctgtgttttactaacccagtcataatgc 62
Query: 65 ccctaaaaatccttattgctcttgca 90
|||||||||||||||||| |||||||
Sbjct: 63 ccctaaaaatccttattgttcttgca 88
>26527_tgu-mir-365-2:mirbase
Length = 112
Score = 131 bits (66), Expect = 1e-31
Identities = 81/86 (94%)
Strand = Plus / Plus
Query: 5 cagcaagaaaagtgagggacttttaggggcagctgtgttatactgacccagtcataatgc 64
||||||||||| ||||||||||| ||||||||||||||| |||| |||||||||||||||
Sbjct: 27 cagcaagaaaaatgagggactttcaggggcagctgtgttttactaacccagtcataatgc 86
Query: 65 ccctaaaaatccttattgctcttgca 90
|||||||||||||||||| |||||||
Sbjct: 87 ccctaaaaatccttattgttcttgca 112
>26815_cfa-mir-365-2:mirbase
Length = 111
Score = 121 bits (61), Expect = 1e-28
Identities = 83/89 (93%), Gaps = 1/89 (1%)
Strand = Plus / Plus
Query: 5 cagcaagaaaagtgagggacttttaggggcagctgtgttatactgacccagtcataatgc 64
||||||||||| ||||||||||| ||||||||||||||| | ||||| ||||||||||||
Sbjct: 15 cagcaagaaaaatgagggactttcaggggcagctgtgtttt-ctgactcagtcataatgc 73
Query: 65 ccctaaaaatccttattgctcttgcagtg 93
|||||||||||||||||| ||||||||||
Sbjct: 74 ccctaaaaatccttattgttcttgcagtg 102
>27865_mml-mir-365-2:mirbase
Length = 111
Score = 121 bits (61), Expect = 1e-28
Identities = 83/89 (93%), Gaps = 1/89 (1%)
Strand = Plus / Plus
Query: 5 cagcaagaaaagtgagggacttttaggggcagctgtgttatactgacccagtcataatgc 64
||||||||||| ||||||||||| ||||||||||||||| | ||||| ||||||||||||
Sbjct: 15 cagcaagaaaaatgagggactttcaggggcagctgtgtttt-ctgactcagtcataatgc 73
Query: 65 ccctaaaaatccttattgctcttgcagtg 93
|||||||||||||||||| ||||||||||
Sbjct: 74 ccctaaaaatccttattgttcttgcagtg 102
>28602_hsa-mir-365-2:mirbase
Length = 111
Score = 121 bits (61), Expect = 1e-28
Identities = 83/89 (93%), Gaps = 1/89 (1%)
Strand = Plus / Plus
Query: 5 cagcaagaaaagtgagggacttttaggggcagctgtgttatactgacccagtcataatgc 64
||||||||||| ||||||||||| ||||||||||||||| | ||||| ||||||||||||
Sbjct: 15 cagcaagaaaaatgagggactttcaggggcagctgtgtttt-ctgactcagtcataatgc 73
Query: 65 ccctaaaaatccttattgctcttgcagtg 93
|||||||||||||||||| ||||||||||
Sbjct: 74 ccctaaaaatccttattgttcttgcagtg 102
>30969_ppy-mir-365-2:mirbase
Length = 111
Score = 121 bits (61), Expect = 1e-28
Identities = 83/89 (93%), Gaps = 1/89 (1%)
Strand = Plus / Plus
Query: 5 cagcaagaaaagtgagggacttttaggggcagctgtgttatactgacccagtcataatgc 64
||||||||||| ||||||||||| ||||||||||||||| | ||||| ||||||||||||
Sbjct: 15 cagcaagaaaaatgagggactttcaggggcagctgtgtttt-ctgactcagtcataatgc 73
Query: 65 ccctaaaaatccttattgctcttgcagtg 93
|||||||||||||||||| ||||||||||
Sbjct: 74 ccctaaaaatccttattgttcttgcagtg 102
>32037_mmu-mir-365-2:mirbase
Length = 112
Score = 121 bits (61), Expect = 1e-28
Identities = 83/89 (93%), Gaps = 1/89 (1%)
Strand = Plus / Plus
Query: 5 cagcaagaaaagtgagggacttttaggggcagctgtgttatactgacccagtcataatgc 64
||||||||||| ||||||||||| ||||||||||||||| | ||||| ||||||||||||
Sbjct: 15 cagcaagaaaaatgagggactttcaggggcagctgtgtt-tcctgactcagtcataatgc 73
Query: 65 ccctaaaaatccttattgctcttgcagtg 93
|||||||||||||||||| ||||||||||
Sbjct: 74 ccctaaaaatccttattgttcttgcagtg 102
>33340_bta-mir-365-2:mirbase
Length = 111
Score = 121 bits (61), Expect = 1e-28
Identities = 83/89 (93%), Gaps = 1/89 (1%)
Strand = Plus / Plus
Query: 5 cagcaagaaaagtgagggacttttaggggcagctgtgttatactgacccagtcataatgc 64
||||||||||| ||||||||||| ||||||||||||||| | ||||| ||||||||||||
Sbjct: 15 cagcaagaaaaatgagggactttcaggggcagctgtgtttt-ctgactcagtcataatgc 73
Query: 65 ccctaaaaatccttattgctcttgcagtg 93
|||||||||||||||||| ||||||||||
Sbjct: 74 ccctaaaaatccttattgttcttgcagtg 102
>32883_rno-mir-365:mirbase
Length = 86
Score = 115 bits (58), Expect = 6e-27
Identities = 80/86 (93%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 5 cagcaagaaaagtgagggacttttaggggcagctgtgttatactgacccagtcataatgc 64
||||||||||| ||||||||||| ||||||||||||||| | ||||| ||||||||||||
Sbjct: 2 cagcaagaaaaatgagggactttcaggggcagctgtgtt-tcctgactcagtcataatgc 60
Query: 65 ccctaaaaatccttattgctcttgca 90
|||||||||||||||||| |||||||
Sbjct: 61 ccctaaaaatccttattgttcttgca 86
>34073_ssc-mir-365-2:mirbase
Length = 80
Score = 105 bits (53), Expect = 6e-24
Identities = 75/81 (92%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 12 aaaagtgagggacttttaggggcagctgtgttatactgacccagtcataatgcccctaaa 71
|||| ||||||||||| ||||||||||||||| | ||||| |||||||||||||||||||
Sbjct: 1 aaaaatgagggactttcaggggcagctgtgtttt-ctgactcagtcataatgcccctaaa 59
Query: 72 aatccttattgctcttgcagt 92
||||||||||| |||||||||
Sbjct: 60 aatccttattgttcttgcagt 80
>34074_ssc-mir-365-2:mirbase
Length = 80
Score = 105 bits (53), Expect = 6e-24
Identities = 75/81 (92%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 12 aaaagtgagggacttttaggggcagctgtgttatactgacccagtcataatgcccctaaa 71
|||| ||||||||||| ||||||||||||||| | ||||| |||||||||||||||||||
Sbjct: 1 aaaaatgagggactttcaggggcagctgtgtttt-ctgactcagtcataatgcccctaaa 59
Query: 72 aatccttattgctcttgcagt 92
||||||||||| |||||||||
Sbjct: 60 aatccttattgttcttgcagt 80
>30343_ptr-mir-365-2:mirbase
Length = 110
Score = 95.6 bits (48), Expect = 6e-21
Identities = 79/88 (89%), Gaps = 1/88 (1%)
Strand = Plus / Plus
Query: 6 agcaagaaaagtgagggacttttaggggcagctgtgttatactgacccagtcataatgcc 65
|||||||||| ||||||||||| |||||||||||||| | ||||| |||| |||||||
Sbjct: 16 agcaagaaaaatgagggactttctggggcagctgtgtttt-ctgacttagtcttaatgcc 74
Query: 66 cctaaaaatccttattgctcttgcagtg 93
||||||||||||||||| ||||||||||
Sbjct: 75 cctaaaaatccttattgttcttgcagtg 102
>27146_eca-mir-365:mirbase
Length = 66
Score = 89.7 bits (45), Expect = 4e-19
Identities = 61/65 (93%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 17 tgagggacttttaggggcagctgtgttatactgacccagtcataatgcccctaaaaatcc 76
||||||||||| ||||||||||||||| | ||||| ||||||||||||||||||||||||
Sbjct: 3 tgagggactttcaggggcagctgtgtttt-ctgactcagtcataatgcccctaaaaatcc 61
Query: 77 ttatt 81
|||||
Sbjct: 62 ttatt 66
>27445_mdo-mir-365:mirbase
Length = 87
Score = 71.9 bits (36), Expect = 8e-14
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 56 tcataatgcccctaaaaatccttattgctcttgcag 91
||||||||||||||||||||||||||||||||||||
Sbjct: 52 tcataatgcccctaaaaatccttattgctcttgcag 87
>26021_gga-mir-365-1:mirbase
Length = 85
Score = 69.9 bits (35), Expect = 3e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 56 tcataatgcccctaaaaatccttattgctcttgca 90
|||||||||||||||||||||||||||||||||||
Sbjct: 51 tcataatgcccctaaaaatccttattgctcttgca 85
>26526_tgu-mir-365-1:mirbase
Length = 72
Score = 69.9 bits (35), Expect = 3e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 56 tcataatgcccctaaaaatccttattgctcttgca 90
|||||||||||||||||||||||||||||||||||
Sbjct: 38 tcataatgcccctaaaaatccttattgctcttgca 72
>26814_cfa-mir-365-1:mirbase
Length = 87
Score = 69.9 bits (35), Expect = 3e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 56 tcataatgcccctaaaaatccttattgctcttgca 90
|||||||||||||||||||||||||||||||||||
Sbjct: 53 tcataatgcccctaaaaatccttattgctcttgca 87
>27147_eca-mir-365-2:mirbase
Length = 87
Score = 69.9 bits (35), Expect = 3e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 56 tcataatgcccctaaaaatccttattgctcttgca 90
|||||||||||||||||||||||||||||||||||
Sbjct: 53 tcataatgcccctaaaaatccttattgctcttgca 87
>27864_mml-mir-365-1:mirbase
Length = 87
Score = 69.9 bits (35), Expect = 3e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 56 tcataatgcccctaaaaatccttattgctcttgca 90
|||||||||||||||||||||||||||||||||||
Sbjct: 53 tcataatgcccctaaaaatccttattgctcttgca 87
>28601_hsa-mir-365-1:mirbase
Length = 87
Score = 69.9 bits (35), Expect = 3e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 56 tcataatgcccctaaaaatccttattgctcttgca 90
|||||||||||||||||||||||||||||||||||
Sbjct: 53 tcataatgcccctaaaaatccttattgctcttgca 87
>30342_ptr-mir-365-1:mirbase
Length = 86
Score = 69.9 bits (35), Expect = 3e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 56 tcataatgcccctaaaaatccttattgctcttgca 90
|||||||||||||||||||||||||||||||||||
Sbjct: 52 tcataatgcccctaaaaatccttattgctcttgca 86
>30968_ppy-mir-365-1:mirbase
Length = 87
Score = 69.9 bits (35), Expect = 3e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 56 tcataatgcccctaaaaatccttattgctcttgca 90
|||||||||||||||||||||||||||||||||||
Sbjct: 53 tcataatgcccctaaaaatccttattgctcttgca 87
>32036_mmu-mir-365-1:mirbase
Length = 87
Score = 69.9 bits (35), Expect = 3e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 56 tcataatgcccctaaaaatccttattgctcttgca 90
|||||||||||||||||||||||||||||||||||
Sbjct: 53 tcataatgcccctaaaaatccttattgctcttgca 87
>33338_bta-mir-365:mirbase
Length = 87
Score = 69.9 bits (35), Expect = 3e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 56 tcataatgcccctaaaaatccttattgctcttgca 90
|||||||||||||||||||||||||||||||||||
Sbjct: 53 tcataatgcccctaaaaatccttattgctcttgca 87
>33339_bta-mir-365:mirbase
Length = 87
Score = 69.9 bits (35), Expect = 3e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 56 tcataatgcccctaaaaatccttattgctcttgca 90
|||||||||||||||||||||||||||||||||||
Sbjct: 53 tcataatgcccctaaaaatccttattgctcttgca 87
>34394_dre-mir-365-1:mirbase
Length = 89
Score = 69.9 bits (35), Expect = 3e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 56 tcataatgcccctaaaaatccttattgctcttgca 90
|||||||||||||||||||||||||||||||||||
Sbjct: 52 tcataatgcccctaaaaatccttattgctcttgca 86
>25851_xtr-mir-365-1:mirbase
Length = 86
Score = 67.9 bits (34), Expect = 1e-12
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 17 tgagggacttttaggggcagctgtgttatactgacccagtcataatgcccctaaaaatcc 76
|||||||||||| ||||||| |||||| ||| || | ||||||||||||||||||||
Sbjct: 13 tgagggacttttgggggcagatgtgtttcacttacactaccataatgcccctaaaaatcc 72
Query: 77 ttattgctcttgca 90
|||||| |||||||
Sbjct: 73 ttattgttcttgca 86
>31549_oan-mir-365:mirbase
Length = 83
Score = 67.9 bits (34), Expect = 1e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 56 tcataatgcccctaaaaatccttattgctcttgc 89
||||||||||||||||||||||||||||||||||
Sbjct: 50 tcataatgcccctaaaaatccttattgctcttgc 83
>34072_ssc-mir-365-1:mirbase
Length = 80
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 56 tcataatgcccctaaaaatccttattgctc 85
||||||||||||||||||||||||||||||
Sbjct: 51 tcataatgcccctaaaaatccttattgctc 80
