miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>31456_oan-mir-31:mirbase
Length = 136
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 11 tggagaaaaggcaagatgttggcatagctgt 41
|||||| ||||||||||||||||||||||||
Sbjct: 9 tggagagaaggcaagatgttggcatagctgt 39
>24656_bfl-mir-31:mirbase
Length = 101
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 15 gaaaaggcaagatgttggcatagctgt 41
|||| ||||||||||||||||||||||
Sbjct: 15 gaaatggcaagatgttggcatagctgt 41
>25738_xtr-mir-31:mirbase
Length = 88
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 19 aggcaagatgttggcatagctgt 41
|||||||||||||||||||||||
Sbjct: 17 aggcaagatgttggcatagctgt 39
>25922_gga-mir-31:mirbase
Length = 94
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 19 aggcaagatgttggcatagctgt 41
|||||||||||||||||||||||
Sbjct: 25 aggcaagatgttggcatagctgt 47
>26429_tgu-mir-31:mirbase
Length = 109
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 19 aggcaagatgttggcatagctgt 41
|||||||||||||||||||||||
Sbjct: 25 aggcaagatgttggcatagctgt 47
>27357_mdo-mir-31:mirbase
Length = 87
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 19 aggcaagatgttggcatagctgt 41
|||||||||||||||||||||||
Sbjct: 12 aggcaagatgttggcatagctgt 34
>34869_sko-mir-31:mirbase
Length = 101
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 19 aggcaagatgttggcatagctgt 41
|||||||||||||||||||||||
Sbjct: 21 aggcaagatgttggcatagctgt 43
>38106_bma-mir-72:mirbase
Length = 115
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 18 aaggcaagatgttggcatagctg 40
|||||||||||||||||||||||
Sbjct: 17 aaggcaagatgttggcatagctg 39
>38856_lgi-mir-31:mirbase
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 19 aggcaagatgttggcatagctg 40
||||||||||||||||||||||
Sbjct: 21 aggcaagatgttggcatagctg 42
>38737_cte-mir-31:mirbase
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 19 aggcaagatgttggcatagctg 40
||||||||||||||||||||||
Sbjct: 21 aggcaagatgttggcatagctg 42
>38622_ppc-mir-72:mirbase
Length = 109
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 19 aggcaagatgttggcatagctg 40
||||||||||||||||||||||
Sbjct: 24 aggcaagatgttggcatagctg 45
>38534_crm-mir-72:mirbase
Length = 113
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 19 aggcaagatgttggcatagctg 40
||||||||||||||||||||||
Sbjct: 21 aggcaagatgttggcatagctg 42
>34252_dre-mir-31:mirbase
Length = 72
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 20 ggcaagatgttggcatagctgt 41
||||||||||||||||||||||
Sbjct: 9 ggcaagatgttggcatagctgt 30
>38308_cel-mir-72:mirbase
Length = 99
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 19 aggcaagatgttggcatagctg 40
||||||||||||||||||||||
Sbjct: 17 aggcaagatgttggcatagctg 38
>35182_aae-mir-31:mirbase
Length = 149
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 ggcaagatgttggcatagctg 40
|||||||||||||||||||||
Sbjct: 52 ggcaagatgttggcatagctg 72
>36013_cqu-mir-31:mirbase
Length = 87
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 ggcaagatgttggcatagctg 40
|||||||||||||||||||||
Sbjct: 13 ggcaagatgttggcatagctg 33
>24814_cin-mir-31:mirbase
Length = 102
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 20 ggcaagatgttggcatagct 39
||||||||||||||||||||
Sbjct: 17 ggcaagatgttggcatagct 36
>25319_csa-mir-31:mirbase
Length = 82
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 20 ggcaagatgttggcatagct 39
||||||||||||||||||||
Sbjct: 17 ggcaagatgttggcatagct 36
