miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>34763_tni-mir-184:mirbase
Length = 73
Score = 129 bits (65), Expect = 3e-31
Identities = 71/73 (97%)
Strand = Plus / Plus
Query: 1 cgctcacatctccttatcacttttccagcccagctataggttttgaatccgttggacgga 60
||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct: 1 cgctcacatctccttatcacttttccagcccagctatagcttctgaatccgttggacgga 60
Query: 61 gaactgataaggg 73
|||||||||||||
Sbjct: 61 gaactgataaggg 73
>34336_dre-mir-184-2:mirbase
Length = 79
Score = 97.6 bits (49), Expect = 1e-21
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 5 cacatctccttatcacttttccagcccagctataggttttgaatccgttggacggagaac 64
|||||||||||||||||||||||||||||||| | | |||||||||||||||||||||
Sbjct: 1 cacatctccttatcacttttccagcccagctaacgatggtgaatccgttggacggagaac 60
Query: 65 tgataaggg 73
|||||||||
Sbjct: 61 tgataaggg 69
>34335_dre-mir-184:mirbase
Length = 87
Score = 81.8 bits (41), Expect = 6e-17
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 9 tctccttatcacttttccagcccagctataggttttgaatccgttggacggagaactgat 68
||||||||||||||||||||||||||||| ||| | || |||||||||||||||||||
Sbjct: 11 tctccttatcacttttccagcccagctatccatttagtattcgttggacggagaactgat 70
Query: 69 aaggg 73
|||||
Sbjct: 71 aaggg 75
>27408_mdo-mir-184:mirbase
Length = 84
Score = 56.0 bits (28), Expect = 3e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 4 tcacatctccttatcacttttccagcccagct 35
||||||| ||||||||||||||||||||||||
Sbjct: 5 tcacatccccttatcacttttccagcccagct 36
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 51 gttggacggagaactgataaggg 73
|||||||||||||||||||||||
Sbjct: 51 gttggacggagaactgataaggg 73
>25809_xtr-mir-184:mirbase
Length = 83
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 11 tccttatcacttttccagcccagct 35
|||||||||||||||||||||||||
Sbjct: 12 tccttatcacttttccagcccagct 36
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 51 gttggacggagaactgataagg 72
||||||||||||||||||||||
Sbjct: 51 gttggacggagaactgataagg 72
>27065_eca-mir-184:mirbase
Length = 70
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 6 acatctccttatcacttttccagcc 30
|||||||||||||||||||||||||
Sbjct: 1 acatctccttatcacttttccagcc 25
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 51 gttggacggagaactgataaggg 73
|||||||||||||||||||||||
Sbjct: 44 gttggacggagaactgataaggg 66
>25979_gga-mir-184:mirbase
Length = 74
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 12 ccttatcacttttccagcccagct 35
||||||||||||||||||||||||
Sbjct: 13 ccttatcacttttccagcccagct 36
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 51 gttggacggagaactgataaggg 73
|||||||||||||||||||||||
Sbjct: 51 gttggacggagaactgataaggg 73
>26487_tgu-mir-184:mirbase
Length = 112
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 12 ccttatcacttttccagcccagct 35
||||||||||||||||||||||||
Sbjct: 41 ccttatcacttttccagcccagct 64
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 51 gttggacggagaactgataaggg 73
|||||||||||||||||||||||
Sbjct: 79 gttggacggagaactgataaggg 101
>27775_mml-mir-184:mirbase
Length = 84
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 12 ccttatcacttttccagcccagct 35
||||||||||||||||||||||||
Sbjct: 13 ccttatcacttttccagcccagct 36
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 51 gttggacggagaactgataaggg 73
|||||||||||||||||||||||
Sbjct: 51 gttggacggagaactgataaggg 73
>28225_mne-mir-184:mirbase
Length = 84
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 12 ccttatcacttttccagcccagct 35
||||||||||||||||||||||||
Sbjct: 13 ccttatcacttttccagcccagct 36
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 51 gttggacggagaactgataaggg 73
|||||||||||||||||||||||
Sbjct: 51 gttggacggagaactgataaggg 73
>28491_hsa-mir-184:mirbase
Length = 84
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 12 ccttatcacttttccagcccagct 35
||||||||||||||||||||||||
Sbjct: 13 ccttatcacttttccagcccagct 36
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 51 gttggacggagaactgataaggg 73
|||||||||||||||||||||||
Sbjct: 51 gttggacggagaactgataaggg 73
>30259_ptr-mir-184:mirbase
Length = 84
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 12 ccttatcacttttccagcccagct 35
||||||||||||||||||||||||
Sbjct: 13 ccttatcacttttccagcccagct 36
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 51 gttggacggagaactgataaggg 73
|||||||||||||||||||||||
Sbjct: 51 gttggacggagaactgataaggg 73
>30873_ppy-mir-184:mirbase
Length = 84
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 12 ccttatcacttttccagcccagct 35
||||||||||||||||||||||||
Sbjct: 13 ccttatcacttttccagcccagct 36
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 51 gttggacggagaactgataaggg 73
|||||||||||||||||||||||
Sbjct: 51 gttggacggagaactgataaggg 73
>31515_oan-mir-184:mirbase
Length = 128
Score = 48.1 bits (24), Expect = 8e-07
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 4 tcacatctccttatcacttttccagcccagct 35
|||| |||| ||||||||||||||||||||||
Sbjct: 31 tcacgtctctttatcacttttccagcccagct 62
>26739_cfa-mir-184:mirbase
Length = 68
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 51 gttggacggagaactgataaggg 73
|||||||||||||||||||||||
Sbjct: 40 gttggacggagaactgataaggg 62
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 12 ccttatcacttttccagcc 30
|||||||||||||||||||
Sbjct: 3 ccttatcacttttccagcc 21
>31900_mmu-mir-184:mirbase
Length = 69
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 51 gttggacggagaactgataaggg 73
|||||||||||||||||||||||
Sbjct: 43 gttggacggagaactgataaggg 65
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 11 tccttatcacttttccagcc 30
||||||||||||||||||||
Sbjct: 5 tccttatcacttttccagcc 24
>32770_rno-mir-184:mirbase
Length = 77
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 51 gttggacggagaactgataaggg 73
|||||||||||||||||||||||
Sbjct: 45 gttggacggagaactgataaggg 67
>33252_bta-mir-184:mirbase
Length = 83
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 4 tcacatctccttatcacttttccagcc 30
||||||| |||||||||||||||||||
Sbjct: 5 tcacatccccttatcacttttccagcc 31
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 51 gttggacggagaactgataaggg 73
|||||||||||||||||||||||
Sbjct: 50 gttggacggagaactgataaggg 72
>34014_ssc-mir-184:mirbase
Length = 83
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 4 tcacatctccttatcacttttccagcc 30
||||||| |||||||||||||||||||
Sbjct: 5 tcacatccccttatcacttttccagcc 31
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 51 gttggacggagaactgataaggg 73
|||||||||||||||||||||||
Sbjct: 50 gttggacggagaactgataaggg 72
>38873_lgi-mir-184:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 53 tggacggagaactgataaggg 73
|||||||||||||||||||||
Sbjct: 61 tggacggagaactgataaggg 81
>38757_cte-mir-184a:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 53 tggacggagaactgataaggg 73
|||||||||||||||||||||
Sbjct: 61 tggacggagaactgataaggg 81
>24688_bfl-mir-184:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 53 tggacggagaactgataaggg 73
|||||||||||||||||||||
Sbjct: 61 tggacggagaactgataaggg 81
>24844_cin-mir-184:mirbase
Length = 102
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 53 tggacggagaactgataaggg 73
|||||||||||||||||||||
Sbjct: 66 tggacggagaactgataaggg 86
>34829_spu-mir-184:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 53 tggacggagaactgataaggg 73
|||||||||||||||||||||
Sbjct: 61 tggacggagaactgataaggg 81
>34885_sko-mir-184:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 53 tggacggagaactgataaggg 73
|||||||||||||||||||||
Sbjct: 61 tggacggagaactgataaggg 81
>34975_isc-mir-184:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 53 tggacggagaactgataaggg 73
|||||||||||||||||||||
Sbjct: 61 tggacggagaactgataaggg 81
>35065_api-mir-184a:mirbase
Length = 65
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 53 tggacggagaactgataaggg 73
|||||||||||||||||||||
Sbjct: 38 tggacggagaactgataaggg 58
>35196_aae-mir-184:mirbase
Length = 88
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 53 tggacggagaactgataaggg 73
|||||||||||||||||||||
Sbjct: 55 tggacggagaactgataaggg 75
>35293_aga-mir-184:mirbase
Length = 82
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 53 tggacggagaactgataaggg 73
|||||||||||||||||||||
Sbjct: 51 tggacggagaactgataaggg 71
>35371_ame-mir-184:mirbase
Length = 92
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 53 tggacggagaactgataaggg 73
|||||||||||||||||||||
Sbjct: 56 tggacggagaactgataaggg 76
>35541_bmo-mir-184:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 53 tggacggagaactgataaggg 73
|||||||||||||||||||||
Sbjct: 52 tggacggagaactgataaggg 72
>36025_cqu-mir-184:mirbase
Length = 85
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 53 tggacggagaactgataaggg 73
|||||||||||||||||||||
Sbjct: 52 tggacggagaactgataaggg 72
>36110_dan-mir-184:mirbase
Length = 88
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 53 tggacggagaactgataaggg 73
|||||||||||||||||||||
Sbjct: 55 tggacggagaactgataaggg 75
>36188_der-mir-184:mirbase
Length = 88
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 53 tggacggagaactgataaggg 73
|||||||||||||||||||||
Sbjct: 55 tggacggagaactgataaggg 75
>36277_dgr-mir-184:mirbase
Length = 88
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 53 tggacggagaactgataaggg 73
|||||||||||||||||||||
Sbjct: 55 tggacggagaactgataaggg 75
>36393_dme-mir-184:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 53 tggacggagaactgataaggg 73
|||||||||||||||||||||
Sbjct: 61 tggacggagaactgataaggg 81
>36394_dme-mir-184:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 53 tggacggagaactgataaggg 73
|||||||||||||||||||||
Sbjct: 61 tggacggagaactgataaggg 81
>36786_dmo-mir-184:mirbase
Length = 98
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 53 tggacggagaactgataaggg 73
|||||||||||||||||||||
Sbjct: 59 tggacggagaactgataaggg 79
>36862_dpe-mir-184:mirbase
Length = 88
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 53 tggacggagaactgataaggg 73
|||||||||||||||||||||
Sbjct: 55 tggacggagaactgataaggg 75
>36937_dps-mir-184:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 53 tggacggagaactgataaggg 73
|||||||||||||||||||||
Sbjct: 61 tggacggagaactgataaggg 81
>37148_dse-mir-184:mirbase
Length = 88
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 53 tggacggagaactgataaggg 73
|||||||||||||||||||||
Sbjct: 55 tggacggagaactgataaggg 75
>37224_dsi-mir-184:mirbase
Length = 88
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 53 tggacggagaactgataaggg 73
|||||||||||||||||||||
Sbjct: 55 tggacggagaactgataaggg 75
>37362_dvi-mir-184:mirbase
Length = 98
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 53 tggacggagaactgataaggg 73
|||||||||||||||||||||
Sbjct: 59 tggacggagaactgataaggg 79
>37441_dwi-mir-184:mirbase
Length = 88
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 53 tggacggagaactgataaggg 73
|||||||||||||||||||||
Sbjct: 55 tggacggagaactgataaggg 75
>37516_dya-mir-184:mirbase
Length = 87
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 53 tggacggagaactgataaggg 73
|||||||||||||||||||||
Sbjct: 54 tggacggagaactgataaggg 74
>37581_ngi-mir-184:mirbase
Length = 89
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 53 tggacggagaactgataaggg 73
|||||||||||||||||||||
Sbjct: 54 tggacggagaactgataaggg 74
>37613_nlo-mir-184:mirbase
Length = 89
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 53 tggacggagaactgataaggg 73
|||||||||||||||||||||
Sbjct: 54 tggacggagaactgataaggg 74
>37653_nvi-mir-184:mirbase
Length = 92
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 53 tggacggagaactgataaggg 73
|||||||||||||||||||||
Sbjct: 56 tggacggagaactgataaggg 76
>37747_tca-mir-184:mirbase
Length = 79
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 53 tggacggagaactgataaggg 73
|||||||||||||||||||||
Sbjct: 49 tggacggagaactgataaggg 69
>37748_tca-mir-184:mirbase
Length = 79
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 53 tggacggagaactgataaggg 73
|||||||||||||||||||||
Sbjct: 49 tggacggagaactgataaggg 69
