miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>34664_ola-mir-430c-2:mirbase
Length = 88
Score = 153 bits (77), Expect = 2e-38
Identities = 80/81 (98%)
Strand = Plus / Plus
Query: 5 gacattcagatgaccttaacataggcactgacttgaatttctttgcagtaagtgctacat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 gacattcagatgaccttaacataggcactgacttgaatttctttgcagtaagtgctacat 64
Query: 65 gttggggtagtctttgtgtct 85
|||||||||||||| ||||||
Sbjct: 65 gttggggtagtcttggtgtct 85
>34667_ola-mir-430c-5:mirbase
Length = 88
Score = 153 bits (77), Expect = 2e-38
Identities = 80/81 (98%)
Strand = Plus / Plus
Query: 5 gacattcagatgaccttaacataggcactgacttgaatttctttgcagtaagtgctacat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 gacattcagatgaccttaacataggcactgacttgaatttctttgcagtaagtgctacat 64
Query: 65 gttggggtagtctttgtgtct 85
|||||||||||||| ||||||
Sbjct: 65 gttggggtagtcttggtgtct 85
>34663_ola-mir-430c-1:mirbase
Length = 86
Score = 149 bits (75), Expect = 4e-37
Identities = 81/83 (97%)
Strand = Plus / Plus
Query: 3 cagacattcagatgaccttaacataggcactgacttgaatttctttgcagtaagtgctac 62
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1 cagacattcagatgaccttaacataggcactgacttgaatatctttgcagtaagtgctac 60
Query: 63 atgttggggtagtctttgtgtct 85
|||||||||||||||| ||||||
Sbjct: 61 atgttggggtagtcttggtgtct 83
>34669_ola-mir-430c-7:mirbase
Length = 84
Score = 91.7 bits (46), Expect = 8e-20
Identities = 49/50 (98%)
Strand = Plus / Plus
Query: 36 cttgaatttctttgcagtaagtgctacatgttggggtagtctttgtgtct 85
||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 30 cttgaatttctttgcagtaagtgctacatgttggggtagtcttggtgtct 79
>34666_ola-mir-430c-4:mirbase
Length = 97
Score = 75.8 bits (38), Expect = 5e-15
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 44 tctttgcagtaagtgctacatgttggggtagtctttgtgtct 85
||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 51 tctttgcagtaagtgctacatgttggggtagtcttggtgtct 92
>34668_ola-mir-430c-6:mirbase
Length = 95
Score = 75.8 bits (38), Expect = 5e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 40 aatttctttgcagtaagtgctacatgttggggtagtct 77
||||||||||||||||||||||||||||||||||||||
Sbjct: 45 aatttctttgcagtaagtgctacatgttggggtagtct 82
>34661_ola-mir-430b-1:mirbase
Length = 82
Score = 67.9 bits (34), Expect = 1e-12
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 12 agatgaccttaacataggcactgacttgaatttctttgcagtaagtgctacatgttgggg 71
|||||||||| ||| |||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 9 agatgaccttgacacaggcactgactttttcttctttgtagtaagtgctacatgttgggg 68
Query: 72 ta 73
||
Sbjct: 69 ta 70
>34662_ola-mir-430b-2:mirbase
Length = 82
Score = 60.0 bits (30), Expect = 3e-10
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 12 agatgaccttaacataggcactgacttgaatttctttgcagtaagtgctacatgttgggg 71
|||||||||| ||| ||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 9 agatgaccttgacacaggcactgactctttcttctttgtagtaagtgctacatgttgggg 68
Query: 72 ta 73
||
Sbjct: 69 ta 70
>34657_ola-mir-430a-1:mirbase
Length = 82
Score = 52.0 bits (26), Expect = 7e-08
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 12 agatgaccttaacataggcactgacttgaatttctttgcagtaagtgctacatgttgggg 71
|||||||||| ||| ||||||||||| ||||||| |||||||||||| ||||||||
Sbjct: 9 agatgaccttgacacaggcactgactctttcttctttgtagtaagtgctacttgttgggg 68
Query: 72 ta 73
||
Sbjct: 69 ta 70
>34658_ola-mir-430a-2:mirbase
Length = 82
Score = 52.0 bits (26), Expect = 7e-08
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 12 agatgaccttaacataggcactgacttgaatttctttgcagtaagtgctacatgttgggg 71
|||||||||| ||| ||||||||||| ||||||| |||||||||||| ||||||||
Sbjct: 9 agatgaccttgacacaggcactgactctttcttctttgtagtaagtgctacttgttgggg 68
Query: 72 ta 73
||
Sbjct: 69 ta 70
>34659_ola-mir-430a-3:mirbase
Length = 82
Score = 52.0 bits (26), Expect = 7e-08
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 12 agatgaccttaacataggcactgacttgaatttctttgcagtaagtgctacatgttgggg 71
|||||||||| ||| ||||||||||| ||||||| |||||||||||| ||||||||
Sbjct: 9 agatgaccttgacacaggcactgactctttcttctttgtagtaagtgctacttgttgggg 68
Query: 72 ta 73
||
Sbjct: 69 ta 70
>34660_ola-mir-430a-4:mirbase
Length = 82
Score = 52.0 bits (26), Expect = 7e-08
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 12 agatgaccttaacataggcactgacttgaatttctttgcagtaagtgctacatgttgggg 71
|||||||||| ||| ||||||||||| ||||||| |||||||||||| ||||||||
Sbjct: 9 agatgaccttgacacaggcactgactctttcttctttgtagtaagtgctacttgttgggg 68
Query: 72 ta 73
||
Sbjct: 69 ta 70
