miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00698;mir-489;BAAE01010852.1/933-843 8090:Oryzias latipes
(Japanese medaka)
Length = 91
Score = 147 bits (74), Expect = 3e-35
Identities = 83/86 (96%)
Strand = Plus / Plus
Query: 11 tggtggtggcttggtggtcgtatgcatgacgtcatttacttcgatgattggagtgacatc 70
|||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct: 1 tggtggtggcctggtggtcgtatgtatgacgtcatttacttcgatgcttggagtgacatc 60
Query: 71 atatgtacggctgctaaactgctaca 96
||||||||||||||||||||||||||
Sbjct: 61 atatgtacggctgctaaactgctaca 86
>RF00698;mir-489;AAWZ01021558.1/191255-191164 28377:Anolis
carolinensis (green anole)
Length = 92
Score = 85.7 bits (43), Expect = 1e-16
Identities = 71/78 (91%), Gaps = 3/78 (3%)
Strand = Plus / Plus
Query: 17 tggcttggtggtcgtatgcatgacgtcatttacttcgatgatt--ggagtgacatcatat 74
|||||||||||||||||| |||||||||||||||| | | || |||||||||||||||
Sbjct: 7 tggcttggtggtcgtatgtatgacgtcatttactt-gttcttttaggagtgacatcatat 65
Query: 75 gtacggctgctaaactgc 92
||||||||||||||||||
Sbjct: 66 gtacggctgctaaactgc 83
