miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>34617_fru-mir-187:mirbase
Length = 92
Score = 113 bits (57), Expect = 1e-26
Identities = 63/65 (96%)
Strand = Plus / Plus
Query: 1 ggctgcaacacaggacatgggtcttgcctctgcccgccgctcgtgtcttgtgttgcagcc 60
||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 23 ggctgcaacacaggacatgggtcatgcctctgcccaccgctcgtgtcttgtgttgcagcc 82
Query: 61 agtgg 65
|||||
Sbjct: 83 agtgg 87
>34337_dre-mir-187:mirbase
Length = 89
Score = 65.9 bits (33), Expect = 3e-12
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 1 ggctgcaacacaggacatgggtcttgcctctgcccgccgctcgtgtcttgtgttgcagcc 60
||||||||||||||||||||| || |||| | ||||||||||||||||||||||||
Sbjct: 21 ggctgcaacacaggacatgggagctgtctctcactcccgctcgtgtcttgtgttgcagcc 80
Query: 61 agtgg 65
|||||
Sbjct: 81 agtgg 85
>25810_xtr-mir-187:mirbase
Length = 82
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 40 ctcgtgtcttgtgttgcagccagtgg 65
||||||||||||||||||||||||||
Sbjct: 49 ctcgtgtcttgtgttgcagccagtgg 74
>25980_gga-mir-187:mirbase
Length = 86
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 40 ctcgtgtcttgtgttgcagccag 62
|||||||||||||||||||||||
Sbjct: 55 ctcgtgtcttgtgttgcagccag 77
>26488_tgu-mir-187:mirbase
Length = 70
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 40 ctcgtgtcttgtgttgcagccag 62
|||||||||||||||||||||||
Sbjct: 40 ctcgtgtcttgtgttgcagccag 62
>27410_mdo-mir-187:mirbase
Length = 81
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 40 ctcgtgtcttgtgttgcagccag 62
|||||||||||||||||||||||
Sbjct: 50 ctcgtgtcttgtgttgcagccag 72
>31517_oan-mir-187:mirbase
Length = 79
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 40 ctcgtgtcttgtgttgcagccag 62
|||||||||||||||||||||||
Sbjct: 48 ctcgtgtcttgtgttgcagccag 70
>26742_cfa-mir-187:mirbase
Length = 68
Score = 42.1 bits (21), Expect = 4e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 40 ctcgtgtcttgtgttgcagcc 60
|||||||||||||||||||||
Sbjct: 40 ctcgtgtcttgtgttgcagcc 60
>27067_eca-mir-187:mirbase
Length = 61
Score = 42.1 bits (21), Expect = 4e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 40 ctcgtgtcttgtgttgcagcc 60
|||||||||||||||||||||
Sbjct: 39 ctcgtgtcttgtgttgcagcc 59
>27778_mml-mir-187:mirbase
Length = 109
Score = 42.1 bits (21), Expect = 4e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 40 ctcgtgtcttgtgttgcagcc 60
|||||||||||||||||||||
Sbjct: 70 ctcgtgtcttgtgttgcagcc 90
>28226_mne-mir-187:mirbase
Length = 109
Score = 42.1 bits (21), Expect = 4e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 40 ctcgtgtcttgtgttgcagcc 60
|||||||||||||||||||||
Sbjct: 70 ctcgtgtcttgtgttgcagcc 90
>28319_ggo-mir-187:mirbase
Length = 109
Score = 42.1 bits (21), Expect = 4e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 40 ctcgtgtcttgtgttgcagcc 60
|||||||||||||||||||||
Sbjct: 70 ctcgtgtcttgtgttgcagcc 90
>28494_hsa-mir-187:mirbase
Length = 109
Score = 42.1 bits (21), Expect = 4e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 40 ctcgtgtcttgtgttgcagcc 60
|||||||||||||||||||||
Sbjct: 70 ctcgtgtcttgtgttgcagcc 90
>30108_ppa-mir-187:mirbase
Length = 109
Score = 42.1 bits (21), Expect = 4e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 40 ctcgtgtcttgtgttgcagcc 60
|||||||||||||||||||||
Sbjct: 70 ctcgtgtcttgtgttgcagcc 90
>30876_ppy-mir-187:mirbase
Length = 109
Score = 42.1 bits (21), Expect = 4e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 40 ctcgtgtcttgtgttgcagcc 60
|||||||||||||||||||||
Sbjct: 70 ctcgtgtcttgtgttgcagcc 90
>31903_mmu-mir-187:mirbase
Length = 61
Score = 42.1 bits (21), Expect = 4e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 40 ctcgtgtcttgtgttgcagcc 60
|||||||||||||||||||||
Sbjct: 39 ctcgtgtcttgtgttgcagcc 59
>32773_rno-mir-187:mirbase
Length = 104
Score = 42.1 bits (21), Expect = 4e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 40 ctcgtgtcttgtgttgcagcc 60
|||||||||||||||||||||
Sbjct: 65 ctcgtgtcttgtgttgcagcc 85
>33255_bta-mir-187:mirbase
Length = 109
Score = 42.1 bits (21), Expect = 4e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 40 ctcgtgtcttgtgttgcagcc 60
|||||||||||||||||||||
Sbjct: 70 ctcgtgtcttgtgttgcagcc 90
>34017_ssc-mir-187:mirbase
Length = 78
Score = 42.1 bits (21), Expect = 4e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 40 ctcgtgtcttgtgttgcagcc 60
|||||||||||||||||||||
Sbjct: 46 ctcgtgtcttgtgttgcagcc 66
