miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36257_dgr-mir-10:mirbase
Length = 77
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 18 tctaccctgtagatccgaatttgtggtac 46
|||||||||||||||||||||||| ||||
Sbjct: 6 tctaccctgtagatccgaatttgttgtac 34
>36767_dmo-mir-10:mirbase
Length = 77
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 18 tctaccctgtagatccgaatttgtggtac 46
|||||||||||||||||||||||| ||||
Sbjct: 6 tctaccctgtagatccgaatttgttgtac 34
>34964_isc-mir-10:mirbase
Length = 73
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 18 tctaccctgtagatccgaatttgt 41
||||||||||||||||||||||||
Sbjct: 6 tctaccctgtagatccgaatttgt 29
>35001_dpu-mir-10:mirbase
Length = 101
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 18 tctaccctgtagatccgaatttgt 41
||||||||||||||||||||||||
Sbjct: 18 tctaccctgtagatccgaatttgt 41
>35050_api-mir-10:mirbase
Length = 83
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 18 tctaccctgtagatccgaatttgt 41
||||||||||||||||||||||||
Sbjct: 11 tctaccctgtagatccgaatttgt 34
>35177_aae-mir-10:mirbase
Length = 89
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 18 tctaccctgtagatccgaatttgt 41
||||||||||||||||||||||||
Sbjct: 12 tctaccctgtagatccgaatttgt 35
>35348_ame-mir-10-1:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 18 tctaccctgtagatccgaatttgt 41
||||||||||||||||||||||||
Sbjct: 19 tctaccctgtagatccgaatttgt 42
>35349_ame-mir-10-2:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 18 tctaccctgtagatccgaatttgt 41
||||||||||||||||||||||||
Sbjct: 19 tctaccctgtagatccgaatttgt 42
>35523_bmo-mir-10:mirbase
Length = 84
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 18 tctaccctgtagatccgaatttgt 41
||||||||||||||||||||||||
Sbjct: 12 tctaccctgtagatccgaatttgt 35
>36008_cqu-mir-10:mirbase
Length = 86
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 18 tctaccctgtagatccgaatttgt 41
||||||||||||||||||||||||
Sbjct: 10 tctaccctgtagatccgaatttgt 33
>36091_dan-mir-10:mirbase
Length = 77
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 18 tctaccctgtagatccgaatttgt 41
||||||||||||||||||||||||
Sbjct: 6 tctaccctgtagatccgaatttgt 29
>36169_der-mir-10:mirbase
Length = 77
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 18 tctaccctgtagatccgaatttgt 41
||||||||||||||||||||||||
Sbjct: 6 tctaccctgtagatccgaatttgt 29
>36353_dme-mir-10:mirbase
Length = 77
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 18 tctaccctgtagatccgaatttgt 41
||||||||||||||||||||||||
Sbjct: 6 tctaccctgtagatccgaatttgt 29
>36354_dme-mir-10:mirbase
Length = 77
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 18 tctaccctgtagatccgaatttgt 41
||||||||||||||||||||||||
Sbjct: 6 tctaccctgtagatccgaatttgt 29
>36840_dpe-mir-10:mirbase
Length = 77
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 18 tctaccctgtagatccgaatttgt 41
||||||||||||||||||||||||
Sbjct: 6 tctaccctgtagatccgaatttgt 29
>36916_dps-mir-10:mirbase
Length = 77
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 18 tctaccctgtagatccgaatttgt 41
||||||||||||||||||||||||
Sbjct: 6 tctaccctgtagatccgaatttgt 29
>37129_dse-mir-10:mirbase
Length = 77
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 18 tctaccctgtagatccgaatttgt 41
||||||||||||||||||||||||
Sbjct: 6 tctaccctgtagatccgaatttgt 29
>37205_dsi-mir-10:mirbase
Length = 77
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 18 tctaccctgtagatccgaatttgt 41
||||||||||||||||||||||||
Sbjct: 6 tctaccctgtagatccgaatttgt 29
>37420_dwi-mir-10:mirbase
Length = 78
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 18 tctaccctgtagatccgaatttgt 41
||||||||||||||||||||||||
Sbjct: 6 tctaccctgtagatccgaatttgt 29
>37498_dya-mir-10:mirbase
Length = 77
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 18 tctaccctgtagatccgaatttgt 41
||||||||||||||||||||||||
Sbjct: 6 tctaccctgtagatccgaatttgt 29
>37604_nlo-mir-10:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 18 tctaccctgtagatccgaatttgt 41
||||||||||||||||||||||||
Sbjct: 19 tctaccctgtagatccgaatttgt 42
>37637_nvi-mir-10:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 18 tctaccctgtagatccgaatttgt 41
||||||||||||||||||||||||
Sbjct: 19 tctaccctgtagatccgaatttgt 42
>37705_tca-mir-10:mirbase
Length = 71
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 18 tctaccctgtagatccgaatttgt 41
||||||||||||||||||||||||
Sbjct: 8 tctaccctgtagatccgaatttgt 31
>37706_tca-mir-10:mirbase
Length = 71
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 18 tctaccctgtagatccgaatttgt 41
||||||||||||||||||||||||
Sbjct: 8 tctaccctgtagatccgaatttgt 31
>38853_lgi-mir-10:mirbase
Length = 101
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 taccctgtagatccgaatttgtg 42
|||||||||||||||||||||||
Sbjct: 21 taccctgtagatccgaatttgtg 43
>24650_bfl-mir-10a:mirbase
Length = 76
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 taccctgtagatccgaatttgtg 42
|||||||||||||||||||||||
Sbjct: 8 taccctgtagatccgaatttgtg 30
>25694_xtr-mir-10a:mirbase
Length = 100
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 taccctgtagatccgaatttgtg 42
|||||||||||||||||||||||
Sbjct: 22 taccctgtagatccgaatttgtg 44
>25889_gga-mir-10a:mirbase
Length = 74
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 taccctgtagatccgaatttgtg 42
|||||||||||||||||||||||
Sbjct: 8 taccctgtagatccgaatttgtg 30
>26621_cfa-mir-10:mirbase
Length = 63
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 taccctgtagatccgaatttgtg 42
|||||||||||||||||||||||
Sbjct: 1 taccctgtagatccgaatttgtg 23
>26943_eca-mir-10a:mirbase
Length = 110
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 taccctgtagatccgaatttgtg 42
|||||||||||||||||||||||
Sbjct: 22 taccctgtagatccgaatttgtg 44
>27331_mdo-mir-10a:mirbase
Length = 90
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 taccctgtagatccgaatttgtg 42
|||||||||||||||||||||||
Sbjct: 15 taccctgtagatccgaatttgtg 37
>27477_age-mir-10a:mirbase
Length = 110
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 taccctgtagatccgaatttgtg 42
|||||||||||||||||||||||
Sbjct: 22 taccctgtagatccgaatttgtg 44
>27587_sla-mir-10a:mirbase
Length = 110
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 taccctgtagatccgaatttgtg 42
|||||||||||||||||||||||
Sbjct: 22 taccctgtagatccgaatttgtg 44
>27648_mml-mir-10a:mirbase
Length = 109
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 taccctgtagatccgaatttgtg 42
|||||||||||||||||||||||
Sbjct: 22 taccctgtagatccgaatttgtg 44
>28256_ggo-mir-10a:mirbase
Length = 110
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 taccctgtagatccgaatttgtg 42
|||||||||||||||||||||||
Sbjct: 22 taccctgtagatccgaatttgtg 44
>28358_hsa-mir-10a:mirbase
Length = 110
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 taccctgtagatccgaatttgtg 42
|||||||||||||||||||||||
Sbjct: 22 taccctgtagatccgaatttgtg 44
>30040_ppa-mir-10a:mirbase
Length = 110
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 taccctgtagatccgaatttgtg 42
|||||||||||||||||||||||
Sbjct: 22 taccctgtagatccgaatttgtg 44
>30144_ptr-mir-10a:mirbase
Length = 109
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 taccctgtagatccgaatttgtg 42
|||||||||||||||||||||||
Sbjct: 21 taccctgtagatccgaatttgtg 43
>31423_oan-mir-10a:mirbase
Length = 122
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 taccctgtagatccgaatttgtg 42
|||||||||||||||||||||||
Sbjct: 28 taccctgtagatccgaatttgtg 50
>31773_mmu-mir-10a:mirbase
Length = 110
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 taccctgtagatccgaatttgtg 42
|||||||||||||||||||||||
Sbjct: 22 taccctgtagatccgaatttgtg 44
>32655_rno-mir-10a:mirbase
Length = 110
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 taccctgtagatccgaatttgtg 42
|||||||||||||||||||||||
Sbjct: 22 taccctgtagatccgaatttgtg 44
>32656_rno-mir-10a:mirbase
Length = 110
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 taccctgtagatccgaatttgtg 42
|||||||||||||||||||||||
Sbjct: 22 taccctgtagatccgaatttgtg 44
>33126_bta-mir-10a:mirbase
Length = 109
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 taccctgtagatccgaatttgtg 42
|||||||||||||||||||||||
Sbjct: 22 taccctgtagatccgaatttgtg 44
>33909_ssc-mir-10a:mirbase
Length = 80
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 taccctgtagatccgaatttgtg 42
|||||||||||||||||||||||
Sbjct: 9 taccctgtagatccgaatttgtg 31
>34197_dre-mir-10a:mirbase
Length = 99
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 taccctgtagatccgaatttgtg 42
|||||||||||||||||||||||
Sbjct: 18 taccctgtagatccgaatttgtg 40
>34809_spu-mir-10:mirbase
Length = 110
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 21 accctgtagatccgaatttgtg 42
||||||||||||||||||||||
Sbjct: 27 accctgtagatccgaatttgtg 48
>37343_dvi-mir-10:mirbase
Length = 77
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 21 accctgtagatccgaatttgtggtac 46
||||||||||||||||||||| ||||
Sbjct: 9 accctgtagatccgaatttgttgtac 34
>37563_lmi-mir-10:mirbase
Length = 59
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 20 taccctgtagatccgaatttgt 41
||||||||||||||||||||||
Sbjct: 1 taccctgtagatccgaatttgt 22
>34543_fru-mir-10c:mirbase
Length = 102
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 18 tctaccctgtagatccgaatttgtg 42
||||||||||||||||| |||||||
Sbjct: 13 tctaccctgtagatccggatttgtg 37
>34691_tni-mir-10c:mirbase
Length = 108
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 18 tctaccctgtagatccgaatttgtg 42
||||||||||||||||| |||||||
Sbjct: 19 tctaccctgtagatccggatttgtg 43
>35278_aga-mir-10:mirbase
Length = 102
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 accctgtagatccgaatttgt 41
|||||||||||||||||||||
Sbjct: 22 accctgtagatccgaatttgt 42
