miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>34564_fru-mir-25:mirbase
Length = 82
Score = 163 bits (82), Expect = 2e-41
Identities = 82/82 (100%)
Strand = Plus / Plus
Query: 1 gctggtgttgagaggcggagacttgggcaattgccggccatcacagagggcattgcactt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gctggtgttgagaggcggagacttgggcaattgccggccatcacagagggcattgcactt 60
Query: 61 gtctcggtctgacagtgccggc 82
||||||||||||||||||||||
Sbjct: 61 gtctcggtctgacagtgccggc 82
>26963_eca-mir-25:mirbase
Length = 84
Score = 83.8 bits (42), Expect = 2e-17
Identities = 69/78 (88%)
Strand = Plus / Plus
Query: 5 gtgttgagaggcggagacttgggcaattgccggccatcacagagggcattgcacttgtct 64
|||||||||||||||||||||||||||||| || | | |||||||||||||||||
Sbjct: 6 gtgttgagaggcggagacttgggcaattgctggacgctgccctgggcattgcacttgtct 65
Query: 65 cggtctgacagtgccggc 82
||||||||||||||||||
Sbjct: 66 cggtctgacagtgccggc 83
>27550_lla-mir-25:mirbase
Length = 84
Score = 83.8 bits (42), Expect = 2e-17
Identities = 69/78 (88%)
Strand = Plus / Plus
Query: 5 gtgttgagaggcggagacttgggcaattgccggccatcacagagggcattgcacttgtct 64
|||||||||||||||||||||||||||||| || | | |||||||||||||||||
Sbjct: 6 gtgttgagaggcggagacttgggcaattgctggacgctgccctgggcattgcacttgtct 65
Query: 65 cggtctgacagtgccggc 82
||||||||||||||||||
Sbjct: 66 cggtctgacagtgccggc 83
>27669_mml-mir-25:mirbase
Length = 84
Score = 83.8 bits (42), Expect = 2e-17
Identities = 69/78 (88%)
Strand = Plus / Plus
Query: 5 gtgttgagaggcggagacttgggcaattgccggccatcacagagggcattgcacttgtct 64
|||||||||||||||||||||||||||||| || | | |||||||||||||||||
Sbjct: 6 gtgttgagaggcggagacttgggcaattgctggacgctgccctgggcattgcacttgtct 65
Query: 65 cggtctgacagtgccggc 82
||||||||||||||||||
Sbjct: 66 cggtctgacagtgccggc 83
>28185_mne-mir-25:mirbase
Length = 84
Score = 83.8 bits (42), Expect = 2e-17
Identities = 69/78 (88%)
Strand = Plus / Plus
Query: 5 gtgttgagaggcggagacttgggcaattgccggccatcacagagggcattgcacttgtct 64
|||||||||||||||||||||||||||||| || | | |||||||||||||||||
Sbjct: 6 gtgttgagaggcggagacttgggcaattgctggacgctgccctgggcattgcacttgtct 65
Query: 65 cggtctgacagtgccggc 82
||||||||||||||||||
Sbjct: 66 cggtctgacagtgccggc 83
>28271_ggo-mir-25:mirbase
Length = 84
Score = 83.8 bits (42), Expect = 2e-17
Identities = 69/78 (88%)
Strand = Plus / Plus
Query: 5 gtgttgagaggcggagacttgggcaattgccggccatcacagagggcattgcacttgtct 64
|||||||||||||||||||||||||||||| || | | |||||||||||||||||
Sbjct: 6 gtgttgagaggcggagacttgggcaattgctggacgctgccctgggcattgcacttgtct 65
Query: 65 cggtctgacagtgccggc 82
||||||||||||||||||
Sbjct: 66 cggtctgacagtgccggc 83
>28379_hsa-mir-25:mirbase
Length = 84
Score = 83.8 bits (42), Expect = 2e-17
Identities = 69/78 (88%)
Strand = Plus / Plus
Query: 5 gtgttgagaggcggagacttgggcaattgccggccatcacagagggcattgcacttgtct 64
|||||||||||||||||||||||||||||| || | | |||||||||||||||||
Sbjct: 6 gtgttgagaggcggagacttgggcaattgctggacgctgccctgggcattgcacttgtct 65
Query: 65 cggtctgacagtgccggc 82
||||||||||||||||||
Sbjct: 66 cggtctgacagtgccggc 83
>30058_ppa-mir-25:mirbase
Length = 84
Score = 83.8 bits (42), Expect = 2e-17
Identities = 69/78 (88%)
Strand = Plus / Plus
Query: 5 gtgttgagaggcggagacttgggcaattgccggccatcacagagggcattgcacttgtct 64
|||||||||||||||||||||||||||||| || | | |||||||||||||||||
Sbjct: 6 gtgttgagaggcggagacttgggcaattgctggacgctgccctgggcattgcacttgtct 65
Query: 65 cggtctgacagtgccggc 82
||||||||||||||||||
Sbjct: 66 cggtctgacagtgccggc 83
>30770_ppy-mir-25:mirbase
Length = 84
Score = 83.8 bits (42), Expect = 2e-17
Identities = 69/78 (88%)
Strand = Plus / Plus
Query: 5 gtgttgagaggcggagacttgggcaattgccggccatcacagagggcattgcacttgtct 64
|||||||||||||||||||||||||||||| || | | |||||||||||||||||
Sbjct: 6 gtgttgagaggcggagacttgggcaattgctggacgctgccctgggcattgcacttgtct 65
Query: 65 cggtctgacagtgccggc 82
||||||||||||||||||
Sbjct: 66 cggtctgacagtgccggc 83
>31793_mmu-mir-25:mirbase
Length = 84
Score = 83.8 bits (42), Expect = 2e-17
Identities = 69/78 (88%)
Strand = Plus / Plus
Query: 5 gtgttgagaggcggagacttgggcaattgccggccatcacagagggcattgcacttgtct 64
|||||||||||||||||||||||||||||| || | | |||||||||||||||||
Sbjct: 6 gtgttgagaggcggagacttgggcaattgctggacgctgccctgggcattgcacttgtct 65
Query: 65 cggtctgacagtgccggc 82
||||||||||||||||||
Sbjct: 66 cggtctgacagtgccggc 83
>33149_bta-mir-25:mirbase
Length = 84
Score = 83.8 bits (42), Expect = 2e-17
Identities = 69/78 (88%)
Strand = Plus / Plus
Query: 5 gtgttgagaggcggagacttgggcaattgccggccatcacagagggcattgcacttgtct 64
|||||||||||||||||||||||||||||| || | | |||||||||||||||||
Sbjct: 6 gtgttgagaggcggagacttgggcaattgctggacgctgccccgggcattgcacttgtct 65
Query: 65 cggtctgacagtgccggc 82
||||||||||||||||||
Sbjct: 66 cggtctgacagtgccggc 83
>34232_dre-mir-25:mirbase
Length = 82
Score = 83.8 bits (42), Expect = 2e-17
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 9 tgagaggcggagacttgggcaattgccggccatcacagagggcattgcacttgtctcggt 68
||||||||||||||||||||| ||||| | || |||| ||||||||||||||||||||
Sbjct: 9 tgagaggcggagacttgggcagctgccgtcattcccagaaggcattgcacttgtctcggt 68
Query: 69 ctgacagtgccggc 82
||||||||| ||||
Sbjct: 69 ctgacagtggcggc 82
>32677_rno-mir-25:mirbase
Length = 84
Score = 69.9 bits (35), Expect = 3e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 48 gggcattgcacttgtctcggtctgacagtgccggc 82
|||||||||||||||||||||||||||||||||||
Sbjct: 49 gggcattgcacttgtctcggtctgacagtgccggc 83
>27347_mdo-mir-25:mirbase
Length = 83
Score = 67.9 bits (34), Expect = 1e-12
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 5 gtgttgagaggcggagacttgggcaattgccggccatcacagagggcattgcacttgtct 64
|||||||||||||||||||||||||||||| | | | |||||||||||||||||
Sbjct: 6 gtgttgagaggcggagacttgggcaattgctgaactctgccctgggcattgcacttgtct 65
Query: 65 cggtctgacagtgc 78
||||||||||||||
Sbjct: 66 cggtctgacagtgc 79
>30165_ptr-mir-25:mirbase
Length = 84
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 5 gtgttgagaggcggagacttgggcaattgc 34
||||||||||||||||||||||||||||||
Sbjct: 6 gtgttgagaggcggagacttgggcaattgc 35
>25719_xtr-mir-25-1:mirbase
Length = 82
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 50 gcattgcacttgtctcggtctgacagtgccggc 82
|||||||||||||||||||||||||||| ||||
Sbjct: 50 gcattgcacttgtctcggtctgacagtgtcggc 82
>25720_xtr-mir-25-2:mirbase
Length = 82
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 50 gcattgcacttgtctcggtctgacagtgccggc 82
|||||||||||||||||||||||||||| ||||
Sbjct: 50 gcattgcacttgtctcggtctgacagtgtcggc 82
>26641_cfa-mir-25:mirbase
Length = 59
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 50 gcattgcacttgtctcggtctga 72
|||||||||||||||||||||||
Sbjct: 37 gcattgcacttgtctcggtctga 59
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 aggcggagacttgggcaattgc 34
||||||||||||||||||||||
Sbjct: 1 aggcggagacttgggcaattgc 22
