miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00455;mir-15;CAAE01014537.1/473298-473386 99883:Tetraodon
nigroviridis
Length = 89
Score = 176 bits (89), Expect = 3e-44
Identities = 89/89 (100%)
Strand = Plus / Plus
Query: 2 cccttagactgctttagcagcgcatcatggtttgtaatgatgtggaaaaaaggtgcaaac 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cccttagactgctttagcagcgcatcatggtttgtaatgatgtggaaaaaaggtgcaaac 60
Query: 62 cataatttgctgctttagaattttaagga 90
|||||||||||||||||||||||||||||
Sbjct: 61 cataatttgctgctttagaattttaagga 89
>RF00455;mir-15;AANH01002998.1/16865-16950 69293:Gasterosteus
aculeatus (three-spined stickleback)
Length = 86
Score = 101 bits (51), Expect = 1e-21
Identities = 80/89 (89%), Gaps = 3/89 (3%)
Strand = Plus / Plus
Query: 2 cccttagactgctttagcagcgcatcatggtttgtaatgatgtggaaaaaaggtgcaaac 61
||||||||||||| |||||||||||||||||||| || ||||||||| ||||| |||
Sbjct: 1 cccttagactgctatagcagcgcatcatggtttgaaacaatgtggaaa---ggtgcgaac 57
Query: 62 cataatttgctgctttagaattttaagga 90
||| |||||||||||||||||||||||||
Sbjct: 58 cattatttgctgctttagaattttaagga 86
>RF00455;mir-15;ABPL01061563.1/737-823 27751:Melanochromis auratus
Length = 87
Score = 99.6 bits (50), Expect = 6e-21
Identities = 80/89 (89%), Gaps = 2/89 (2%)
Strand = Plus / Plus
Query: 2 cccttagactgctttagcagcgcatcatggtttgtaatgatgtggaaaaaaggtgcaaac 61
|||||||||| || |||||||||||||||||||| || |||||||||| ||||| |||
Sbjct: 1 cccttagactactatagcagcgcatcatggtttgaaacaatgtggaaaa--ggtgcgaac 58
Query: 62 cataatttgctgctttagaattttaagga 90
|||||||||||||||||| ||||||||||
Sbjct: 59 cataatttgctgctttaggattttaagga 87
>RF00455;mir-15;BAAF04019869.1/1029-1115 8090:Oryzias latipes
(Japanese medaka)
Length = 87
Score = 65.9 bits (33), Expect = 8e-11
Identities = 75/88 (85%), Gaps = 2/88 (2%)
Strand = Plus / Plus
Query: 3 ccttagactgctttagcagcgcatcatggtttgtaatgatgtggaaaaaaggtgcaaacc 62
||||||| |||| |||||||||||||||||||| || | | ||||| |||| ||||
Sbjct: 2 ccttagaatgctgtagcagcgcatcatggtttgaaacagtcagaaaaaa--gtgcgaacc 59
Query: 63 ataatttgctgctttagaattttaagga 90
|| |||||||||||||||||||||||||
Sbjct: 60 attatttgctgctttagaattttaagga 87
>RF00455;mir-15;AAWZ01001750.1/5603-5688 28377:Anolis carolinensis
(green anole)
Length = 86
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 66 atttgctgctttagaattttaa 87
||||||||||||||||||||||
Sbjct: 62 atttgctgctttagaattttaa 83
