miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>34801_tni-mir-455:mirbase
Length = 84
Score = 125 bits (63), Expect = 7e-30
Identities = 72/75 (96%)
Strand = Plus / Plus
Query: 10 ccctgaagtgagggtatgtgcccttggactacattgtggaggccagcaccatgcagtcca 69
|||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct: 1 ccctgatgtgagggtatgtgcccttggactacatcgtggaagccagcaccatgcagtcca 60
Query: 70 tgggcatatacactt 84
|||||||||||||||
Sbjct: 61 tgggcatatacactt 75
>34476_dre-mir-455:mirbase
Length = 96
Score = 121 bits (61), Expect = 1e-28
Identities = 76/81 (93%)
Strand = Plus / Plus
Query: 17 gtgagggtatgtgcccttggactacattgtggaggccagcaccatgcagtccatgggcat 76
||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 9 gtgagggtatgtgcccttggactacatcgtggaagccagcaccatgcagtccatgggcat 68
Query: 77 atacacttacttcatggccta 97
|||||||| | ||| ||||||
Sbjct: 69 atacacttgcctcaaggccta 89
>34653_fru-mir-455:mirbase
Length = 84
Score = 121 bits (61), Expect = 1e-28
Identities = 73/77 (94%)
Strand = Plus / Plus
Query: 17 gtgagggtatgtgcccttggactacattgtggaggccagcaccatgcagtccatgggcat 76
||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 8 gtgagggtatgtgcccttggactacatcgtggaagccagcaccatgcagtccatgggcat 67
Query: 77 atacacttacttcatgg 93
|||||||| | ||||||
Sbjct: 68 atacacttgcctcatgg 84
>25863_xtr-mir-455:mirbase
Length = 87
Score = 119 bits (60), Expect = 4e-28
Identities = 66/68 (97%)
Strand = Plus / Plus
Query: 17 gtgagggtatgtgcccttggactacattgtggaggccagcaccatgcagtccatgggcat 76
||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 9 gtgagggtatgtgcccttggactacatcgtggaagccagcaccatgcagtccatgggcat 68
Query: 77 atacactt 84
||||||||
Sbjct: 69 atacactt 76
>26032_gga-mir-455:mirbase
Length = 86
Score = 119 bits (60), Expect = 4e-28
Identities = 66/68 (97%)
Strand = Plus / Plus
Query: 17 gtgagggtatgtgcccttggactacattgtggaggccagcaccatgcagtccatgggcat 76
||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 9 gtgagggtatgtgcccttggactacatcgtggaagccagcaccatgcagtccatgggcat 68
Query: 77 atacactt 84
||||||||
Sbjct: 69 atacactt 76
>26033_gga-mir-455:mirbase
Length = 86
Score = 119 bits (60), Expect = 4e-28
Identities = 66/68 (97%)
Strand = Plus / Plus
Query: 17 gtgagggtatgtgcccttggactacattgtggaggccagcaccatgcagtccatgggcat 76
||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 9 gtgagggtatgtgcccttggactacatcgtggaagccagcaccatgcagtccatgggcat 68
Query: 77 atacactt 84
||||||||
Sbjct: 69 atacactt 76
>27917_mml-mir-455:mirbase
Length = 96
Score = 113 bits (57), Expect = 3e-26
Identities = 75/81 (92%)
Strand = Plus / Plus
Query: 17 gtgagggtatgtgcccttggactacattgtggaggccagcaccatgcagtccatgggcat 76
||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 9 gtgagggtatgtgcctttggactacatcgtggaagccagcaccatgcagtccatgggcat 68
Query: 77 atacacttacttcatggccta 97
|||||||| | ||| ||||||
Sbjct: 69 atacacttgcctcaaggccta 89
>27918_mml-mir-455:mirbase
Length = 96
Score = 113 bits (57), Expect = 3e-26
Identities = 75/81 (92%)
Strand = Plus / Plus
Query: 17 gtgagggtatgtgcccttggactacattgtggaggccagcaccatgcagtccatgggcat 76
||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 9 gtgagggtatgtgcctttggactacatcgtggaagccagcaccatgcagtccatgggcat 68
Query: 77 atacacttacttcatggccta 97
|||||||| | ||| ||||||
Sbjct: 69 atacacttgcctcaaggccta 89
>28665_hsa-mir-455:mirbase
Length = 96
Score = 113 bits (57), Expect = 3e-26
Identities = 75/81 (92%)
Strand = Plus / Plus
Query: 17 gtgagggtatgtgcccttggactacattgtggaggccagcaccatgcagtccatgggcat 76
||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 9 gtgagggtatgtgcctttggactacatcgtggaagccagcaccatgcagtccatgggcat 68
Query: 77 atacacttacttcatggccta 97
|||||||| | ||| ||||||
Sbjct: 69 atacacttgcctcaaggccta 89
>28666_hsa-mir-455:mirbase
Length = 96
Score = 113 bits (57), Expect = 3e-26
Identities = 75/81 (92%)
Strand = Plus / Plus
Query: 17 gtgagggtatgtgcccttggactacattgtggaggccagcaccatgcagtccatgggcat 76
||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 9 gtgagggtatgtgcctttggactacatcgtggaagccagcaccatgcagtccatgggcat 68
Query: 77 atacacttacttcatggccta 97
|||||||| | ||| ||||||
Sbjct: 69 atacacttgcctcaaggccta 89
>30386_ptr-mir-455:mirbase
Length = 95
Score = 113 bits (57), Expect = 3e-26
Identities = 75/81 (92%)
Strand = Plus / Plus
Query: 17 gtgagggtatgtgcccttggactacattgtggaggccagcaccatgcagtccatgggcat 76
||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 8 gtgagggtatgtgcctttggactacatcgtggaagccagcaccatgcagtccatgggcat 67
Query: 77 atacacttacttcatggccta 97
|||||||| | ||| ||||||
Sbjct: 68 atacacttgcctcaaggccta 88
>31017_ppy-mir-455:mirbase
Length = 96
Score = 113 bits (57), Expect = 3e-26
Identities = 75/81 (92%)
Strand = Plus / Plus
Query: 17 gtgagggtatgtgcccttggactacattgtggaggccagcaccatgcagtccatgggcat 76
||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 9 gtgagggtatgtgcctttggactacatcgtggaagccagcaccatgcagtccatgggcat 68
Query: 77 atacacttacttcatggccta 97
|||||||| | ||| ||||||
Sbjct: 69 atacacttgcctcaaggccta 89
>31018_ppy-mir-455:mirbase
Length = 96
Score = 113 bits (57), Expect = 3e-26
Identities = 75/81 (92%)
Strand = Plus / Plus
Query: 17 gtgagggtatgtgcccttggactacattgtggaggccagcaccatgcagtccatgggcat 76
||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 9 gtgagggtatgtgcctttggactacatcgtggaagccagcaccatgcagtccatgggcat 68
Query: 77 atacacttacttcatggccta 97
|||||||| | ||| ||||||
Sbjct: 69 atacacttgcctcaaggccta 89
>33387_bta-mir-455:mirbase
Length = 89
Score = 113 bits (57), Expect = 3e-26
Identities = 75/81 (92%)
Strand = Plus / Plus
Query: 17 gtgagggtatgtgcccttggactacattgtggaggccagcaccatgcagtccatgggcat 76
||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 9 gtgagggtatgtgcctttggactacatcgtggaagccagcaccatgcagtccatgggcat 68
Query: 77 atacacttacttcatggccta 97
|||||||| | ||| ||||||
Sbjct: 69 atacacttgcctcaaggccta 89
>26534_tgu-mir-455:mirbase
Length = 71
Score = 111 bits (56), Expect = 1e-25
Identities = 62/64 (96%)
Strand = Plus / Plus
Query: 21 gggtatgtgcccttggactacattgtggaggccagcaccatgcagtccatgggcatatac 80
||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 1 gggtatgtgcccttggactacatcgtggaagccagcaccatgcagtccatgggcatatac 60
Query: 81 actt 84
||||
Sbjct: 61 actt 64
>27453_mdo-mir-455:mirbase
Length = 87
Score = 111 bits (56), Expect = 1e-25
Identities = 65/68 (95%)
Strand = Plus / Plus
Query: 17 gtgagggtatgtgcccttggactacattgtggaggccagcaccatgcagtccatgggcat 76
||||||||||||||||||||||||||| ||||| |||| |||||||||||||||||||||
Sbjct: 9 gtgagggtatgtgcccttggactacatcgtggaagccaacaccatgcagtccatgggcat 68
Query: 77 atacactt 84
||||||||
Sbjct: 69 atacactt 76
>34103_ssc-mir-455:mirbase
Length = 80
Score = 111 bits (56), Expect = 1e-25
Identities = 65/68 (95%)
Strand = Plus / Plus
Query: 17 gtgagggtatgtgcccttggactacattgtggaggccagcaccatgcagtccatgggcat 76
||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 5 gtgagggtatgtgcctttggactacatcgtggaagccagcaccatgcagtccatgggcat 64
Query: 77 atacactt 84
||||||||
Sbjct: 65 atacactt 72
>26853_cfa-mir-455:mirbase
Length = 58
Score = 91.7 bits (46), Expect = 1e-19
Identities = 55/58 (94%)
Strand = Plus / Plus
Query: 24 tatgtgcccttggactacattgtggaggccagcaccatgcagtccatgggcatataca 81
|||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 1 tatgtgcctttggactacatcgtggaagccagcaccatgcagtccatgggcatataca 58
>32920_rno-mir-455:mirbase
Length = 78
Score = 79.8 bits (40), Expect = 4e-16
Identities = 62/68 (91%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 17 gtgagggtatgtgcccttggactacattgtggaggccagcaccatgcagtccatgggcat 76
||||| ||||||||| ||||||||||| ||||| || |||||||||||||||| ||||||
Sbjct: 4 gtgagcgtatgtgcctttggactacatcgtggacgc-agcaccatgcagtccacgggcat 62
Query: 77 atacactt 84
||||||||
Sbjct: 63 atacactt 70
>32088_mmu-mir-455:mirbase
Length = 82
Score = 71.9 bits (36), Expect = 9e-14
Identities = 61/68 (89%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 17 gtgagggtatgtgcccttggactacattgtggaggccagcaccatgcagtccatgggcat 76
||||| ||||||||| ||||||||||| ||| | || |||||||||||||||| ||||||
Sbjct: 10 gtgagcgtatgtgcctttggactacatcgtgaacgc-agcaccatgcagtccacgggcat 68
Query: 77 atacactt 84
||||||||
Sbjct: 69 atacactt 76
