miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01413;miR-430;CAAK05025327.1/1467-1375 7955:Danio rerio
(zebrafish)
Length = 93
Score = 147 bits (74), Expect = 2e-35
Identities = 77/78 (98%)
Strand = Plus / Plus
Query: 1 cagttgaggtcaactctaactttagcatctttcttttaagcaaagtagaaagtgctatca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 cagttgaggtcaactctaactttagcatctttcttttaagcaaagtagaaagtgctatca 71
Query: 61 agttggggtagatgtttg 78
||| ||||||||||||||
Sbjct: 72 agtaggggtagatgtttg 89
>RF01413;miR-430;CAAK05053789.1/773-681 7955:Danio rerio
(zebrafish)
Length = 93
Score = 139 bits (70), Expect = 6e-33
Identities = 76/78 (97%)
Strand = Plus / Plus
Query: 1 cagttgaggtcaactctaactttagcatctttcttttaagcaaagtagaaagtgctatca 60
||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 12 cagttgacgtcaactctaactttagcatctttcttttaagcagagtagaaagtgctatca 71
Query: 61 agttggggtagatgtttg 78
||||||||||||||||||
Sbjct: 72 agttggggtagatgtttg 89
>RF01413;miR-430;CAAK05053789.1/183-91 7955:Danio rerio
(zebrafish)
Length = 93
Score = 131 bits (66), Expect = 1e-30
Identities = 75/78 (96%)
Strand = Plus / Plus
Query: 1 cagttgaggtcaactctaactttagcatctttcttttaagcaaagtagaaagtgctatca 60
||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 12 cagttgacatcaactctaactttagcatctttcttttaagcaaagtaaaaagtgctatca 71
Query: 61 agttggggtagatgtttg 78
||||||||||||||||||
Sbjct: 72 agttggggtagatgtttg 89
>RF01413;miR-430;CAAK05031383.1/2798-2709 7955:Danio rerio
(zebrafish)
Length = 90
Score = 105 bits (53), Expect = 8e-23
Identities = 62/65 (95%)
Strand = Plus / Plus
Query: 9 gtcaactctaactttagcatctttcttttaagcaaagtagaaagtgctatcaagttgggg 68
|||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||
Sbjct: 20 gtcaactctaactttagcattgttcttttaagcaaagtagaaagtgctatcaatttgggg 79
Query: 69 tagat 73
|||||
Sbjct: 80 tagat 84
