miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>34448_dre-mir-430c-1:mirbase
          Length = 96

 Score =  145 bits (73), Expect = 5e-36
 Identities = 73/73 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  attaagatcacttcaaacaggagcattgatttgtcctttgttcataagtgcttctctttg 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16 attaagatcacttcaaacaggagcattgatttgtcctttgttcataagtgcttctctttg 75

                       
Query: 61 gggtagttttaat 73
          |||||||||||||
Sbjct: 76 gggtagttttaat 88




>34449_dre-mir-430c-10:mirbase
          Length = 82

 Score =  145 bits (73), Expect = 5e-36
 Identities = 73/73 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  attaagatcacttcaaacaggagcattgatttgtcctttgttcataagtgcttctctttg 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  attaagatcacttcaaacaggagcattgatttgtcctttgttcataagtgcttctctttg 60

                       
Query: 61 gggtagttttaat 73
          |||||||||||||
Sbjct: 61 gggtagttttaat 73




>34450_dre-mir-430c-11:mirbase
          Length = 82

 Score =  145 bits (73), Expect = 5e-36
 Identities = 73/73 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  attaagatcacttcaaacaggagcattgatttgtcctttgttcataagtgcttctctttg 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  attaagatcacttcaaacaggagcattgatttgtcctttgttcataagtgcttctctttg 60

                       
Query: 61 gggtagttttaat 73
          |||||||||||||
Sbjct: 61 gggtagttttaat 73




>34451_dre-mir-430c-12:mirbase
          Length = 82

 Score =  145 bits (73), Expect = 5e-36
 Identities = 73/73 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  attaagatcacttcaaacaggagcattgatttgtcctttgttcataagtgcttctctttg 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  attaagatcacttcaaacaggagcattgatttgtcctttgttcataagtgcttctctttg 60

                       
Query: 61 gggtagttttaat 73
          |||||||||||||
Sbjct: 61 gggtagttttaat 73




>34452_dre-mir-430c-13:mirbase
          Length = 82

 Score =  145 bits (73), Expect = 5e-36
 Identities = 73/73 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  attaagatcacttcaaacaggagcattgatttgtcctttgttcataagtgcttctctttg 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  attaagatcacttcaaacaggagcattgatttgtcctttgttcataagtgcttctctttg 60

                       
Query: 61 gggtagttttaat 73
          |||||||||||||
Sbjct: 61 gggtagttttaat 73




>34453_dre-mir-430c-14:mirbase
          Length = 82

 Score =  145 bits (73), Expect = 5e-36
 Identities = 73/73 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  attaagatcacttcaaacaggagcattgatttgtcctttgttcataagtgcttctctttg 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  attaagatcacttcaaacaggagcattgatttgtcctttgttcataagtgcttctctttg 60

                       
Query: 61 gggtagttttaat 73
          |||||||||||||
Sbjct: 61 gggtagttttaat 73




>34454_dre-mir-430c-15:mirbase
          Length = 82

 Score =  145 bits (73), Expect = 5e-36
 Identities = 73/73 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  attaagatcacttcaaacaggagcattgatttgtcctttgttcataagtgcttctctttg 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  attaagatcacttcaaacaggagcattgatttgtcctttgttcataagtgcttctctttg 60

                       
Query: 61 gggtagttttaat 73
          |||||||||||||
Sbjct: 61 gggtagttttaat 73




>34455_dre-mir-430c-16:mirbase
          Length = 82

 Score =  145 bits (73), Expect = 5e-36
 Identities = 73/73 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  attaagatcacttcaaacaggagcattgatttgtcctttgttcataagtgcttctctttg 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  attaagatcacttcaaacaggagcattgatttgtcctttgttcataagtgcttctctttg 60

                       
Query: 61 gggtagttttaat 73
          |||||||||||||
Sbjct: 61 gggtagttttaat 73




>34456_dre-mir-430c-17:mirbase
          Length = 82

 Score =  145 bits (73), Expect = 5e-36
 Identities = 73/73 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  attaagatcacttcaaacaggagcattgatttgtcctttgttcataagtgcttctctttg 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  attaagatcacttcaaacaggagcattgatttgtcctttgttcataagtgcttctctttg 60

                       
Query: 61 gggtagttttaat 73
          |||||||||||||
Sbjct: 61 gggtagttttaat 73




>34457_dre-mir-430c-18:mirbase
          Length = 82

 Score =  145 bits (73), Expect = 5e-36
 Identities = 73/73 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  attaagatcacttcaaacaggagcattgatttgtcctttgttcataagtgcttctctttg 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  attaagatcacttcaaacaggagcattgatttgtcctttgttcataagtgcttctctttg 60

                       
Query: 61 gggtagttttaat 73
          |||||||||||||
Sbjct: 61 gggtagttttaat 73




>34458_dre-mir-430c-19:mirbase
          Length = 82

 Score =  145 bits (73), Expect = 5e-36
 Identities = 73/73 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  attaagatcacttcaaacaggagcattgatttgtcctttgttcataagtgcttctctttg 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  attaagatcacttcaaacaggagcattgatttgtcctttgttcataagtgcttctctttg 60

                       
Query: 61 gggtagttttaat 73
          |||||||||||||
Sbjct: 61 gggtagttttaat 73




>34459_dre-mir-430c-2:mirbase
          Length = 79

 Score =  145 bits (73), Expect = 5e-36
 Identities = 73/73 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  attaagatcacttcaaacaggagcattgatttgtcctttgttcataagtgcttctctttg 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4  attaagatcacttcaaacaggagcattgatttgtcctttgttcataagtgcttctctttg 63

                       
Query: 61 gggtagttttaat 73
          |||||||||||||
Sbjct: 64 gggtagttttaat 76




>34460_dre-mir-430c-20:mirbase
          Length = 82

 Score =  145 bits (73), Expect = 5e-36
 Identities = 73/73 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  attaagatcacttcaaacaggagcattgatttgtcctttgttcataagtgcttctctttg 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  attaagatcacttcaaacaggagcattgatttgtcctttgttcataagtgcttctctttg 60

                       
Query: 61 gggtagttttaat 73
          |||||||||||||
Sbjct: 61 gggtagttttaat 73




>34461_dre-mir-430c-21:mirbase
          Length = 82

 Score =  145 bits (73), Expect = 5e-36
 Identities = 73/73 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  attaagatcacttcaaacaggagcattgatttgtcctttgttcataagtgcttctctttg 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  attaagatcacttcaaacaggagcattgatttgtcctttgttcataagtgcttctctttg 60

                       
Query: 61 gggtagttttaat 73
          |||||||||||||
Sbjct: 61 gggtagttttaat 73




>34462_dre-mir-430c-3:mirbase
          Length = 79

 Score =  145 bits (73), Expect = 5e-36
 Identities = 73/73 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  attaagatcacttcaaacaggagcattgatttgtcctttgttcataagtgcttctctttg 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4  attaagatcacttcaaacaggagcattgatttgtcctttgttcataagtgcttctctttg 63

                       
Query: 61 gggtagttttaat 73
          |||||||||||||
Sbjct: 64 gggtagttttaat 76




>34463_dre-mir-430c-4:mirbase
          Length = 79

 Score =  145 bits (73), Expect = 5e-36
 Identities = 73/73 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  attaagatcacttcaaacaggagcattgatttgtcctttgttcataagtgcttctctttg 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4  attaagatcacttcaaacaggagcattgatttgtcctttgttcataagtgcttctctttg 63

                       
Query: 61 gggtagttttaat 73
          |||||||||||||
Sbjct: 64 gggtagttttaat 76




>34464_dre-mir-430c-5:mirbase
          Length = 79

 Score =  145 bits (73), Expect = 5e-36
 Identities = 73/73 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  attaagatcacttcaaacaggagcattgatttgtcctttgttcataagtgcttctctttg 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4  attaagatcacttcaaacaggagcattgatttgtcctttgttcataagtgcttctctttg 63

                       
Query: 61 gggtagttttaat 73
          |||||||||||||
Sbjct: 64 gggtagttttaat 76




>34465_dre-mir-430c-6:mirbase
          Length = 82

 Score =  145 bits (73), Expect = 5e-36
 Identities = 73/73 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  attaagatcacttcaaacaggagcattgatttgtcctttgttcataagtgcttctctttg 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  attaagatcacttcaaacaggagcattgatttgtcctttgttcataagtgcttctctttg 60

                       
Query: 61 gggtagttttaat 73
          |||||||||||||
Sbjct: 61 gggtagttttaat 73




>34467_dre-mir-430c-8:mirbase
          Length = 82

 Score =  145 bits (73), Expect = 5e-36
 Identities = 73/73 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  attaagatcacttcaaacaggagcattgatttgtcctttgttcataagtgcttctctttg 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  attaagatcacttcaaacaggagcattgatttgtcctttgttcataagtgcttctctttg 60

                       
Query: 61 gggtagttttaat 73
          |||||||||||||
Sbjct: 61 gggtagttttaat 73




>34468_dre-mir-430c-9:mirbase
          Length = 82

 Score =  145 bits (73), Expect = 5e-36
 Identities = 73/73 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  attaagatcacttcaaacaggagcattgatttgtcctttgttcataagtgcttctctttg 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  attaagatcacttcaaacaggagcattgatttgtcctttgttcataagtgcttctctttg 60

                       
Query: 61 gggtagttttaat 73
          |||||||||||||
Sbjct: 61 gggtagttttaat 73




>34670_ola-mir-430d-1:mirbase
          Length = 87

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 45 taagtgcttctctttggggt 64
          ||||||||||||||||||||
Sbjct: 51 taagtgcttctctttggggt 70




>34671_ola-mir-430d-2:mirbase
          Length = 87

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 45 taagtgcttctctttggggt 64
          ||||||||||||||||||||
Sbjct: 51 taagtgcttctctttggggt 70




>34672_ola-mir-430d-3:mirbase
          Length = 87

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 45 taagtgcttctctttggggt 64
          ||||||||||||||||||||
Sbjct: 51 taagtgcttctctttggggt 70