miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>34533_fru-let-7i:mirbase
Length = 84
Score = 167 bits (84), Expect = 2e-42
Identities = 84/84 (100%)
Strand = Plus / Plus
Query: 1 ctggctgaggtagtagtttgtgctgttggttgggttgtgacactgcccgctatggagatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctggctgaggtagtagtttgtgctgttggttgggttgtgacactgcccgctatggagatg 60
Query: 61 actgcgcaagctactgccttgcta 84
||||||||||||||||||||||||
Sbjct: 61 actgcgcaagctactgccttgcta 84
>25683_xtr-let-7i:mirbase
Length = 85
Score = 143 bits (72), Expect = 2e-35
Identities = 81/84 (96%)
Strand = Plus / Plus
Query: 1 ctggctgaggtagtagtttgtgctgttggttgggttgtgacactgcccgctatggagatg 60
|||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct: 1 ctggctgaggtagtagtttgtgctgttggtcgggttgtgacactgcccgctgtggagata 60
Query: 61 actgcgcaagctactgccttgcta 84
||||||||||||||||||||||||
Sbjct: 61 actgcgcaagctactgccttgcta 84
>25876_gga-let-7i:mirbase
Length = 84
Score = 135 bits (68), Expect = 5e-33
Identities = 80/84 (95%)
Strand = Plus / Plus
Query: 1 ctggctgaggtagtagtttgtgctgttggttgggttgtgacactgcccgctatggagatg 60
|||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||
Sbjct: 1 ctggctgaggtagtagtttgtgctgttggtcgggttgtgacattgcccgctgtggagata 60
Query: 61 actgcgcaagctactgccttgcta 84
||||||||||||||||||||||||
Sbjct: 61 actgcgcaagctactgccttgcta 84
>26387_tgu-let-7i:mirbase
Length = 92
Score = 135 bits (68), Expect = 5e-33
Identities = 80/84 (95%)
Strand = Plus / Plus
Query: 1 ctggctgaggtagtagtttgtgctgttggttgggttgtgacactgcccgctatggagatg 60
|||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||
Sbjct: 6 ctggctgaggtagtagtttgtgctgttggtcgggttgtgacattgcccgctgtggagata 65
Query: 61 actgcgcaagctactgccttgcta 84
||||||||||||||||||||||||
Sbjct: 66 actgcgcaagctactgccttgcta 89
>27326_mdo-let-7i:mirbase
Length = 84
Score = 135 bits (68), Expect = 5e-33
Identities = 80/84 (95%)
Strand = Plus / Plus
Query: 1 ctggctgaggtagtagtttgtgctgttggttgggttgtgacactgcccgctatggagatg 60
|||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||
Sbjct: 1 ctggctgaggtagtagtttgtgctgttggtcgggttgtgacattgcccgctgtggagata 60
Query: 61 actgcgcaagctactgccttgcta 84
||||||||||||||||||||||||
Sbjct: 61 actgcgcaagctactgccttgcta 84
>27639_mml-let-7i:mirbase
Length = 85
Score = 135 bits (68), Expect = 5e-33
Identities = 80/84 (95%)
Strand = Plus / Plus
Query: 1 ctggctgaggtagtagtttgtgctgttggttgggttgtgacactgcccgctatggagatg 60
|||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||
Sbjct: 1 ctggctgaggtagtagtttgtgctgttggtcgggttgtgacattgcccgctgtggagata 60
Query: 61 actgcgcaagctactgccttgcta 84
||||||||||||||||||||||||
Sbjct: 61 actgcgcaagctactgccttgcta 84
>28349_hsa-let-7i:mirbase
Length = 84
Score = 135 bits (68), Expect = 5e-33
Identities = 80/84 (95%)
Strand = Plus / Plus
Query: 1 ctggctgaggtagtagtttgtgctgttggttgggttgtgacactgcccgctatggagatg 60
|||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||
Sbjct: 1 ctggctgaggtagtagtttgtgctgttggtcgggttgtgacattgcccgctgtggagata 60
Query: 61 actgcgcaagctactgccttgcta 84
||||||||||||||||||||||||
Sbjct: 61 actgcgcaagctactgccttgcta 84
>30741_ppy-let-7i:mirbase
Length = 84
Score = 135 bits (68), Expect = 5e-33
Identities = 80/84 (95%)
Strand = Plus / Plus
Query: 1 ctggctgaggtagtagtttgtgctgttggttgggttgtgacactgcccgctatggagatg 60
|||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||
Sbjct: 1 ctggctgaggtagtagtttgtgctgttggtcgggttgtgacattgcccgctgtggagata 60
Query: 61 actgcgcaagctactgccttgcta 84
||||||||||||||||||||||||
Sbjct: 61 actgcgcaagctactgccttgcta 84
>31762_mmu-let-7i:mirbase
Length = 85
Score = 135 bits (68), Expect = 5e-33
Identities = 80/84 (95%)
Strand = Plus / Plus
Query: 1 ctggctgaggtagtagtttgtgctgttggttgggttgtgacactgcccgctatggagatg 60
|||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||
Sbjct: 1 ctggctgaggtagtagtttgtgctgttggtcgggttgtgacattgcccgctgtggagata 60
Query: 61 actgcgcaagctactgccttgcta 84
||||||||||||||||||||||||
Sbjct: 61 actgcgcaagctactgccttgcta 84
>32647_rno-let-7i:mirbase
Length = 85
Score = 135 bits (68), Expect = 5e-33
Identities = 80/84 (95%)
Strand = Plus / Plus
Query: 1 ctggctgaggtagtagtttgtgctgttggttgggttgtgacactgcccgctatggagatg 60
|||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||
Sbjct: 1 ctggctgaggtagtagtttgtgctgttggtcgggttgtgacattgcccgctgtggagata 60
Query: 61 actgcgcaagctactgccttgcta 84
||||||||||||||||||||||||
Sbjct: 61 actgcgcaagctactgccttgcta 84
>33118_bta-let-7i:mirbase
Length = 84
Score = 135 bits (68), Expect = 5e-33
Identities = 80/84 (95%)
Strand = Plus / Plus
Query: 1 ctggctgaggtagtagtttgtgctgttggttgggttgtgacactgcccgctatggagatg 60
|||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||
Sbjct: 1 ctggctgaggtagtagtttgtgctgttggtcgggttgtgacattgcccgctgtggagata 60
Query: 61 actgcgcaagctactgccttgcta 84
||||||||||||||||||||||||
Sbjct: 61 actgcgcaagctactgccttgcta 84
>33904_ssc-let-7i:mirbase
Length = 85
Score = 135 bits (68), Expect = 5e-33
Identities = 80/84 (95%)
Strand = Plus / Plus
Query: 1 ctggctgaggtagtagtttgtgctgttggttgggttgtgacactgcccgctatggagatg 60
|||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||
Sbjct: 1 ctggctgaggtagtagtttgtgctgttggtcgggttgtgacattgcccgctgtggagata 60
Query: 61 actgcgcaagctactgccttgcta 84
||||||||||||||||||||||||
Sbjct: 61 actgcgcaagctactgccttgcta 84
>30136_ptr-let-7i:mirbase
Length = 83
Score = 133 bits (67), Expect = 2e-32
Identities = 79/83 (95%)
Strand = Plus / Plus
Query: 1 ctggctgaggtagtagtttgtgctgttggttgggttgtgacactgcccgctatggagatg 60
|||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||
Sbjct: 1 ctggctgaggtagtagtttgtgctgttggtcgggttgtgacattgcccgctgtggagata 60
Query: 61 actgcgcaagctactgccttgct 83
|||||||||||||||||||||||
Sbjct: 61 actgcgcaagctactgccttgct 83
>34182_dre-let-7i:mirbase
Length = 95
Score = 131 bits (66), Expect = 9e-32
Identities = 78/82 (95%)
Strand = Plus / Plus
Query: 1 ctggctgaggtagtagtttgtgctgttggttgggttgtgacactgcccgctatggagatg 60
|||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||
Sbjct: 6 ctggctgaggtagtagtttgtgctgttggttgggatgtgacattgcccgttatggagatg 65
Query: 61 actgcgcaagctactgccttgc 82
||||||||||||||| ||||||
Sbjct: 66 actgcgcaagctactcccttgc 87
>25677_xtr-let-7b:mirbase
Length = 82
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 ctggctgaggtagtagtttgtg 22
||||||||||||||||||||||
Sbjct: 1 ctggctgaggtagtagtttgtg 22
>25875_gga-let-7g:mirbase
Length = 83
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 3 ggctgaggtagtagtttgt 21
|||||||||||||||||||
Sbjct: 2 ggctgaggtagtagtttgt 20
>26385_tgu-let-7g-1:mirbase
Length = 92
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 3 ggctgaggtagtagtttgt 21
|||||||||||||||||||
Sbjct: 8 ggctgaggtagtagtttgt 26
>26386_tgu-let-7g-2:mirbase
Length = 92
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 3 ggctgaggtagtagtttgt 21
|||||||||||||||||||
Sbjct: 8 ggctgaggtagtagtttgt 26
>26935_eca-let-7g:mirbase
Length = 88
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 3 ggctgaggtagtagtttgt 21
|||||||||||||||||||
Sbjct: 4 ggctgaggtagtagtttgt 22
>27325_mdo-let-7g:mirbase
Length = 83
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 3 ggctgaggtagtagtttgt 21
|||||||||||||||||||
Sbjct: 2 ggctgaggtagtagtttgt 20
>27638_mml-let-7g:mirbase
Length = 84
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 3 ggctgaggtagtagtttgt 21
|||||||||||||||||||
Sbjct: 2 ggctgaggtagtagtttgt 20
>28348_hsa-let-7g:mirbase
Length = 84
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 3 ggctgaggtagtagtttgt 21
|||||||||||||||||||
Sbjct: 2 ggctgaggtagtagtttgt 20
>30135_ptr-let-7g:mirbase
Length = 83
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 3 ggctgaggtagtagtttgt 21
|||||||||||||||||||
Sbjct: 2 ggctgaggtagtagtttgt 20
>30740_ppy-let-7g:mirbase
Length = 84
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 3 ggctgaggtagtagtttgt 21
|||||||||||||||||||
Sbjct: 2 ggctgaggtagtagtttgt 20
>31415_oan-let-7g:mirbase
Length = 91
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 3 ggctgaggtagtagtttgt 21
|||||||||||||||||||
Sbjct: 5 ggctgaggtagtagtttgt 23
>31761_mmu-let-7g:mirbase
Length = 88
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 3 ggctgaggtagtagtttgt 21
|||||||||||||||||||
Sbjct: 4 ggctgaggtagtagtttgt 22
>33117_bta-let-7g:mirbase
Length = 83
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 3 ggctgaggtagtagtttgt 21
|||||||||||||||||||
Sbjct: 2 ggctgaggtagtagtttgt 20
>33903_ssc-let-7g:mirbase
Length = 80
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 3 ggctgaggtagtagtttgt 21
|||||||||||||||||||
Sbjct: 1 ggctgaggtagtagtttgt 19
