miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01413;miR-430;CAAK05025327.1/1467-1375 7955:Danio rerio
(zebrafish)
Length = 93
Score = 137 bits (69), Expect = 2e-32
Identities = 78/81 (96%)
Strand = Plus / Plus
Query: 1 cagttgagatcaactctaactttagcatctttcttttaagcaaagtagaaagtgctatca 60
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 cagttgaggtcaactctaactttagcatctttcttttaagcaaagtagaaagtgctatca 71
Query: 61 aattggggtagatgtttgctg 81
| | |||||||||||||||||
Sbjct: 72 agtaggggtagatgtttgctg 92
>RF01413;miR-430;CAAK05053789.1/183-91 7955:Danio rerio
(zebrafish)
Length = 93
Score = 137 bits (69), Expect = 2e-32
Identities = 78/81 (96%)
Strand = Plus / Plus
Query: 1 cagttgagatcaactctaactttagcatctttcttttaagcaaagtagaaagtgctatca 60
||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 12 cagttgacatcaactctaactttagcatctttcttttaagcaaagtaaaaagtgctatca 71
Query: 61 aattggggtagatgtttgctg 81
| |||||||||||||||||||
Sbjct: 72 agttggggtagatgtttgctg 92
>RF01413;miR-430;CAAK05053789.1/773-681 7955:Danio rerio
(zebrafish)
Length = 93
Score = 129 bits (65), Expect = 6e-30
Identities = 77/81 (95%)
Strand = Plus / Plus
Query: 1 cagttgagatcaactctaactttagcatctttcttttaagcaaagtagaaagtgctatca 60
||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 12 cagttgacgtcaactctaactttagcatctttcttttaagcagagtagaaagtgctatca 71
Query: 61 aattggggtagatgtttgctg 81
| |||||||||||||||||||
Sbjct: 72 agttggggtagatgtttgctg 92
>RF01413;miR-430;CAAK05031383.1/2798-2709 7955:Danio rerio
(zebrafish)
Length = 90
Score = 103 bits (52), Expect = 3e-22
Identities = 61/64 (95%)
Strand = Plus / Plus
Query: 10 tcaactctaactttagcatctttcttttaagcaaagtagaaagtgctatcaaattggggt 69
||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||
Sbjct: 21 tcaactctaactttagcattgttcttttaagcaaagtagaaagtgctatcaatttggggt 80
Query: 70 agat 73
||||
Sbjct: 81 agat 84
