miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>34658_ola-mir-430a-2:mirbase
Length = 82
Score = 147 bits (74), Expect = 1e-36
Identities = 80/82 (97%)
Strand = Plus / Plus
Query: 1 ggacataaagatgaccttgacacaggcactgactctttcttctttgtagtaagtgctact 60
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggacatcaagatgaccttgacacaggcactgactctttcttctttgtagtaagtgctact 60
Query: 61 tgttggggtatttttggtgtcc 82
|||||||||| |||||||||||
Sbjct: 61 tgttggggtaattttggtgtcc 82
>34659_ola-mir-430a-3:mirbase
Length = 82
Score = 147 bits (74), Expect = 1e-36
Identities = 80/82 (97%)
Strand = Plus / Plus
Query: 1 ggacataaagatgaccttgacacaggcactgactctttcttctttgtagtaagtgctact 60
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggacatcaagatgaccttgacacaggcactgactctttcttctttgtagtaagtgctact 60
Query: 61 tgttggggtatttttggtgtcc 82
|||||||||| |||||||||||
Sbjct: 61 tgttggggtaattttggtgtcc 82
>34660_ola-mir-430a-4:mirbase
Length = 82
Score = 147 bits (74), Expect = 1e-36
Identities = 80/82 (97%)
Strand = Plus / Plus
Query: 1 ggacataaagatgaccttgacacaggcactgactctttcttctttgtagtaagtgctact 60
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggacatcaagatgaccttgacacaggcactgactctttcttctttgtagtaagtgctact 60
Query: 61 tgttggggtatttttggtgtcc 82
|||||||||| |||||||||||
Sbjct: 61 tgttggggtaattttggtgtcc 82
>34662_ola-mir-430b-2:mirbase
Length = 82
Score = 143 bits (72), Expect = 2e-35
Identities = 78/80 (97%)
Strand = Plus / Plus
Query: 1 ggacataaagatgaccttgacacaggcactgactctttcttctttgtagtaagtgctact 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggacataaagatgaccttgacacaggcactgactctttcttctttgtagtaagtgctaca 60
Query: 61 tgttggggtatttttggtgt 80
|||||||||| |||||||||
Sbjct: 61 tgttggggtaattttggtgt 80
>34661_ola-mir-430b-1:mirbase
Length = 82
Score = 139 bits (70), Expect = 3e-34
Identities = 79/82 (96%)
Strand = Plus / Plus
Query: 1 ggacataaagatgaccttgacacaggcactgactctttcttctttgtagtaagtgctact 60
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1 ggacataaagatgaccttgacacaggcactgactttttcttctttgtagtaagtgctaca 60
Query: 61 tgttggggtatttttggtgtcc 82
|||||||||| |||||||||||
Sbjct: 61 tgttggggtaattttggtgtcc 82
>34664_ola-mir-430c-2:mirbase
Length = 88
Score = 58.0 bits (29), Expect = 1e-09
Identities = 62/73 (84%)
Strand = Plus / Plus
Query: 9 agatgaccttgacacaggcactgactctttcttctttgtagtaagtgctacttgttgggg 68
|||||||||| ||| ||||||||||| ||||||| |||||||||||| ||||||||
Sbjct: 12 agatgaccttaacataggcactgacttgaatttctttgcagtaagtgctacatgttgggg 71
Query: 69 tatttttggtgtc 81
|| | ||||||||
Sbjct: 72 tagtcttggtgtc 84
>34667_ola-mir-430c-5:mirbase
Length = 88
Score = 58.0 bits (29), Expect = 1e-09
Identities = 62/73 (84%)
Strand = Plus / Plus
Query: 9 agatgaccttgacacaggcactgactctttcttctttgtagtaagtgctacttgttgggg 68
|||||||||| ||| ||||||||||| ||||||| |||||||||||| ||||||||
Sbjct: 12 agatgaccttaacataggcactgacttgaatttctttgcagtaagtgctacatgttgggg 71
Query: 69 tatttttggtgtc 81
|| | ||||||||
Sbjct: 72 tagtcttggtgtc 84
>34665_ola-mir-430c-3:mirbase
Length = 89
Score = 52.0 bits (26), Expect = 6e-08
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 9 agatgaccttgacacaggcactgactctttcttctttgtagtaagtgctacttgttgggg 68
|||||||||| ||| ||||||||||| ||||||| |||||||||||| ||||||||
Sbjct: 12 agatgaccttaacataggcactgacttgaatttctttgcagtaagtgctacatgttgggg 71
Query: 69 ta 70
||
Sbjct: 72 ta 73
>34669_ola-mir-430c-7:mirbase
Length = 84
Score = 52.0 bits (26), Expect = 6e-08
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 40 ttctttgtagtaagtgctacttgttggggtatttttggtgtc 81
||||||| |||||||||||| |||||||||| | ||||||||
Sbjct: 37 ttctttgcagtaagtgctacatgttggggtagtcttggtgtc 78
>34663_ola-mir-430c-1:mirbase
Length = 86
Score = 50.1 bits (25), Expect = 2e-07
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 41 tctttgtagtaagtgctacttgttggggtatttttggtgtc 81
|||||| |||||||||||| |||||||||| | ||||||||
Sbjct: 42 tctttgcagtaagtgctacatgttggggtagtcttggtgtc 82
>34666_ola-mir-430c-4:mirbase
Length = 97
Score = 50.1 bits (25), Expect = 2e-07
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 41 tctttgtagtaagtgctacttgttggggtatttttggtgtc 81
|||||| |||||||||||| |||||||||| | ||||||||
Sbjct: 51 tctttgcagtaagtgctacatgttggggtagtcttggtgtc 91
>34668_ola-mir-430c-6:mirbase
Length = 95
Score = 46.1 bits (23), Expect = 4e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 40 ttctttgtagtaagtgctacttgttggggta 70
||||||| |||||||||||| ||||||||||
Sbjct: 48 ttctttgcagtaagtgctacatgttggggta 78
>34411_dre-mir-430a-18:mirbase
Length = 94
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 49 gtaagtgctacttgttggggtattttt 75
|||||||||| ||||||||||| ||||
Sbjct: 56 gtaagtgctatttgttggggtagtttt 82
>34412_dre-mir-430a-19:mirbase
Length = 94
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 49 gtaagtgctacttgttggggtattttt 75
|||||||||| ||||||||||| ||||
Sbjct: 56 gtaagtgctatttgttggggtagtttt 82
