miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>34865_sko-mir-9:mirbase
Length = 79
Score = 157 bits (79), Expect = 2e-39
Identities = 79/79 (100%)
Strand = Plus / Plus
Query: 13 ctctcgttttctctttggttatctagctgtatgagtgtacatgacattataaagctaggt 72
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctctcgttttctctttggttatctagctgtatgagtgtacatgacattataaagctaggt 60
Query: 73 taccaaagacaaaaacaga 91
|||||||||||||||||||
Sbjct: 61 taccaaagacaaaaacaga 79
>25887_gga-mir-9-1:mirbase
Length = 88
Score = 71.9 bits (36), Expect = 8e-14
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 19 ttttctctttggttatctagctgtatgagtgtacatgacattataaagctag 70
||||||||||||||||||||||||||||||||| ||| || ||||||||||
Sbjct: 11 ttttctctttggttatctagctgtatgagtgtatgtgatatcataaagctag 62
>35000_dpu-mir-9:mirbase
Length = 101
Score = 69.9 bits (35), Expect = 3e-13
Identities = 57/63 (90%), Gaps = 1/63 (1%)
Strand = Plus / Plus
Query: 19 ttttctctttggttatctagctgtatgagtg-tacatgacattataaagctaggttacca 77
|||| |||||||||||||||||||||||||| || | ||| | |||||||||||||||||
Sbjct: 16 ttttttctttggttatctagctgtatgagtgttagaagacgtcataaagctaggttacca 75
Query: 78 aag 80
|||
Sbjct: 76 aag 78
>35007_dpu-mir-79:mirbase
Length = 101
Score = 69.9 bits (35), Expect = 3e-13
Identities = 57/63 (90%), Gaps = 1/63 (1%)
Strand = Plus / Plus
Query: 19 ttttctctttggttatctagctgtatgagtg-tacatgacattataaagctaggttacca 77
|||| |||||||||||||||||||||||||| || | ||| | |||||||||||||||||
Sbjct: 18 ttttttctttggttatctagctgtatgagtgttagaagacgtcataaagctaggttacca 77
Query: 78 aag 80
|||
Sbjct: 78 aag 80
>34967_isc-mir-79:mirbase
Length = 101
Score = 65.9 bits (33), Expect = 5e-12
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 24 tctttggttatctagctgtatgagtgtacatgacattataaagctaggttaccaaag 80
|||||||||||||||||||||||||| | |||| ||||||||||||||||||||
Sbjct: 24 tctttggttatctagctgtatgagtgatattaacatcataaagctaggttaccaaag 80
>38861_lgi-mir-79:mirbase
Length = 101
Score = 63.9 bits (32), Expect = 2e-11
Identities = 62/71 (87%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 19 ttttctctttggttatctagctgtatgagtgtacatga--cattataaagctaggttacc 76
|||| ||||||||||||||||||||||| || | || ||||||||||||||||||||
Sbjct: 17 ttttgtctttggttatctagctgtatgattgaaatagaaacattataaagctaggttacc 76
Query: 77 aaagacaaaaa 87
|||| ||||||
Sbjct: 77 aaaggcaaaaa 87
>38852_lgi-mir-9:mirbase
Length = 102
Score = 63.9 bits (32), Expect = 2e-11
Identities = 62/71 (87%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 19 ttttctctttggttatctagctgtatgagtgtacatga--cattataaagctaggttacc 76
|||| ||||||||||||||||||||||| || | || ||||||||||||||||||||
Sbjct: 16 ttttgtctttggttatctagctgtatgattgaaatagaaacattataaagctaggttacc 75
Query: 77 aaagacaaaaa 87
|||| ||||||
Sbjct: 76 aaaggcaaaaa 86
>34193_dre-mir-9-4:mirbase
Length = 87
Score = 63.9 bits (32), Expect = 2e-11
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 19 ttttctctttggttatctagctgtatgagtgtacatgacattataaagctag 70
|||||||||||||||||||||||||||||| || ||| || ||||||||||
Sbjct: 10 ttttctctttggttatctagctgtatgagtttatgtgatatcataaagctag 61
>34808_spu-mir-9:mirbase
Length = 101
Score = 63.9 bits (32), Expect = 2e-11
Identities = 59/66 (89%), Gaps = 4/66 (6%)
Strand = Plus / Plus
Query: 19 ttttctctttggttatctagctgtatgag---tgtacatgacattataaagctaggttac 75
||||||||||||||||||||||||||||| ||| ||| ||| |||||||||||||||
Sbjct: 16 ttttctctttggttatctagctgtatgagtgatgtcaatg-catcataaagctaggttac 74
Query: 76 caaaga 81
||||||
Sbjct: 75 caaaga 80
>34817_spu-mir-79:mirbase
Length = 101
Score = 63.9 bits (32), Expect = 2e-11
Identities = 59/66 (89%), Gaps = 4/66 (6%)
Strand = Plus / Plus
Query: 19 ttttctctttggttatctagctgtatgag---tgtacatgacattataaagctaggttac 75
||||||||||||||||||||||||||||| ||| ||| ||| |||||||||||||||
Sbjct: 17 ttttctctttggttatctagctgtatgagtgatgtcaatg-catcataaagctaggttac 75
Query: 76 caaaga 81
||||||
Sbjct: 76 caaaga 81
>35275_aga-mir-9a:mirbase
Length = 81
Score = 61.9 bits (31), Expect = 8e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 21 ttctctttggttatctagctgtatgagtgta 51
|||||||||||||||||||||||||||||||
Sbjct: 8 ttctctttggttatctagctgtatgagtgta 38
>34196_dre-mir-9-7:mirbase
Length = 84
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 19 ttttctctttggttatctagctgtatgagt 48
||||||||||||||||||||||||||||||
Sbjct: 9 ttttctctttggttatctagctgtatgagt 38
>37415_dwi-mir-9a:mirbase
Length = 78
Score = 60.0 bits (30), Expect = 3e-10
Identities = 49/54 (90%), Gaps = 1/54 (1%)
Strand = Plus / Plus
Query: 24 tctttggttatctagctgtatgagtg-tacatgacattataaagctaggttacc 76
|||||||||||||||||||||||||| ||||| || | |||||||||| |||||
Sbjct: 10 tctttggttatctagctgtatgagtgatacataacgtcataaagctagcttacc 63
>27329_mdo-mir-9-1:mirbase
Length = 90
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 22 tctctttggttatctagctgtatgagtgt 50
|||||||||||||||||||||||||||||
Sbjct: 14 tctctttggttatctagctgtatgagtgt 42
>35172_aae-mir-9a-1:mirbase
Length = 81
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 21 ttctctttggttatctagctgtatgagtg 49
|||||||||||||||||||||||||||||
Sbjct: 8 ttctctttggttatctagctgtatgagtg 36
>35173_aae-mir-9a-2:mirbase
Length = 81
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 21 ttctctttggttatctagctgtatgagtg 49
|||||||||||||||||||||||||||||
Sbjct: 8 ttctctttggttatctagctgtatgagtg 36
>35519_bmo-mir-9a:mirbase
Length = 90
Score = 58.0 bits (29), Expect = 1e-09
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 24 tctttggttatctagctgtatgagtgtacatgacattataaagctaggttacc 76
||||||||||||||||||||||||| | |||| | ||||||||||||||||
Sbjct: 18 tctttggttatctagctgtatgagtattactgacgtcataaagctaggttacc 70
>38743_cte-mir-79:mirbase
Length = 101
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 19 ttttctctttggttatctagctgtatga 46
||||||||||||||||||||||||||||
Sbjct: 18 ttttctctttggttatctagctgtatga 45
>38729_cte-mir-9:mirbase
Length = 101
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 19 ttttctctttggttatctagctgtatga 46
||||||||||||||||||||||||||||
Sbjct: 16 ttttctctttggttatctagctgtatga 43
>25690_xtr-mir-9-3:mirbase
Length = 76
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 24 tctttggttatctagctgtatgagtgta 51
||||||||||||||||||||||||||||
Sbjct: 8 tctttggttatctagctgtatgagtgta 35
>25692_xtr-mir-9a-2:mirbase
Length = 85
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 24 tctttggttatctagctgtatgagtgta 51
||||||||||||||||||||||||||||
Sbjct: 15 tctttggttatctagctgtatgagtgta 42
>26619_cfa-mir-9-2:mirbase
Length = 60
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 24 tctttggttatctagctgtatgagtgta 51
||||||||||||||||||||||||||||
Sbjct: 1 tctttggttatctagctgtatgagtgta 28
>26942_eca-mir-9a-2:mirbase
Length = 78
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 24 tctttggttatctagctgtatgagtgta 51
||||||||||||||||||||||||||||
Sbjct: 10 tctttggttatctagctgtatgagtgta 37
>27330_mdo-mir-9-2:mirbase
Length = 87
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 24 tctttggttatctagctgtatgagtgta 51
||||||||||||||||||||||||||||
Sbjct: 16 tctttggttatctagctgtatgagtgta 43
>27476_age-mir-9:mirbase
Length = 87
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 24 tctttggttatctagctgtatgagtgta 51
||||||||||||||||||||||||||||
Sbjct: 16 tctttggttatctagctgtatgagtgta 43
>27538_lla-mir-9:mirbase
Length = 87
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 24 tctttggttatctagctgtatgagtgta 51
||||||||||||||||||||||||||||
Sbjct: 16 tctttggttatctagctgtatgagtgta 43
>27646_mml-mir-9-2:mirbase
Length = 87
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 24 tctttggttatctagctgtatgagtgta 51
||||||||||||||||||||||||||||
Sbjct: 16 tctttggttatctagctgtatgagtgta 43
>27647_mml-mir-9-3:mirbase
Length = 90
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 22 tctctttggttatctagctgtatgagtg 49
||||||||||||||||||||||||||||
Sbjct: 14 tctctttggttatctagctgtatgagtg 41
>28168_mne-mir-9:mirbase
Length = 87
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 24 tctttggttatctagctgtatgagtgta 51
||||||||||||||||||||||||||||
Sbjct: 16 tctttggttatctagctgtatgagtgta 43
>28255_ggo-mir-9:mirbase
Length = 87
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 24 tctttggttatctagctgtatgagtgta 51
||||||||||||||||||||||||||||
Sbjct: 16 tctttggttatctagctgtatgagtgta 43
>28356_hsa-mir-9-2:mirbase
Length = 87
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 24 tctttggttatctagctgtatgagtgta 51
||||||||||||||||||||||||||||
Sbjct: 16 tctttggttatctagctgtatgagtgta 43
>28357_hsa-mir-9-3:mirbase
Length = 90
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 22 tctctttggttatctagctgtatgagtg 49
||||||||||||||||||||||||||||
Sbjct: 14 tctctttggttatctagctgtatgagtg 41
>30143_ptr-mir-9-2:mirbase
Length = 87
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 24 tctttggttatctagctgtatgagtgta 51
||||||||||||||||||||||||||||
Sbjct: 16 tctttggttatctagctgtatgagtgta 43
>30747_ppy-mir-9-2:mirbase
Length = 87
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 24 tctttggttatctagctgtatgagtgta 51
||||||||||||||||||||||||||||
Sbjct: 16 tctttggttatctagctgtatgagtgta 43
>30748_ppy-mir-9-3:mirbase
Length = 90
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 22 tctctttggttatctagctgtatgagtg 49
||||||||||||||||||||||||||||
Sbjct: 14 tctctttggttatctagctgtatgagtg 41
>31421_oan-mir-9-1:mirbase
Length = 122
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 24 tctttggttatctagctgtatgagtgta 51
||||||||||||||||||||||||||||
Sbjct: 30 tctttggttatctagctgtatgagtgta 57
>31422_oan-mir-9-2:mirbase
Length = 68
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 24 tctttggttatctagctgtatgagtgta 51
||||||||||||||||||||||||||||
Sbjct: 8 tctttggttatctagctgtatgagtgta 35
>31771_mmu-mir-9-2:mirbase
Length = 72
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 24 tctttggttatctagctgtatgagtgta 51
||||||||||||||||||||||||||||
Sbjct: 8 tctttggttatctagctgtatgagtgta 35
>31772_mmu-mir-9-3:mirbase
Length = 90
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 22 tctctttggttatctagctgtatgagtg 49
||||||||||||||||||||||||||||
Sbjct: 14 tctctttggttatctagctgtatgagtg 41
>32653_rno-mir-9-2:mirbase
Length = 87
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 24 tctttggttatctagctgtatgagtgta 51
||||||||||||||||||||||||||||
Sbjct: 16 tctttggttatctagctgtatgagtgta 43
>32654_rno-mir-9-3:mirbase
Length = 90
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 22 tctctttggttatctagctgtatgagtg 49
||||||||||||||||||||||||||||
Sbjct: 14 tctctttggttatctagctgtatgagtg 41
>33104_rno-mir-3597-2:mirbase
Length = 118
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 24 tctttggttatctagctgtatgagtgta 51
||||||||||||||||||||||||||||
Sbjct: 90 tctttggttatctagctgtatgagtgta 63
>33105_rno-mir-3597-2:mirbase
Length = 118
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 24 tctttggttatctagctgtatgagtgta 51
||||||||||||||||||||||||||||
Sbjct: 90 tctttggttatctagctgtatgagtgta 63
>33106_rno-mir-3597-3:mirbase
Length = 115
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 22 tctctttggttatctagctgtatgagtg 49
||||||||||||||||||||||||||||
Sbjct: 91 tctctttggttatctagctgtatgagtg 64
>33107_rno-mir-3597-3:mirbase
Length = 115
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 22 tctctttggttatctagctgtatgagtg 49
||||||||||||||||||||||||||||
Sbjct: 91 tctctttggttatctagctgtatgagtg 64
>33124_bta-mir-9-1:mirbase
Length = 90
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 22 tctctttggttatctagctgtatgagtg 49
||||||||||||||||||||||||||||
Sbjct: 14 tctctttggttatctagctgtatgagtg 41
>33125_bta-mir-9-2:mirbase
Length = 87
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 24 tctttggttatctagctgtatgagtgta 51
||||||||||||||||||||||||||||
Sbjct: 16 tctttggttatctagctgtatgagtgta 43
>33908_ssc-mir-9-2:mirbase
Length = 87
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 24 tctttggttatctagctgtatgagtgta 51
||||||||||||||||||||||||||||
Sbjct: 16 tctttggttatctagctgtatgagtgta 43
>25422_pma-mir-9a-1:mirbase
Length = 88
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 24 tctttggttatctagctgtatgagtgt 50
|||||||||||||||||||||||||||
Sbjct: 15 tctttggttatctagctgtatgagtgt 41
>25423_pma-mir-9a-2:mirbase
Length = 89
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 24 tctttggttatctagctgtatgagtgt 50
|||||||||||||||||||||||||||
Sbjct: 16 tctttggttatctagctgtatgagtgt 42
>25424_pma-mir-9b:mirbase
Length = 88
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 24 tctttggttatctagctgtatgagtgt 50
|||||||||||||||||||||||||||
Sbjct: 74 tctttggttatctagctgtatgagtgt 48
>25691_xtr-mir-9a-1:mirbase
Length = 88
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 24 tctttggttatctagctgtatgagtgt 50
|||||||||||||||||||||||||||
Sbjct: 15 tctttggttatctagctgtatgagtgt 41
>25888_gga-mir-9-2:mirbase
Length = 87
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 24 tctttggttatctagctgtatgagtgt 50
|||||||||||||||||||||||||||
Sbjct: 16 tctttggttatctagctgtatgagtgt 42
>26394_tgu-mir-9-1:mirbase
Length = 73
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 24 tctttggttatctagctgtatgagtgt 50
|||||||||||||||||||||||||||
Sbjct: 11 tctttggttatctagctgtatgagtgt 37
>26395_tgu-mir-9-2:mirbase
Length = 73
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 24 tctttggttatctagctgtatgagtgt 50
|||||||||||||||||||||||||||
Sbjct: 11 tctttggttatctagctgtatgagtgt 37
>34190_dre-mir-9-1:mirbase
Length = 87
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 24 tctttggttatctagctgtatgagtgt 50
|||||||||||||||||||||||||||
Sbjct: 15 tctttggttatctagctgtatgagtgt 41
>34191_dre-mir-9-2:mirbase
Length = 136
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 24 tctttggttatctagctgtatgagtgt 50
|||||||||||||||||||||||||||
Sbjct: 42 tctttggttatctagctgtatgagtgt 68
>34192_dre-mir-9-3:mirbase
Length = 101
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 22 tctctttggttatctagctgtatgagt 48
|||||||||||||||||||||||||||
Sbjct: 17 tctctttggttatctagctgtatgagt 43
>34195_dre-mir-9-6:mirbase
Length = 88
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 24 tctttggttatctagctgtatgagtgt 50
|||||||||||||||||||||||||||
Sbjct: 15 tctttggttatctagctgtatgagtgt 41
>34538_fru-mir-9-2:mirbase
Length = 72
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 24 tctttggttatctagctgtatgagtgt 50
|||||||||||||||||||||||||||
Sbjct: 8 tctttggttatctagctgtatgagtgt 34
>34539_fru-mir-9-3:mirbase
Length = 82
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 24 tctttggttatctagctgtatgagtgt 50
|||||||||||||||||||||||||||
Sbjct: 16 tctttggttatctagctgtatgagtgt 42
>34686_tni-mir-9-2:mirbase
Length = 72
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 24 tctttggttatctagctgtatgagtgt 50
|||||||||||||||||||||||||||
Sbjct: 8 tctttggttatctagctgtatgagtgt 34
>34687_tni-mir-9-3:mirbase
Length = 82
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 24 tctttggttatctagctgtatgagtgt 50
|||||||||||||||||||||||||||
Sbjct: 16 tctttggttatctagctgtatgagtgt 42
>35048_api-mir-9a:mirbase
Length = 67
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 24 tctttggttatctagctgtatgagtgt 50
|||||||||||||||||||||||||||
Sbjct: 1 tctttggttatctagctgtatgagtgt 27
>26618_cfa-mir-9-1:mirbase
Length = 62
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 24 tctttggttatctagctgtatgagtg 49
||||||||||||||||||||||||||
Sbjct: 1 tctttggttatctagctgtatgagtg 26
>26620_cfa-mir-9-3:mirbase
Length = 61
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 24 tctttggttatctagctgtatgagtg 49
||||||||||||||||||||||||||
Sbjct: 1 tctttggttatctagctgtatgagtg 26
>26941_eca-mir-9a:mirbase
Length = 79
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 24 tctttggttatctagctgtatgagtg 49
||||||||||||||||||||||||||
Sbjct: 11 tctttggttatctagctgtatgagtg 36
>27645_mml-mir-9-1:mirbase
Length = 89
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 24 tctttggttatctagctgtatgagtg 49
||||||||||||||||||||||||||
Sbjct: 16 tctttggttatctagctgtatgagtg 41
>28355_hsa-mir-9-1:mirbase
Length = 89
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 24 tctttggttatctagctgtatgagtg 49
||||||||||||||||||||||||||
Sbjct: 16 tctttggttatctagctgtatgagtg 41
>30142_ptr-mir-9-1:mirbase
Length = 88
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 24 tctttggttatctagctgtatgagtg 49
||||||||||||||||||||||||||
Sbjct: 16 tctttggttatctagctgtatgagtg 41
>30746_ppy-mir-9-1:mirbase
Length = 89
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 24 tctttggttatctagctgtatgagtg 49
||||||||||||||||||||||||||
Sbjct: 16 tctttggttatctagctgtatgagtg 41
>31770_mmu-mir-9-1:mirbase
Length = 89
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 24 tctttggttatctagctgtatgagtg 49
||||||||||||||||||||||||||
Sbjct: 16 tctttggttatctagctgtatgagtg 41
>32652_rno-mir-9-1:mirbase
Length = 89
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 24 tctttggttatctagctgtatgagtg 49
||||||||||||||||||||||||||
Sbjct: 16 tctttggttatctagctgtatgagtg 41
>33102_rno-mir-3597-1:mirbase
Length = 108
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 24 tctttggttatctagctgtatgagtg 49
||||||||||||||||||||||||||
Sbjct: 84 tctttggttatctagctgtatgagtg 59
>33103_rno-mir-3597-1:mirbase
Length = 108
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 24 tctttggttatctagctgtatgagtg 49
||||||||||||||||||||||||||
Sbjct: 84 tctttggttatctagctgtatgagtg 59
>33907_ssc-mir-9-1:mirbase
Length = 89
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 24 tctttggttatctagctgtatgagtg 49
||||||||||||||||||||||||||
Sbjct: 16 tctttggttatctagctgtatgagtg 41
>34537_fru-mir-9-1:mirbase
Length = 87
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 24 tctttggttatctagctgtatgagtg 49
||||||||||||||||||||||||||
Sbjct: 15 tctttggttatctagctgtatgagtg 40
>34540_fru-mir-9-4:mirbase
Length = 85
Score = 52.0 bits (26), Expect = 8e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 19 ttttctctttggttatctagctgtatgagt 48
|||| |||||||||||||||||||||||||
Sbjct: 9 ttttatctttggttatctagctgtatgagt 38
>34685_tni-mir-9-1:mirbase
Length = 95
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 24 tctttggttatctagctgtatgagtg 49
||||||||||||||||||||||||||
Sbjct: 19 tctttggttatctagctgtatgagtg 44
>34688_tni-mir-9-4:mirbase
Length = 85
Score = 52.0 bits (26), Expect = 8e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 19 ttttctctttggttatctagctgtatgagt 48
|||| |||||||||||||||||||||||||
Sbjct: 9 ttttatctttggttatctagctgtatgagt 38
>35345_ame-mir-9a:mirbase
Length = 87
Score = 52.0 bits (26), Expect = 8e-08
Identities = 48/54 (88%), Gaps = 1/54 (1%)
Strand = Plus / Plus
Query: 24 tctttggttatctagctgtatgagt-gtacatgacattataaagctaggttacc 76
||||||||||||||||||||||||| || ||||| ||||||||||||||||
Sbjct: 15 tctttggttatctagctgtatgagtattattcgacatcataaagctaggttacc 68
>36088_dan-mir-9a:mirbase
Length = 78
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 24 tctttggttatctagctgtatgagtg 49
||||||||||||||||||||||||||
Sbjct: 10 tctttggttatctagctgtatgagtg 35
>36166_der-mir-9a:mirbase
Length = 78
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 24 tctttggttatctagctgtatgagtg 49
||||||||||||||||||||||||||
Sbjct: 10 tctttggttatctagctgtatgagtg 35
>36254_dgr-mir-9a:mirbase
Length = 75
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 24 tctttggttatctagctgtatgagtg 49
||||||||||||||||||||||||||
Sbjct: 9 tctttggttatctagctgtatgagtg 34
>36347_dme-mir-9a:mirbase
Length = 78
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 24 tctttggttatctagctgtatgagtg 49
||||||||||||||||||||||||||
Sbjct: 10 tctttggttatctagctgtatgagtg 35
>36348_dme-mir-9a:mirbase
Length = 78
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 24 tctttggttatctagctgtatgagtg 49
||||||||||||||||||||||||||
Sbjct: 10 tctttggttatctagctgtatgagtg 35
>36764_dmo-mir-9a:mirbase
Length = 75
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 24 tctttggttatctagctgtatgagtg 49
||||||||||||||||||||||||||
Sbjct: 9 tctttggttatctagctgtatgagtg 34
>36837_dpe-mir-9a:mirbase
Length = 78
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 24 tctttggttatctagctgtatgagtg 49
||||||||||||||||||||||||||
Sbjct: 10 tctttggttatctagctgtatgagtg 35
>36913_dps-mir-9a:mirbase
Length = 78
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 24 tctttggttatctagctgtatgagtg 49
||||||||||||||||||||||||||
Sbjct: 10 tctttggttatctagctgtatgagtg 35
>37126_dse-mir-9a:mirbase
Length = 78
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 24 tctttggttatctagctgtatgagtg 49
||||||||||||||||||||||||||
Sbjct: 10 tctttggttatctagctgtatgagtg 35
>37204_dsi-mir-9a:mirbase
Length = 78
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 24 tctttggttatctagctgtatgagtg 49
||||||||||||||||||||||||||
Sbjct: 10 tctttggttatctagctgtatgagtg 35
>37340_dvi-mir-9a:mirbase
Length = 75
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 24 tctttggttatctagctgtatgagtg 49
||||||||||||||||||||||||||
Sbjct: 9 tctttggttatctagctgtatgagtg 34
>37494_dya-mir-9a-1:mirbase
Length = 78
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 24 tctttggttatctagctgtatgagtg 49
||||||||||||||||||||||||||
Sbjct: 10 tctttggttatctagctgtatgagtg 35
>37495_dya-mir-9a-2:mirbase
Length = 78
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 24 tctttggttatctagctgtatgagtg 49
||||||||||||||||||||||||||
Sbjct: 10 tctttggttatctagctgtatgagtg 35
>37562_lmi-mir-9a:mirbase
Length = 61
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 24 tctttggttatctagctgtatgagtg 49
||||||||||||||||||||||||||
Sbjct: 1 tctttggttatctagctgtatgagtg 26
>37571_ngi-mir-9a:mirbase
Length = 87
Score = 52.0 bits (26), Expect = 8e-08
Identities = 48/54 (88%), Gaps = 1/54 (1%)
Strand = Plus / Plus
Query: 24 tctttggttatctagctgtatgagtgtacatg-acattataaagctaggttacc 76
||||||||||||||||||||||||| | || |||| ||||||||||||||||
Sbjct: 15 tctttggttatctagctgtatgagtttggttgtacatcataaagctaggttacc 68
>37603_nlo-mir-9a:mirbase
Length = 87
Score = 52.0 bits (26), Expect = 8e-08
Identities = 48/54 (88%), Gaps = 1/54 (1%)
Strand = Plus / Plus
Query: 24 tctttggttatctagctgtatgagtgtacatg-acattataaagctaggttacc 76
||||||||||||||||||||||||| | || |||| ||||||||||||||||
Sbjct: 15 tctttggttatctagctgtatgagtttggttgtacatcataaagctaggttacc 68
>37636_nvi-mir-9a:mirbase
Length = 87
Score = 52.0 bits (26), Expect = 8e-08
Identities = 48/54 (88%), Gaps = 1/54 (1%)
Strand = Plus / Plus
Query: 24 tctttggttatctagctgtatgagtgtacatg-acattataaagctaggttacc 76
||||||||||||||||||||||||| | || |||| ||||||||||||||||
Sbjct: 15 tctttggttatctagctgtatgagtttggttgtacatcataaagctaggttacc 68
>38597_ppc-mir-9:mirbase
Length = 105
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 22 tctctttggttatctagctgtatga 46
|||||||||||||||||||||||||
Sbjct: 27 tctctttggttatctagctgtatga 51
>34194_dre-mir-9-5:mirbase
Length = 87
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 24 tctttggttatctagctgtatgagt 48
|||||||||||||||||||||||||
Sbjct: 16 tctttggttatctagctgtatgagt 40
>37697_tca-mir-9a:mirbase
Length = 81
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 24 tctttggttatctagctgtatgagt 48
|||||||||||||||||||||||||
Sbjct: 10 tctttggttatctagctgtatgagt 34
>37698_tca-mir-9a:mirbase
Length = 81
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 24 tctttggttatctagctgtatgagt 48
|||||||||||||||||||||||||
Sbjct: 10 tctttggttatctagctgtatgagt 34
>24646_bfl-mir-9-1:mirbase
Length = 82
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 24 tctttggttatctagctgtatgag 47
||||||||||||||||||||||||
Sbjct: 7 tctttggttatctagctgtatgag 30
>24647_bfl-mir-9-1:mirbase
Length = 82
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 24 tctttggttatctagctgtatgag 47
||||||||||||||||||||||||
Sbjct: 7 tctttggttatctagctgtatgag 30
>24648_bfl-mir-9-2:mirbase
Length = 82
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 24 tctttggttatctagctgtatgag 47
||||||||||||||||||||||||
Sbjct: 6 tctttggttatctagctgtatgag 29
>24649_bfl-mir-9-2:mirbase
Length = 82
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 24 tctttggttatctagctgtatgag 47
||||||||||||||||||||||||
Sbjct: 6 tctttggttatctagctgtatgag 29
>38099_bma-mir-9:mirbase
Length = 85
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 25 ctttggttatctagctgtatgagt 48
||||||||||||||||||||||||
Sbjct: 15 ctttggttatctagctgtatgagt 38
>38107_bma-mir-79:mirbase
Length = 85
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 25 ctttggttatctagctgtatgagt 48
||||||||||||||||||||||||
Sbjct: 15 ctttggttatctagctgtatgagt 38
>25693_xtr-mir-9b:mirbase
Length = 74
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 24 tctttggttatctagctgtatgagt 48
|||||||||| ||||||||||||||
Sbjct: 8 tctttggttacctagctgtatgagt 32
>39067_sme-mir-9a:mirbase
Length = 105
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 24 tctttggttatctagctgtatgagtgta 51
||||||||| ||||||||||||| ||||
Sbjct: 21 tctttggttttctagctgtatgattgta 48
>38938_emu-mir-9:mirbase
Length = 93
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 24 tctttggttatctagctgtatgag 47
||||||||||||||||||| ||||
Sbjct: 11 tctttggttatctagctgtgtgag 34
>38915_egr-mir-9:mirbase
Length = 93
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 24 tctttggttatctagctgtatgag 47
||||||||||||||||||| ||||
Sbjct: 11 tctttggttatctagctgtgtgag 34
>38623_ppc-mir-79:mirbase
Length = 96
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 61 ataaagctaggttaccaaag 80
||||||||||||||||||||
Sbjct: 59 ataaagctaggttaccaaag 78
>38542_crm-mir-79:mirbase
Length = 120
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 61 ataaagctaggttaccaaag 80
||||||||||||||||||||
Sbjct: 71 ataaagctaggttaccaaag 90
>38190_cbr-mir-79:mirbase
Length = 93
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 61 ataaagctaggttaccaaag 80
||||||||||||||||||||
Sbjct: 57 ataaagctaggttaccaaag 76
>38316_cel-mir-79:mirbase
Length = 98
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 61 ataaagctaggttaccaaag 80
||||||||||||||||||||
Sbjct: 61 ataaagctaggttaccaaag 80
