miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>34777_tni-mir-202:mirbase
Length = 69
Score = 137 bits (69), Expect = 1e-33
Identities = 69/69 (100%)
Strand = Plus / Plus
Query: 1 tcctttttcctatgcatatacctttttcagatgtaactttaaagaggcatagggcatggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcctttttcctatgcatatacctttttcagatgtaactttaaagaggcatagggcatggg 60
Query: 61 aaaatgggg 69
|||||||||
Sbjct: 61 aaaatgggg 69
>34358_dre-mir-202:mirbase
Length = 76
Score = 89.7 bits (45), Expect = 2e-19
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 1 tcctttttcctatgcatatacctttttcagatgtaactttaaagaggcatagggcatggg 60
||||||||||||||||||||||| ||| | ||| ||||||||||||||||||||||||
Sbjct: 5 tcctttttcctatgcatatacctctttgacatgctgctttaaagaggcatagggcatggg 64
Query: 61 aaaatgggg 69
|||||||||
Sbjct: 65 aaaatgggg 73
>25823_xtr-mir-202-2:mirbase
Length = 87
Score = 69.9 bits (35), Expect = 2e-13
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 1 tcctttttcctatgcatatacctttttcagatgtaactttaaagaggcatagggcatggg 60
||||||||||||||||||||||| ||| | | ||| | ||||| |||||||||||||||
Sbjct: 9 tcctttttcctatgcatatacctctttgaaaaataaatgtaaaggggcatagggcatggg 68
Query: 61 aaaatgg 67
|||||||
Sbjct: 69 aaaatgg 75
>25822_xtr-mir-202-1:mirbase
Length = 87
Score = 61.9 bits (31), Expect = 5e-11
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 1 tcctttttcctatgcatatacctttttcagatgtaactttaaagaggcatagggcatggg 60
||||||||||||||||||||||| ||| | | | | | ||||| |||||||||||||||
Sbjct: 9 tcctttttcctatgcatatacctctttgaaaaatgaatgtaaaggggcatagggcatggg 68
Query: 61 aaaatgg 67
|||||||
Sbjct: 69 aaaatgg 75
>25993_gga-mir-202:mirbase
Length = 89
Score = 58.0 bits (29), Expect = 8e-10
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 1 tcctttttcctatgcatatacctttttcagatgtaactttaaagaggcatagggcatggg 60
||||||||||||||||||||| | ||| ||| | | ||||||||||||| |||||||
Sbjct: 10 tcctttttcctatgcatatacttctttgagagtttgatctaaagaggcatagagcatggg 69
Query: 61 aaaatgggg 69
|||||||||
Sbjct: 70 aaaatgggg 78
>26500_tgu-mir-202-1:mirbase
Length = 70
Score = 54.0 bits (27), Expect = 1e-08
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 3 ctttttcctatgcatatacctttttcagatgtaactttaaagaggcatagggcatgggaa 62
||||||||||||||||||| | ||| ||| | | |||||||| ||||||||||||||
Sbjct: 1 ctttttcctatgcatatacttctttgagaattgcttctaaagaggtatagggcatgggaa 60
Query: 63 aatgggg 69
|||||||
Sbjct: 61 aatgggg 67
>26501_tgu-mir-202-2:mirbase
Length = 70
Score = 54.0 bits (27), Expect = 1e-08
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 3 ctttttcctatgcatatacctttttcagatgtaactttaaagaggcatagggcatgggaa 62
||||||||||||||||||| | ||| ||| | | |||||||| ||||||||||||||
Sbjct: 1 ctttttcctatgcatatacttctttgagaattgcttctaaagaggtatagggcatgggaa 60
Query: 63 aatgggg 69
|||||||
Sbjct: 61 aatgggg 67
>28521_hsa-mir-202:mirbase
Length = 110
Score = 44.1 bits (22), Expect = 1e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 40 taaagaggcatagggcatgggaaaatgggg 69
|||||||| |||||||||||||||| ||||
Sbjct: 61 taaagaggtatagggcatgggaaaacgggg 90
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tcctttttcctatgcatatac 21
|||||||||||||||||||||
Sbjct: 22 tcctttttcctatgcatatac 42
>30280_ptr-mir-202:mirbase
Length = 109
Score = 44.1 bits (22), Expect = 1e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 40 taaagaggcatagggcatgggaaaatgggg 69
|||||||| |||||||||||||||| ||||
Sbjct: 61 taaagaggtatagggcatgggaaaacgggg 90
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tcctttttcctatgcatatac 21
|||||||||||||||||||||
Sbjct: 22 tcctttttcctatgcatatac 42
>33281_bta-mir-202:mirbase
Length = 99
Score = 44.1 bits (22), Expect = 1e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 40 taaagaggcatagggcatgggaaaatgggg 69
|||||||| ||||||||||||||||||||
Sbjct: 52 taaagaggtgtagggcatgggaaaatgggg 81
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tcctttttcctatgcatatac 21
|||||||||||||||||||||
Sbjct: 13 tcctttttcctatgcatatac 33
>26762_cfa-mir-202:mirbase
Length = 71
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tcctttttcctatgcatatac 21
|||||||||||||||||||||
Sbjct: 3 tcctttttcctatgcatatac 23
>31927_mmu-mir-202:mirbase
Length = 72
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tcctttttcctatgcatatac 21
|||||||||||||||||||||
Sbjct: 3 tcctttttcctatgcatatac 23
>31928_mmu-mir-202:mirbase
Length = 72
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tcctttttcctatgcatatac 21
|||||||||||||||||||||
Sbjct: 3 tcctttttcctatgcatatac 23
>32792_rno-mir-202:mirbase
Length = 72
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tcctttttcctatgcatatac 21
|||||||||||||||||||||
Sbjct: 3 tcctttttcctatgcatatac 23
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 40 taaagaggcatagggcatgggaaaatgg 67
|||||||| |||| ||||||||||||||
Sbjct: 42 taaagaggtatagcgcatgggaaaatgg 69
