miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>26032_gga-mir-455:mirbase
Length = 86
Score = 161 bits (81), Expect = 1e-40
Identities = 81/81 (100%)
Strand = Plus / Plus
Query: 1 ccctggtgtgagggtatgtgcccttggactacatcgtggaagccagcaccatgcagtcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ccctggtgtgagggtatgtgcccttggactacatcgtggaagccagcaccatgcagtcca 61
Query: 61 tgggcatatacacttgcctca 81
|||||||||||||||||||||
Sbjct: 62 tgggcatatacacttgcctca 82
>26033_gga-mir-455:mirbase
Length = 86
Score = 161 bits (81), Expect = 1e-40
Identities = 81/81 (100%)
Strand = Plus / Plus
Query: 1 ccctggtgtgagggtatgtgcccttggactacatcgtggaagccagcaccatgcagtcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ccctggtgtgagggtatgtgcccttggactacatcgtggaagccagcaccatgcagtcca 61
Query: 61 tgggcatatacacttgcctca 81
|||||||||||||||||||||
Sbjct: 62 tgggcatatacacttgcctca 82
>34476_dre-mir-455:mirbase
Length = 96
Score = 161 bits (81), Expect = 1e-40
Identities = 81/81 (100%)
Strand = Plus / Plus
Query: 1 ccctggtgtgagggtatgtgcccttggactacatcgtggaagccagcaccatgcagtcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ccctggtgtgagggtatgtgcccttggactacatcgtggaagccagcaccatgcagtcca 61
Query: 61 tgggcatatacacttgcctca 81
|||||||||||||||||||||
Sbjct: 62 tgggcatatacacttgcctca 82
>25863_xtr-mir-455:mirbase
Length = 87
Score = 153 bits (77), Expect = 2e-38
Identities = 80/81 (98%)
Strand = Plus / Plus
Query: 1 ccctggtgtgagggtatgtgcccttggactacatcgtggaagccagcaccatgcagtcca 60
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ccctggcgtgagggtatgtgcccttggactacatcgtggaagccagcaccatgcagtcca 61
Query: 61 tgggcatatacacttgcctca 81
|||||||||||||||||||||
Sbjct: 62 tgggcatatacacttgcctca 82
>27453_mdo-mir-455:mirbase
Length = 87
Score = 145 bits (73), Expect = 6e-36
Identities = 79/81 (97%)
Strand = Plus / Plus
Query: 1 ccctggtgtgagggtatgtgcccttggactacatcgtggaagccagcaccatgcagtcca 60
|||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 2 ccctggcgtgagggtatgtgcccttggactacatcgtggaagccaacaccatgcagtcca 61
Query: 61 tgggcatatacacttgcctca 81
|||||||||||||||||||||
Sbjct: 62 tgggcatatacacttgcctca 82
>27917_mml-mir-455:mirbase
Length = 96
Score = 145 bits (73), Expect = 6e-36
Identities = 79/81 (97%)
Strand = Plus / Plus
Query: 1 ccctggtgtgagggtatgtgcccttggactacatcgtggaagccagcaccatgcagtcca 60
|||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 2 ccctggcgtgagggtatgtgcctttggactacatcgtggaagccagcaccatgcagtcca 61
Query: 61 tgggcatatacacttgcctca 81
|||||||||||||||||||||
Sbjct: 62 tgggcatatacacttgcctca 82
>27918_mml-mir-455:mirbase
Length = 96
Score = 145 bits (73), Expect = 6e-36
Identities = 79/81 (97%)
Strand = Plus / Plus
Query: 1 ccctggtgtgagggtatgtgcccttggactacatcgtggaagccagcaccatgcagtcca 60
|||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 2 ccctggcgtgagggtatgtgcctttggactacatcgtggaagccagcaccatgcagtcca 61
Query: 61 tgggcatatacacttgcctca 81
|||||||||||||||||||||
Sbjct: 62 tgggcatatacacttgcctca 82
>28665_hsa-mir-455:mirbase
Length = 96
Score = 145 bits (73), Expect = 6e-36
Identities = 79/81 (97%)
Strand = Plus / Plus
Query: 1 ccctggtgtgagggtatgtgcccttggactacatcgtggaagccagcaccatgcagtcca 60
|||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 2 ccctggcgtgagggtatgtgcctttggactacatcgtggaagccagcaccatgcagtcca 61
Query: 61 tgggcatatacacttgcctca 81
|||||||||||||||||||||
Sbjct: 62 tgggcatatacacttgcctca 82
>28666_hsa-mir-455:mirbase
Length = 96
Score = 145 bits (73), Expect = 6e-36
Identities = 79/81 (97%)
Strand = Plus / Plus
Query: 1 ccctggtgtgagggtatgtgcccttggactacatcgtggaagccagcaccatgcagtcca 60
|||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 2 ccctggcgtgagggtatgtgcctttggactacatcgtggaagccagcaccatgcagtcca 61
Query: 61 tgggcatatacacttgcctca 81
|||||||||||||||||||||
Sbjct: 62 tgggcatatacacttgcctca 82
>30386_ptr-mir-455:mirbase
Length = 95
Score = 145 bits (73), Expect = 6e-36
Identities = 79/81 (97%)
Strand = Plus / Plus
Query: 1 ccctggtgtgagggtatgtgcccttggactacatcgtggaagccagcaccatgcagtcca 60
|||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccctggcgtgagggtatgtgcctttggactacatcgtggaagccagcaccatgcagtcca 60
Query: 61 tgggcatatacacttgcctca 81
|||||||||||||||||||||
Sbjct: 61 tgggcatatacacttgcctca 81
>31017_ppy-mir-455:mirbase
Length = 96
Score = 145 bits (73), Expect = 6e-36
Identities = 79/81 (97%)
Strand = Plus / Plus
Query: 1 ccctggtgtgagggtatgtgcccttggactacatcgtggaagccagcaccatgcagtcca 60
|||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 2 ccctggcgtgagggtatgtgcctttggactacatcgtggaagccagcaccatgcagtcca 61
Query: 61 tgggcatatacacttgcctca 81
|||||||||||||||||||||
Sbjct: 62 tgggcatatacacttgcctca 82
>31018_ppy-mir-455:mirbase
Length = 96
Score = 145 bits (73), Expect = 6e-36
Identities = 79/81 (97%)
Strand = Plus / Plus
Query: 1 ccctggtgtgagggtatgtgcccttggactacatcgtggaagccagcaccatgcagtcca 60
|||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 2 ccctggcgtgagggtatgtgcctttggactacatcgtggaagccagcaccatgcagtcca 61
Query: 61 tgggcatatacacttgcctca 81
|||||||||||||||||||||
Sbjct: 62 tgggcatatacacttgcctca 82
>33387_bta-mir-455:mirbase
Length = 89
Score = 145 bits (73), Expect = 6e-36
Identities = 79/81 (97%)
Strand = Plus / Plus
Query: 1 ccctggtgtgagggtatgtgcccttggactacatcgtggaagccagcaccatgcagtcca 60
|||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 2 ccctggcgtgagggtatgtgcctttggactacatcgtggaagccagcaccatgcagtcca 61
Query: 61 tgggcatatacacttgcctca 81
|||||||||||||||||||||
Sbjct: 62 tgggcatatacacttgcctca 82
>34801_tni-mir-455:mirbase
Length = 84
Score = 145 bits (73), Expect = 6e-36
Identities = 79/81 (97%)
Strand = Plus / Plus
Query: 1 ccctggtgtgagggtatgtgcccttggactacatcgtggaagccagcaccatgcagtcca 60
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccctgatgtgagggtatgtgcccttggactacatcgtggaagccagcaccatgcagtcca 60
Query: 61 tgggcatatacacttgcctca 81
||||||||||||||| |||||
Sbjct: 61 tgggcatatacactttcctca 81
>26534_tgu-mir-455:mirbase
Length = 71
Score = 139 bits (70), Expect = 3e-34
Identities = 70/70 (100%)
Strand = Plus / Plus
Query: 12 gggtatgtgcccttggactacatcgtggaagccagcaccatgcagtccatgggcatatac 71
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gggtatgtgcccttggactacatcgtggaagccagcaccatgcagtccatgggcatatac 60
Query: 72 acttgcctca 81
||||||||||
Sbjct: 61 acttgcctca 70
>34103_ssc-mir-455:mirbase
Length = 80
Score = 139 bits (70), Expect = 3e-34
Identities = 73/74 (98%)
Strand = Plus / Plus
Query: 8 gtgagggtatgtgcccttggactacatcgtggaagccagcaccatgcagtccatgggcat 67
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 gtgagggtatgtgcctttggactacatcgtggaagccagcaccatgcagtccatgggcat 64
Query: 68 atacacttgcctca 81
||||||||||||||
Sbjct: 65 atacacttgcctca 78
>34477_dre-mir-455b:mirbase
Length = 105
Score = 121 bits (61), Expect = 8e-29
Identities = 73/77 (94%)
Strand = Plus / Plus
Query: 8 gtgagggtatgtgcccttggactacatcgtggaagccagcaccatgcagtccatgggcat 67
||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 17 gtgagggtatgtgcccttggactacattgtggaggccagcaccatgcagtccatgggcat 76
Query: 68 atacacttgcctcatgg 84
|||||||| | ||||||
Sbjct: 77 atacacttacttcatgg 93
>26853_cfa-mir-455:mirbase
Length = 58
Score = 107 bits (54), Expect = 1e-24
Identities = 57/58 (98%)
Strand = Plus / Plus
Query: 15 tatgtgcccttggactacatcgtggaagccagcaccatgcagtccatgggcatataca 72
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tatgtgcctttggactacatcgtggaagccagcaccatgcagtccatgggcatataca 58
>32088_mmu-mir-455:mirbase
Length = 82
Score = 105 bits (53), Expect = 5e-24
Identities = 75/81 (92%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 1 ccctggtgtgagggtatgtgcccttggactacatcgtggaagccagcaccatgcagtcca 60
|||||||||||| ||||||||| ||||||||||||||| | || ||||||||||||||||
Sbjct: 3 ccctggtgtgagcgtatgtgcctttggactacatcgtgaacgc-agcaccatgcagtcca 61
Query: 61 tgggcatatacacttgcctca 81
||||||||||||||||||||
Sbjct: 62 cgggcatatacacttgcctca 82
>32920_rno-mir-455:mirbase
Length = 78
Score = 105 bits (53), Expect = 5e-24
Identities = 72/77 (93%), Gaps = 1/77 (1%)
Strand = Plus / Plus
Query: 5 ggtgtgagggtatgtgcccttggactacatcgtggaagccagcaccatgcagtccatggg 64
|||||||| ||||||||| ||||||||||||||||| || |||||||||||||||| |||
Sbjct: 1 ggtgtgagcgtatgtgcctttggactacatcgtggacgc-agcaccatgcagtccacggg 59
Query: 65 catatacacttgcctca 81
|||||||||||||||||
Sbjct: 60 catatacacttgcctca 76
