miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00103;mir-1;ABEP02026713.1/2484-2559 7739:Branchiostoma
floridae (Florida lancelet)
Length = 76
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 54 tgtatggaatgtaatgaagtatgtattgttag 85
|||||||||||||| ||||||||||| |||||
Sbjct: 44 tgtatggaatgtaaagaagtatgtatggttag 75
>RF00103;mir-1;AAGJ02015940.1/12697-12776 7668:Strongylocentrotus
purpuratus
Length = 80
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 56 tatggaatgtaatgaagtatgtattg 81
|||||||||||| |||||||||||||
Sbjct: 50 tatggaatgtaaagaagtatgtattg 75