miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00749;mir-208;BX000358.11/72775-72853 7955:Danio rerio
          (zebrafish)
          Length = 79

 Score =  157 bits (79), Expect = 3e-38
 Identities = 79/79 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  tctactgacagagaagctttttgtttgtgttatgtttattttcaaatgtaagacgaacaa 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  tctactgacagagaagctttttgtttgtgttatgtttattttcaaatgtaagacgaacaa 60

                             
Query: 61 aaagtttttctgttagtag 79
          |||||||||||||||||||
Sbjct: 61 aaagtttttctgttagtag 79




>RF00749;mir-208;BAAF04030467.1/12257-12335 8090:Oryzias latipes
          (Japanese medaka)
          Length = 79

 Score = 63.9 bits (32), Expect = 3e-10
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                  
Query: 15 agctttttgtttgtgttatgtttattttcaaatgtaagacgaacaaaaagtttttc 70
          ||||||||||||||||||||||  |  |  ||||||||||||||||||||||||||
Sbjct: 15 agctttttgtttgtgttatgttcctactacaatgtaagacgaacaaaaagtttttc 70