miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>34662_ola-mir-430b-2:mirbase
Length = 82
Score = 151 bits (76), Expect = 9e-38
Identities = 79/80 (98%)
Strand = Plus / Plus
Query: 1 ggacataaagatgaccttgacacaggcactgactttttcttctttgtagtaagtgctaca 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1 ggacataaagatgaccttgacacaggcactgactctttcttctttgtagtaagtgctaca 60
Query: 61 tgttggggtaattttggtgt 80
||||||||||||||||||||
Sbjct: 61 tgttggggtaattttggtgt 80
>34657_ola-mir-430a-1:mirbase
Length = 82
Score = 139 bits (70), Expect = 3e-34
Identities = 79/82 (96%)
Strand = Plus / Plus
Query: 1 ggacataaagatgaccttgacacaggcactgactttttcttctttgtagtaagtgctaca 60
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1 ggacataaagatgaccttgacacaggcactgactctttcttctttgtagtaagtgctact 60
Query: 61 tgttggggtaattttggtgtcc 82
|||||||||| |||||||||||
Sbjct: 61 tgttggggtatttttggtgtcc 82
>34658_ola-mir-430a-2:mirbase
Length = 82
Score = 139 bits (70), Expect = 3e-34
Identities = 79/82 (96%)
Strand = Plus / Plus
Query: 1 ggacataaagatgaccttgacacaggcactgactttttcttctttgtagtaagtgctaca 60
|||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1 ggacatcaagatgaccttgacacaggcactgactctttcttctttgtagtaagtgctact 60
Query: 61 tgttggggtaattttggtgtcc 82
||||||||||||||||||||||
Sbjct: 61 tgttggggtaattttggtgtcc 82
>34659_ola-mir-430a-3:mirbase
Length = 82
Score = 139 bits (70), Expect = 3e-34
Identities = 79/82 (96%)
Strand = Plus / Plus
Query: 1 ggacataaagatgaccttgacacaggcactgactttttcttctttgtagtaagtgctaca 60
|||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1 ggacatcaagatgaccttgacacaggcactgactctttcttctttgtagtaagtgctact 60
Query: 61 tgttggggtaattttggtgtcc 82
||||||||||||||||||||||
Sbjct: 61 tgttggggtaattttggtgtcc 82
>34660_ola-mir-430a-4:mirbase
Length = 82
Score = 139 bits (70), Expect = 3e-34
Identities = 79/82 (96%)
Strand = Plus / Plus
Query: 1 ggacataaagatgaccttgacacaggcactgactttttcttctttgtagtaagtgctaca 60
|||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1 ggacatcaagatgaccttgacacaggcactgactctttcttctttgtagtaagtgctact 60
Query: 61 tgttggggtaattttggtgtcc 82
||||||||||||||||||||||
Sbjct: 61 tgttggggtaattttggtgtcc 82
>34664_ola-mir-430c-2:mirbase
Length = 88
Score = 73.8 bits (37), Expect = 2e-14
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 9 agatgaccttgacacaggcactgactttttcttctttgtagtaagtgctacatgttgggg 68
|||||||||| ||| |||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 12 agatgaccttaacataggcactgacttgaatttctttgcagtaagtgctacatgttgggg 71
Query: 69 taattttggtgtc 81
|| | ||||||||
Sbjct: 72 tagtcttggtgtc 84
>34667_ola-mir-430c-5:mirbase
Length = 88
Score = 73.8 bits (37), Expect = 2e-14
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 9 agatgaccttgacacaggcactgactttttcttctttgtagtaagtgctacatgttgggg 68
|||||||||| ||| |||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 12 agatgaccttaacataggcactgacttgaatttctttgcagtaagtgctacatgttgggg 71
Query: 69 taattttggtgtc 81
|| | ||||||||
Sbjct: 72 tagtcttggtgtc 84
>34665_ola-mir-430c-3:mirbase
Length = 89
Score = 67.9 bits (34), Expect = 1e-12
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 9 agatgaccttgacacaggcactgactttttcttctttgtagtaagtgctacatgttgggg 68
|||||||||| ||| |||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 12 agatgaccttaacataggcactgacttgaatttctttgcagtaagtgctacatgttgggg 71
Query: 69 ta 70
||
Sbjct: 72 ta 73
>34663_ola-mir-430c-1:mirbase
Length = 86
Score = 65.9 bits (33), Expect = 4e-12
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 9 agatgaccttgacacaggcactgactttttcttctttgtagtaagtgctacatgttgggg 68
|||||||||| ||| |||||||||||| |||||| |||||||||||||||||||||
Sbjct: 10 agatgaccttaacataggcactgacttgaatatctttgcagtaagtgctacatgttgggg 69
Query: 69 taattttggtgtc 81
|| | ||||||||
Sbjct: 70 tagtcttggtgtc 82
>34669_ola-mir-430c-7:mirbase
Length = 84
Score = 60.0 bits (30), Expect = 3e-10
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 40 ttctttgtagtaagtgctacatgttggggtaattttggtgtc 81
||||||| ||||||||||||||||||||||| | ||||||||
Sbjct: 37 ttctttgcagtaagtgctacatgttggggtagtcttggtgtc 78
>34666_ola-mir-430c-4:mirbase
Length = 97
Score = 58.0 bits (29), Expect = 1e-09
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 41 tctttgtagtaagtgctacatgttggggtaattttggtgtc 81
|||||| ||||||||||||||||||||||| | ||||||||
Sbjct: 51 tctttgcagtaagtgctacatgttggggtagtcttggtgtc 91
>34668_ola-mir-430c-6:mirbase
Length = 95
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 40 ttctttgtagtaagtgctacatgttggggta 70
||||||| |||||||||||||||||||||||
Sbjct: 48 ttctttgcagtaagtgctacatgttggggta 78
