miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>34783_tni-mir-212:mirbase
Length = 95
Score = 161 bits (81), Expect = 1e-40
Identities = 90/93 (96%)
Strand = Plus / Plus
Query: 1 ggtcagcgcatcaacaccttggctctagactgcttactgctaaaaccgctcataagtaca 60
||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||
Sbjct: 1 ggtcagcgcatcaacaccttggctctagactgcttactgctaacaccgctctgaagtaca 60
Query: 61 gtaacagtctacagtcatggctactgacgcctg 93
|||||||||||||||||||||||||||||||||
Sbjct: 61 gtaacagtctacagtcatggctactgacgcctg 93
>34367_dre-mir-212:mirbase
Length = 94
Score = 97.6 bits (49), Expect = 1e-21
Identities = 81/89 (91%), Gaps = 2/89 (2%)
Strand = Plus / Plus
Query: 2 gtcagcgcatcaacaccttggctctagactgcttactgctaaaaccg-ctcataagtaca 60
||||| ||||||| ||||||||||||||||||||||||||||| | || | |||||||
Sbjct: 1 gtcagtgcatcaataccttggctctagactgcttactgctaaatgtgtctga-aagtaca 59
Query: 61 gtaacagtctacagtcatggctactgacg 89
|||||||||||||||||||||||||||||
Sbjct: 60 gtaacagtctacagtcatggctactgacg 88
>25832_xtr-mir-212:mirbase
Length = 96
Score = 71.9 bits (36), Expect = 8e-14
Identities = 68/76 (89%), Gaps = 2/76 (2%)
Strand = Plus / Plus
Query: 15 caccttggctctagactgcttactgctaaaaccgctc-ataagtacagtaacagtctaca 73
||||||||||||||||||||||||| | |||| | | ||| | ||||||||||||||||
Sbjct: 16 caccttggctctagactgcttactg-tgaaactgtgctataggaacagtaacagtctaca 74
Query: 74 gtcatggctactgacg 89
||||||||||||||||
Sbjct: 75 gtcatggctactgacg 90
>27427_mdo-mir-212:mirbase
Length = 91
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 15 caccttggctctagactgcttactgc 40
||||||||||||||||||||||||||
Sbjct: 15 caccttggctctagactgcttactgc 40
>27808_mml-mir-212:mirbase
Length = 110
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 15 caccttggctctagactgcttactgc 40
||||||||||||||||||||||||||
Sbjct: 30 caccttggctctagactgcttactgc 55
>28530_hsa-mir-212:mirbase
Length = 110
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 15 caccttggctctagactgcttactgc 40
||||||||||||||||||||||||||
Sbjct: 30 caccttggctctagactgcttactgc 55
>31939_mmu-mir-212:mirbase
Length = 91
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 15 caccttggctctagactgcttactgc 40
||||||||||||||||||||||||||
Sbjct: 15 caccttggctctagactgcttactgc 40
>31940_mmu-mir-212:mirbase
Length = 91
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 15 caccttggctctagactgcttactgc 40
||||||||||||||||||||||||||
Sbjct: 15 caccttggctctagactgcttactgc 40
>32803_rno-mir-212:mirbase
Length = 111
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 15 caccttggctctagactgcttactgc 40
||||||||||||||||||||||||||
Sbjct: 31 caccttggctctagactgcttactgc 56
>33289_bta-mir-212:mirbase
Length = 111
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 15 caccttggctctagactgcttactgc 40
||||||||||||||||||||||||||
Sbjct: 31 caccttggctctagactgcttactgc 56
>26772_cfa-mir-212:mirbase
Length = 62
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 16 accttggctctagactgcttactgc 40
|||||||||||||||||||||||||
Sbjct: 1 accttggctctagactgcttactgc 25
>27096_eca-mir-212:mirbase
Length = 60
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 17 ccttggctctagactgcttactgc 40
||||||||||||||||||||||||
Sbjct: 1 ccttggctctagactgcttactgc 24
