miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>34786_tni-mir-216b:mirbase
Length = 77
Score = 137 bits (69), Expect = 1e-33
Identities = 75/77 (97%)
Strand = Plus / Plus
Query: 1 tgactgtttaatctctgcaggcaactgtgatggtgttttatattctcacaatcacctgga 60
||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 1 tgactgtttaatctctgcaggcaactgtgatggtgatttttattctcacaatcacctgga 60
Query: 61 gagattctgcagtttat 77
|||||||||||||||||
Sbjct: 61 gagattctgcagtttat 77
>25334_csa-mir-216b:mirbase
Length = 81
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 9 taatctctgcaggcaactgtgatg 32
||||||||||||||||||||||||
Sbjct: 16 taatctctgcaggcaactgtgatg 39
>34371_dre-mir-216b-1:mirbase
Length = 77
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 9 taatctctgcaggcaactgtgatg 32
||||||||||||||||||||||||
Sbjct: 11 taatctctgcaggcaactgtgatg 34
>34372_dre-mir-216b-2:mirbase
Length = 76
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 9 taatctctgcaggcaactgtgatg 32
||||||||||||||||||||||||
Sbjct: 10 taatctctgcaggcaactgtgatg 33
>25529_pma-mir-216b:mirbase
Length = 89
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 10 aatctctgcaggcaactgtg 29
||||||||||||||||||||
Sbjct: 17 aatctctgcaggcaactgtg 36
>26004_gga-mir-216b:mirbase
Length = 89
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 10 aatctctgcaggcaactgtgatg 32
||||||||||||||| |||||||
Sbjct: 17 aatctctgcaggcaaatgtgatg 39
>26005_gga-mir-216c:mirbase
Length = 86
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 10 aatctctgcaggcaactgtgatg 32
||||||||||||||| |||||||
Sbjct: 71 aatctctgcaggcaaatgtgatg 49
>26512_tgu-mir-216b:mirbase
Length = 71
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 10 aatctctgcaggcaactgtgatg 32
||||||||||||||| |||||||
Sbjct: 12 aatctctgcaggcaagtgtgatg 34
>26776_cfa-mir-216b:mirbase
Length = 62
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 10 aatctctgcaggcaactgtgatg 32
||||||||||||||| |||||||
Sbjct: 2 aatctctgcaggcaaatgtgatg 24
>27100_eca-mir-216b:mirbase
Length = 86
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 10 aatctctgcaggcaactgtgatg 32
||||||||||||||| |||||||
Sbjct: 15 aatctctgcaggcaaatgtgatg 37
>27812_mml-mir-216b:mirbase
Length = 82
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 10 aatctctgcaggcaactgtgatg 32
||||||||||||||| |||||||
Sbjct: 12 aatctctgcaggcaaatgtgatg 34
>28534_hsa-mir-216b:mirbase
Length = 82
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 10 aatctctgcaggcaactgtgatg 32
||||||||||||||| |||||||
Sbjct: 12 aatctctgcaggcaaatgtgatg 34
>30292_ptr-mir-216b:mirbase
Length = 81
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 10 aatctctgcaggcaactgtgatg 32
||||||||||||||| |||||||
Sbjct: 12 aatctctgcaggcaaatgtgatg 34
>30910_ppy-mir-216b:mirbase
Length = 82
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 10 aatctctgcaggcaactgtgatg 32
||||||||||||||| |||||||
Sbjct: 12 aatctctgcaggcaaatgtgatg 34
>31944_mmu-mir-216b:mirbase
Length = 86
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 10 aatctctgcaggcaactgtgatg 32
||||||||||||||| |||||||
Sbjct: 15 aatctctgcaggcaaatgtgatg 37
>32807_rno-mir-216b:mirbase
Length = 102
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 10 aatctctgcaggcaactgtgatg 32
||||||||||||||| |||||||
Sbjct: 21 aatctctgcaggcaaatgtgatg 43
>32808_rno-mir-216b:mirbase
Length = 102
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 10 aatctctgcaggcaactgtgatg 32
||||||||||||||| |||||||
Sbjct: 21 aatctctgcaggcaaatgtgatg 43
>33293_bta-mir-216b:mirbase
Length = 82
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 10 aatctctgcaggcaactgtgatg 32
||||||||||||||| |||||||
Sbjct: 12 aatctctgcaggcaaatgtgatg 34
