miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>48553_gma-miR166r:pmrd
Length = 136
Score = 270 bits (136), Expect = 4e-73
Identities = 136/136 (100%)
Strand = Plus / Plus
Query: 30 ggggaatgcagtgtggtccaaggagatgatatatcacttcaccatactcatatcttcaca 89
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggggaatgcagtgtggtccaaggagatgatatatcacttcaccatactcatatcttcaca 60
Query: 90 aactcatcagattcagatgtaataataatttgtaatatatgcatattatgtctcctcgga 149
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aactcatcagattcagatgtaataataatttgtaatatatgcatattatgtctcctcgga 120
Query: 150 ccaggcttcattccct 165
||||||||||||||||
Sbjct: 121 ccaggcttcattccct 136
>51633_ptc-miR166i:pmrd
Length = 103
Score = 56.0 bits (28), Expect = 1e-08
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 142 tcctcggaccaggcttcattcccttcaattac 173
||||||||||||||||||||||| ||||||||
Sbjct: 71 tcctcggaccaggcttcattcccctcaattac 102
>51636_ptc-miR166l:pmrd
Length = 97
Score = 54.0 bits (27), Expect = 4e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 142 tcctcggaccaggcttcattcccttcaatta 172
||||||||||||||||||||||| |||||||
Sbjct: 65 tcctcggaccaggcttcattcccctcaatta 95
>54792_vvi-miR166d:pmrd
Length = 160
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 143 cctcggaccaggcttcattcccttcaat 170
|||||||||||||||||||||| |||||
Sbjct: 127 cctcggaccaggcttcattcccctcaat 154
>48856_osa-miR166m:pmrd
Length = 200
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 143 cctcggaccaggcttcattccctt 166
||||||||||||||||||||||||
Sbjct: 145 cctcggaccaggcttcattccctt 168
>46870_aqc-miR166e:pmrd
Length = 147
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 145 tcggaccaggcttcattcccttcaatt 171
|||||||||||||||||||| ||||||
Sbjct: 121 tcggaccaggcttcattcccctcaatt 147
>54972_zma-miR166p:pmrd
Length = 95
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 144 ctcggaccaggcttcattcccttcaa 169
||||||||||||||||||||| ||||
Sbjct: 70 ctcggaccaggcttcattcccctcaa 95
>54425_sbi-miR166j:pmrd
Length = 108
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 143 cctcggaccaggcttcattccc 164
||||||||||||||||||||||
Sbjct: 83 cctcggaccaggcttcattccc 104
>51373_ppt-miR166f:pmrd
Length = 123
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 143 cctcggaccaggcttcattccc 164
||||||||||||||||||||||
Sbjct: 72 cctcggaccaggcttcattccc 93
>48849_osa-miR166f:pmrd
Length = 107
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 144 ctcggaccaggcttcattcccttcaa 169
||||||||||||||||||||| ||||
Sbjct: 71 ctcggaccaggcttcattcccctcaa 96
>48847_osa-miR166d:pmrd
Length = 125
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 144 ctcggaccaggcttcattcccttcaa 169
||||||||||||||||||||| ||||
Sbjct: 90 ctcggaccaggcttcattcccctcaa 115
>46951_ath-miR166g:pmrd
Length = 122
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 144 ctcggaccaggcttcattcccttcaa 169
||||||||||||||||||||| ||||
Sbjct: 84 ctcggaccaggcttcattcccctcaa 109
>54974_zma-miR166r:pmrd
Length = 83
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 144 ctcggaccaggcttcattccc 164
|||||||||||||||||||||
Sbjct: 62 ctcggaccaggcttcattccc 82
>54973_zma-miR166q:pmrd
Length = 91
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 144 ctcggaccaggcttcattccc 164
|||||||||||||||||||||
Sbjct: 68 ctcggaccaggcttcattccc 88
>54971_zma-miR166o:pmrd
Length = 95
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 144 ctcggaccaggcttcattccc 164
|||||||||||||||||||||
Sbjct: 68 ctcggaccaggcttcattccc 88
>54970_zma-miR166n:pmrd
Length = 96
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 144 ctcggaccaggcttcattccc 164
|||||||||||||||||||||
Sbjct: 73 ctcggaccaggcttcattccc 93
>54965_zma-miR166i:pmrd
Length = 83
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 144 ctcggaccaggcttcattccc 164
|||||||||||||||||||||
Sbjct: 62 ctcggaccaggcttcattccc 82
>54961_zma-miR166e:pmrd
Length = 87
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 144 ctcggaccaggcttcattccc 164
|||||||||||||||||||||
Sbjct: 66 ctcggaccaggcttcattccc 86
>54960_zma-miR166d:pmrd
Length = 104
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 144 ctcggaccaggcttcattccc 164
|||||||||||||||||||||
Sbjct: 83 ctcggaccaggcttcattccc 103
>54959_zma-miR166c:pmrd
Length = 92
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 144 ctcggaccaggcttcattccc 164
|||||||||||||||||||||
Sbjct: 71 ctcggaccaggcttcattccc 91
>54958_zma-miR166b:pmrd
Length = 116
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 144 ctcggaccaggcttcattccc 164
|||||||||||||||||||||
Sbjct: 95 ctcggaccaggcttcattccc 115
>54957_zma-miR166a:pmrd
Length = 213
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 144 ctcggaccaggcttcattccc 164
|||||||||||||||||||||
Sbjct: 188 ctcggaccaggcttcattccc 208
>54796_vvi-miR166h:pmrd
Length = 100
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 144 ctcggaccaggcttcattccc 164
|||||||||||||||||||||
Sbjct: 68 ctcggaccaggcttcattccc 88
>54795_vvi-miR166g:pmrd
Length = 100
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 145 tcggaccaggcttcattcccttcaa 169
|||||||||||||||||||| ||||
Sbjct: 69 tcggaccaggcttcattcccctcaa 93
>54794_vvi-miR166f:pmrd
Length = 100
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 145 tcggaccaggcttcattcccttcaa 169
|||||||||||||||||||| ||||
Sbjct: 69 tcggaccaggcttcattcccctcaa 93
>54577_smo-miR166b:pmrd
Length = 136
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 144 ctcggaccaggcttcattccc 164
|||||||||||||||||||||
Sbjct: 98 ctcggaccaggcttcattccc 118
>54576_smo-miR166a:pmrd
Length = 145
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 144 ctcggaccaggcttcattccc 164
|||||||||||||||||||||
Sbjct: 107 ctcggaccaggcttcattccc 127
>54543_sly-miR166a:pmrd
Length = 111
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 145 tcggaccaggcttcattcccttcaa 169
|||||||||||||||||||| ||||
Sbjct: 86 tcggaccaggcttcattcccctcaa 110
>54424_sbi-miR166i:pmrd
Length = 86
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 144 ctcggaccaggcttcattccc 164
|||||||||||||||||||||
Sbjct: 65 ctcggaccaggcttcattccc 85
>54423_sbi-miR166h:pmrd
Length = 185
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 144 ctcggaccaggcttcattccc 164
|||||||||||||||||||||
Sbjct: 161 ctcggaccaggcttcattccc 181
>54419_sbi-miR166d:pmrd
Length = 87
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 144 ctcggaccaggcttcattccc 164
|||||||||||||||||||||
Sbjct: 66 ctcggaccaggcttcattccc 86
>54416_sbi-miR166a:pmrd
Length = 108
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 144 ctcggaccaggcttcattccc 164
|||||||||||||||||||||
Sbjct: 87 ctcggaccaggcttcattccc 107
>54379_pvu-miR166:pmrd
Length = 144
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 144 ctcggaccaggcttcattccc 164
|||||||||||||||||||||
Sbjct: 113 ctcggaccaggcttcattccc 133
>51637_ptc-miR166m:pmrd
Length = 105
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 144 ctcggaccaggcttcattccc 164
|||||||||||||||||||||
Sbjct: 75 ctcggaccaggcttcattccc 95
>51632_ptc-miR166h:pmrd
Length = 101
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 144 ctcggaccaggcttcattccc 164
|||||||||||||||||||||
Sbjct: 71 ctcggaccaggcttcattccc 91
>51631_ptc-miR166g:pmrd
Length = 103
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 144 ctcggaccaggcttcattccc 164
|||||||||||||||||||||
Sbjct: 73 ctcggaccaggcttcattccc 93
>51630_ptc-miR166f:pmrd
Length = 105
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 145 tcggaccaggcttcattcccttcaa 169
|||||||||||||||||||| ||||
Sbjct: 76 tcggaccaggcttcattcccctcaa 100
>51628_ptc-miR166d:pmrd
Length = 105
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 145 tcggaccaggcttcattcccttcaa 169
|||||||||||||||||||| ||||
Sbjct: 76 tcggaccaggcttcattcccctcaa 100
>48845_osa-miR166b:pmrd
Length = 206
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 144 ctcggaccaggcttcattccc 164
|||||||||||||||||||||
Sbjct: 167 ctcggaccaggcttcattccc 187
>48844_osa-miR166a:pmrd
Length = 145
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 144 ctcggaccaggcttcattccc 164
|||||||||||||||||||||
Sbjct: 109 ctcggaccaggcttcattccc 129
>48714_mtr-miR166d:pmrd
Length = 97
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 144 ctcggaccaggcttcattccc 164
|||||||||||||||||||||
Sbjct: 76 ctcggaccaggcttcattccc 96
>48711_mtr-miR165:pmrd
Length = 82
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 144 ctcggaccaggcttcattccc 164
|||||||||||||||||||||
Sbjct: 61 ctcggaccaggcttcattccc 81
>48552_gma-miR166q:pmrd
Length = 156
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 144 ctcggaccaggcttcattccc 164
|||||||||||||||||||||
Sbjct: 135 ctcggaccaggcttcattccc 155
>48549_gma-miR166b:pmrd
Length = 167
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 144 ctcggaccaggcttcattccc 164
|||||||||||||||||||||
Sbjct: 127 ctcggaccaggcttcattccc 147
>48345_bna-miR166d:pmrd
Length = 128
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 144 ctcggaccaggcttcattccc 164
|||||||||||||||||||||
Sbjct: 76 ctcggaccaggcttcattccc 96
>48344_bna-miR166c:pmrd
Length = 128
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 145 tcggaccaggcttcattcccttcaa 169
|||||||||||||||||||| ||||
Sbjct: 93 tcggaccaggcttcattcccctcaa 117
>48343_bna-miR166b:pmrd
Length = 118
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 145 tcggaccaggcttcattcccttcaa 169
|||||||||||||||||||| ||||
Sbjct: 91 tcggaccaggcttcattcccctcaa 115
>46950_ath-miR166f:pmrd
Length = 105
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 145 tcggaccaggcttcattcccttcaa 169
|||||||||||||||||||| ||||
Sbjct: 78 tcggaccaggcttcattcccctcaa 102
>46949_ath-miR166e:pmrd
Length = 143
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 145 tcggaccaggcttcattcccttcaa 169
|||||||||||||||||||| ||||
Sbjct: 119 tcggaccaggcttcattcccctcaa 143
>46948_ath-miR166d:pmrd
Length = 113
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 144 ctcggaccaggcttcattccc 164
|||||||||||||||||||||
Sbjct: 86 ctcggaccaggcttcattccc 106
>46947_ath-miR166c:pmrd
Length = 139
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 144 ctcggaccaggcttcattccc 164
|||||||||||||||||||||
Sbjct: 102 ctcggaccaggcttcattccc 122
>46866_aqc-miR166a:pmrd
Length = 111
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 143 cctcggaccaggcttcattcc 163
|||||||||||||||||||||
Sbjct: 84 cctcggaccaggcttcattcc 104
>54976_zma-miR166t:pmrd
Length = 76
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 145 tcggaccaggcttcattccc 164
||||||||||||||||||||
Sbjct: 56 tcggaccaggcttcattccc 75
>54975_zma-miR166s:pmrd
Length = 78
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 145 tcggaccaggcttcattccc 164
||||||||||||||||||||
Sbjct: 58 tcggaccaggcttcattccc 77
>54968_zma-miR166l:pmrd
Length = 137
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 144 ctcggaccaggcttcattcc 163
||||||||||||||||||||
Sbjct: 97 ctcggaccaggcttcattcc 116
>54964_zma-miR166h:pmrd
Length = 76
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 145 tcggaccaggcttcattccc 164
||||||||||||||||||||
Sbjct: 56 tcggaccaggcttcattccc 75
>54963_zma-miR166g:pmrd
Length = 126
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 145 tcggaccaggcttcattccc 164
||||||||||||||||||||
Sbjct: 106 tcggaccaggcttcattccc 125
>54962_zma-miR166f:pmrd
Length = 78
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 145 tcggaccaggcttcattccc 164
||||||||||||||||||||
Sbjct: 58 tcggaccaggcttcattccc 77
>54793_vvi-miR166e:pmrd
Length = 166
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 145 tcggaccaggcttcattccc 164
||||||||||||||||||||
Sbjct: 135 tcggaccaggcttcattccc 154
>54791_vvi-miR166c:pmrd
Length = 160
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 145 tcggaccaggcttcattccc 164
||||||||||||||||||||
Sbjct: 129 tcggaccaggcttcattccc 148
>54789_vvi-miR166a:pmrd
Length = 130
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 144 ctcggaccaggcttcattcc 163
||||||||||||||||||||
Sbjct: 99 ctcggaccaggcttcattcc 118
