miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01413;miR-430;BAAE01312757.1/678-765 8090:Oryzias latipes
(Japanese medaka)
Length = 88
Score = 67.9 bits (34), Expect = 2e-11
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 53 tttgcagtaagtgctacatgttggggtagtcttggtgt 90
|||||| |||||||||||||||||||||||||||||||
Sbjct: 51 tttgcaataagtgctacatgttggggtagtcttggtgt 88
>RF01413;miR-430;BAAE01232573.1/815-728 8090:Oryzias latipes
(Japanese medaka)
Length = 88
Score = 50.1 bits (25), Expect = 5e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 58 agtaagtgctacatgttggggtagtcttggtgt 90
||||||||||||||||||||||| | |||||||
Sbjct: 56 agtaagtgctacatgttggggtaattttggtgt 88
>RF01413;miR-430;ACDA01001276.1/512-421 321403:Nothobranchius
kuhntae (Beira killifish)
Length = 92
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 57 cagtaagtgctacatgttgggg 78
||||||||||||||||||||||
Sbjct: 58 cagtaagtgctacatgttgggg 79
