miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>25552_pma-mir-456:mirbase
Length = 85
Score = 69.9 bits (35), Expect = 3e-13
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 10 gtgtgcaggcatctttccagtctacatgtggatccaggagtctgcaggctggttagatgg 69
|||||||||||||||||||| ||||| |||| | || ||||||||||||||||||||
Sbjct: 10 gtgtgcaggcatctttccagcctacacgtggggtcctgattctgcaggctggttagatgg 69
Query: 70 ttgtcac 76
|||||||
Sbjct: 70 ttgtcac 76
>26034_gga-mir-456:mirbase
Length = 112
Score = 65.9 bits (33), Expect = 4e-12
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 7 tgtgtgtgcaggcatctttccagtctacatgtggatccaggagtctgcaggctggttaga 66
|||||| ||||||||||| ||| |||||||||||| | | |||||||||||||||||
Sbjct: 24 tgtgtgagcaggcatcttctcagcctacatgtggattcctaaatctgcaggctggttaga 83
Query: 67 tggttgtca 75
|||||||||
Sbjct: 84 tggttgtca 92
>26535_tgu-mir-456:mirbase
Length = 79
Score = 65.9 bits (33), Expect = 4e-12
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 7 tgtgtgtgcaggcatctttccagtctacatgtggatccaggagtctgcaggctggttaga 66
|||||| ||||||||||| ||| |||||||||||| | | |||||||||||||||||
Sbjct: 4 tgtgtgagcaggcatcttctcagcctacatgtggattcctaaatctgcaggctggttaga 63
Query: 67 tggttgtca 75
|||||||||
Sbjct: 64 tggttgtca 72
