miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01413;miR-430;CAAK05053789.1/773-681 7955:Danio rerio
(zebrafish)
Length = 93
Score = 137 bits (69), Expect = 2e-32
Identities = 75/77 (97%)
Strand = Plus / Plus
Query: 1 cagttgaggtcaactctaactttagcatctttcttttaagcatagtagaaagtgctatca 60
||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 12 cagttgacgtcaactctaactttagcatctttcttttaagcagagtagaaagtgctatca 71
Query: 61 agttggggtagatgttt 77
|||||||||||||||||
Sbjct: 72 agttggggtagatgttt 88
>RF01413;miR-430;CAAK05025327.1/1467-1375 7955:Danio rerio
(zebrafish)
Length = 93
Score = 137 bits (69), Expect = 2e-32
Identities = 75/77 (97%)
Strand = Plus / Plus
Query: 1 cagttgaggtcaactctaactttagcatctttcttttaagcatagtagaaagtgctatca 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 12 cagttgaggtcaactctaactttagcatctttcttttaagcaaagtagaaagtgctatca 71
Query: 61 agttggggtagatgttt 77
||| |||||||||||||
Sbjct: 72 agtaggggtagatgttt 88
>RF01413;miR-430;CAAK05053789.1/183-91 7955:Danio rerio
(zebrafish)
Length = 93
Score = 121 bits (61), Expect = 1e-27
Identities = 73/77 (94%)
Strand = Plus / Plus
Query: 1 cagttgaggtcaactctaactttagcatctttcttttaagcatagtagaaagtgctatca 60
||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||
Sbjct: 12 cagttgacatcaactctaactttagcatctttcttttaagcaaagtaaaaagtgctatca 71
Query: 61 agttggggtagatgttt 77
|||||||||||||||||
Sbjct: 72 agttggggtagatgttt 88
>RF01413;miR-430;CAAK05031383.1/2798-2709 7955:Danio rerio
(zebrafish)
Length = 90
Score = 97.6 bits (49), Expect = 2e-20
Identities = 61/65 (93%)
Strand = Plus / Plus
Query: 9 gtcaactctaactttagcatctttcttttaagcatagtagaaagtgctatcaagttgggg 68
|||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||
Sbjct: 20 gtcaactctaactttagcattgttcttttaagcaaagtagaaagtgctatcaatttgggg 79
Query: 69 tagat 73
|||||
Sbjct: 80 tagat 84
