miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>34664_ola-mir-430c-2:mirbase
Length = 88
Score = 159 bits (80), Expect = 4e-40
Identities = 83/84 (98%)
Strand = Plus / Plus
Query: 3 gacattcagatgaccttaacataggcactgacttgaatatctttgcagtaagtgctacat 62
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 5 gacattcagatgaccttaacataggcactgacttgaatttctttgcagtaagtgctacat 64
Query: 63 gttggggtagtcttggtgtctagc 86
||||||||||||||||||||||||
Sbjct: 65 gttggggtagtcttggtgtctagc 88
>34667_ola-mir-430c-5:mirbase
Length = 88
Score = 157 bits (79), Expect = 2e-39
Identities = 82/83 (98%)
Strand = Plus / Plus
Query: 3 gacattcagatgaccttaacataggcactgacttgaatatctttgcagtaagtgctacat 62
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 5 gacattcagatgaccttaacataggcactgacttgaatttctttgcagtaagtgctacat 64
Query: 63 gttggggtagtcttggtgtctag 85
|||||||||||||||||||||||
Sbjct: 65 gttggggtagtcttggtgtctag 87
>34665_ola-mir-430c-3:mirbase
Length = 89
Score = 149 bits (75), Expect = 4e-37
Identities = 81/83 (97%)
Strand = Plus / Plus
Query: 1 cagacattcagatgaccttaacataggcactgacttgaatatctttgcagtaagtgctac 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 3 cagacattcagatgaccttaacataggcactgacttgaatttctttgcagtaagtgctac 62
Query: 61 atgttggggtagtcttggtgtct 83
|||||||||||||||| ||||||
Sbjct: 63 atgttggggtagtctttgtgtct 85
>34669_ola-mir-430c-7:mirbase
Length = 84
Score = 97.6 bits (49), Expect = 1e-21
Identities = 52/53 (98%)
Strand = Plus / Plus
Query: 34 cttgaatatctttgcagtaagtgctacatgttggggtagtcttggtgtctagc 86
||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30 cttgaatttctttgcagtaagtgctacatgttggggtagtcttggtgtctagc 82
>34666_ola-mir-430c-4:mirbase
Length = 97
Score = 89.7 bits (45), Expect = 3e-19
Identities = 45/45 (100%)
Strand = Plus / Plus
Query: 42 tctttgcagtaagtgctacatgttggggtagtcttggtgtctagc 86
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51 tctttgcagtaagtgctacatgttggggtagtcttggtgtctagc 95
>34668_ola-mir-430c-6:mirbase
Length = 95
Score = 81.8 bits (41), Expect = 7e-17
Identities = 44/45 (97%)
Strand = Plus / Plus
Query: 42 tctttgcagtaagtgctacatgttggggtagtcttggtgtctagc 86
|||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 49 tctttgcagtaagtgctacatgttggggtagtctgggtgtctagc 93
>34661_ola-mir-430b-1:mirbase
Length = 82
Score = 65.9 bits (33), Expect = 4e-12
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 10 agatgaccttaacataggcactgacttgaatatctttgcagtaagtgctacatgttgggg 69
|||||||||| ||| |||||||||||| |||||| |||||||||||||||||||||
Sbjct: 9 agatgaccttgacacaggcactgactttttcttctttgtagtaagtgctacatgttgggg 68
Query: 70 tagtcttggtgtc 82
|| | ||||||||
Sbjct: 69 taattttggtgtc 81
>34662_ola-mir-430b-2:mirbase
Length = 82
Score = 56.0 bits (28), Expect = 4e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 42 tctttgcagtaagtgctacatgttggggtagtcttggtgt 81
|||||| ||||||||||||||||||||||| | |||||||
Sbjct: 41 tctttgtagtaagtgctacatgttggggtaattttggtgt 80
>34657_ola-mir-430a-1:mirbase
Length = 82
Score = 50.1 bits (25), Expect = 3e-07
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 42 tctttgcagtaagtgctacatgttggggtagtcttggtgtc 82
|||||| |||||||||||| |||||||||| | ||||||||
Sbjct: 41 tctttgtagtaagtgctacttgttggggtatttttggtgtc 81
>34658_ola-mir-430a-2:mirbase
Length = 82
Score = 50.1 bits (25), Expect = 3e-07
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 42 tctttgcagtaagtgctacatgttggggtagtcttggtgtc 82
|||||| |||||||||||| |||||||||| | ||||||||
Sbjct: 41 tctttgtagtaagtgctacttgttggggtaattttggtgtc 81
>34659_ola-mir-430a-3:mirbase
Length = 82
Score = 50.1 bits (25), Expect = 3e-07
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 42 tctttgcagtaagtgctacatgttggggtagtcttggtgtc 82
|||||| |||||||||||| |||||||||| | ||||||||
Sbjct: 41 tctttgtagtaagtgctacttgttggggtaattttggtgtc 81
>34660_ola-mir-430a-4:mirbase
Length = 82
Score = 50.1 bits (25), Expect = 3e-07
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 42 tctttgcagtaagtgctacatgttggggtagtcttggtgtc 82
|||||| |||||||||||| |||||||||| | ||||||||
Sbjct: 41 tctttgtagtaagtgctacttgttggggtaattttggtgtc 81
