miRNEST 2.0, an integrative microRNA resource :: BLAST
>40466_gma-MIR319c:mirbase
Length = 221
Score = 422 bits (213), Expect = e-119
Identities = 219/221 (99%)
Strand = Plus / Plus
Query: 11 ttgggagggaaagagagtgaaggagcttccctcagcccattcatggagataacgaaagat 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttgggagggaaagagagtgaaggagcttccctcagcccattcatggagataacgaaagat 60
Query: 71 tgggttgctgaattaactgctagctcacacattcattcatacaatagtattcaattaggg 130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgggttgctgaattaactgctagctcacacattcattcatacaatagtattcaattaggg 120
Query: 131 taatattgtgtgaatgaagcgggagtatatagtatctatattggaaccctctttctctgt 190
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 121 taatattgtgtgaatgaagcgggagtatatagtatctatattgcaaccctctttctctgt 180
Query: 191 gcttggactgaagggagctccttctttttctgctccctcca 231
|||||||||||| ||||||||||||||||||||||||||||
Sbjct: 181 gcttggactgaaaggagctccttctttttctgctccctcca 221
>41026_pvu-MIR319c:mirbase
Length = 734
Score = 101 bits (51), Expect = 2e-22
Identities = 54/55 (98%)
Strand = Plus / Plus
Query: 3 tagtcacattgggagggaaagagagtgaaggagcttccctcagcccattcatgga 57
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 tagtcacattgggaaggaaagagagtgaaggagcttccctcagcccattcatgga 271
Score = 79.8 bits (40), Expect = 9e-16
Identities = 58/63 (92%), Gaps = 2/63 (3%)
Strand = Plus / Plus
Query: 176 accctctttctctgtgcttggactgaagggagctccttctttttctgctccctccatttg 235
|||||||||||||| |||||||||||||||||||||||| |||||| | ||||||||||
Sbjct: 393 accctctttctctgagcttggactgaagggagctccttc--tttctgttgcctccatttg 450
Query: 236 tat 238
|||
Sbjct: 451 tat 453
>41409_ptc-MIR319f:mirbase
Length = 202
Score = 67.9 bits (34), Expect = 3e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 177 ccctctttctctgtgcttggactgaagggagctccttc 214
|||||||| |||||||||||||||||||||||||||||
Sbjct: 158 ccctctttttctgtgcttggactgaagggagctccttc 195
>40071_ath-MIR319c:mirbase
Length = 199
Score = 67.9 bits (34), Expect = 3e-12
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 180 tctttctctgtgcttggactgaagggagctccttctttttct 221
||||| |||||| |||||||||||||||||||||||||||||
Sbjct: 157 tctttatctgtgtttggactgaagggagctccttctttttct 198
>39861_aly-MIR319d:mirbase
Length = 267
Score = 67.9 bits (34), Expect = 3e-12
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 180 tctttctctgtgcttggactgaagggagctccttctttttct 221
||||| |||||| |||||||||||||||||||||||||||||
Sbjct: 191 tctttatctgtgtttggactgaagggagctccttctttttct 232
>39860_aly-MIR319c:mirbase
Length = 271
Score = 67.9 bits (34), Expect = 3e-12
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 180 tctttctctgtgcttggactgaagggagctccttctttttct 221
||||| |||||| |||||||||||||||||||||||||||||
Sbjct: 191 tctttatctgtgtttggactgaagggagctccttctttttct 232
>41410_ptc-MIR319g:mirbase
Length = 204
Score = 58.0 bits (29), Expect = 3e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 186 tctgtgcttggactgaagggagctccttc 214
|||||||||||||||||||||||||||||
Sbjct: 169 tctgtgcttggactgaagggagctccttc 197
>41407_ptc-MIR319d:mirbase
Length = 193
Score = 58.0 bits (29), Expect = 3e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 183 ttctctgtgcttggactgaagggagctcc 211
|||||||||||||||||||||||||||||
Sbjct: 155 ttctctgtgcttggactgaagggagctcc 183
>41406_ptc-MIR319c:mirbase
Length = 196
Score = 58.0 bits (29), Expect = 3e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 183 ttctctgtgcttggactgaagggagctcc 211
|||||||||||||||||||||||||||||
Sbjct: 158 ttctctgtgcttggactgaagggagctcc 186
>40369_rco-MIR319c:mirbase
Length = 188
Score = 58.0 bits (29), Expect = 3e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 183 ttctctgtgcttggactgaagggagctcc 211
|||||||||||||||||||||||||||||
Sbjct: 153 ttctctgtgcttggactgaagggagctcc 181
>41638_vvi-MIR319f:mirbase
Length = 193
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 186 tctgtgcttggactgaagggagctcc 211
||||||||||||||||||||||||||
Sbjct: 155 tctgtgcttggactgaagggagctcc 180
>41636_vvi-MIR319c:mirbase
Length = 182
Score = 50.1 bits (25), Expect = 8e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 187 ctgtgcttggactgaagggagctcc 211
|||||||||||||||||||||||||
Sbjct: 145 ctgtgcttggactgaagggagctcc 169
>41282_ctr-MIR319:mirbase
Length = 186
Score = 50.1 bits (25), Expect = 8e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 187 ctgtgcttggactgaagggagctcc 211
|||||||||||||||||||||||||
Sbjct: 151 ctgtgcttggactgaagggagctcc 175
>40370_rco-MIR319d:mirbase
Length = 187
Score = 50.1 bits (25), Expect = 8e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 193 ttggactgaagggagctccttcttt 217
|||||||||||||||||||||||||
Sbjct: 162 ttggactgaagggagctccttcttt 186
>40070_ath-MIR319b:mirbase
Length = 172
Score = 50.1 bits (25), Expect = 8e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 183 ttctctgtgcttggactgaagggagctcc 211
|||||| ||||||||||||||||||||||
Sbjct: 142 ttctctatgcttggactgaagggagctcc 170
>39859_aly-MIR319b:mirbase
Length = 246
Score = 50.1 bits (25), Expect = 8e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 183 ttctctgtgcttggactgaagggagctcc 211
|||||| ||||||||||||||||||||||
Sbjct: 181 ttctctatgcttggactgaagggagctcc 209
>42642_tae-MIR319:mirbase
Length = 211
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 190 tgcttggactgaagggagctcc 211
||||||||||||||||||||||
Sbjct: 181 tgcttggactgaagggagctcc 202
>41770_bdi-MIR319:mirbase
Length = 280
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 190 tgcttggactgaagggagctcc 211
||||||||||||||||||||||
Sbjct: 223 tgcttggactgaagggagctcc 244
>40703_mtr-MIR319:mirbase
Length = 207
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 190 tgcttggactgaagggagctcc 211
||||||||||||||||||||||
Sbjct: 166 tgcttggactgaagggagctcc 187
>41544_sly-MIR319:mirbase
Length = 168
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 187 ctgtgcttggactgaagggagctcc 211
|||| ||||||||||||||||||||
Sbjct: 144 ctgtacttggactgaagggagctcc 168
>41404_ptc-MIR319a:mirbase
Length = 188
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 187 ctgtgcttggactgaagggagctcc 211
|||| ||||||||||||||||||||
Sbjct: 154 ctgtacttggactgaagggagctcc 178
>40465_gma-MIR319b:mirbase
Length = 208
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 187 ctgtgcttggactgaagggagctcc 211
|||| ||||||||||||||||||||
Sbjct: 164 ctgtacttggactgaagggagctcc 188
>40464_gma-MIR319a:mirbase
Length = 207
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 187 ctgtgcttggactgaagggagctcc 211
|||| ||||||||||||||||||||
Sbjct: 163 ctgtacttggactgaagggagctcc 187
>40367_rco-MIR319a:mirbase
Length = 211
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 187 ctgtgcttggactgaagggagctcc 211
|||| ||||||||||||||||||||
Sbjct: 180 ctgtacttggactgaagggagctcc 204
>40069_ath-MIR319a:mirbase
Length = 176
Score = 42.1 bits (21), Expect = 2e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 183 ttctctgtgcttggactgaagggagctcc 211
|||||| || |||||||||||||||||||
Sbjct: 144 ttctctttgattggactgaagggagctcc 172
>39858_aly-MIR319a:mirbase
Length = 221
Score = 42.1 bits (21), Expect = 2e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 183 ttctctgtgcttggactgaagggagctcc 211
|||||| || |||||||||||||||||||
Sbjct: 167 ttctctttgattggactgaagggagctcc 195
>39481_ppt-MIR319b:mirbase
Length = 160
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 192 cttggactgaagggagctcct 212
|||||||||||||||||||||
Sbjct: 140 cttggactgaagggagctcct 160
>42693_zma-MIR159d:mirbase
Length = 217
Score = 40.1 bits (20), Expect = 8e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 189 gtgcttggactgaagggagctcct 212
||||||||| ||||||||||||||
Sbjct: 175 gtgcttggattgaagggagctcct 198
>42692_zma-MIR159c:mirbase
Length = 217
Score = 40.1 bits (20), Expect = 8e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 189 gtgcttggactgaagggagctcct 212
||||||||| ||||||||||||||
Sbjct: 175 gtgcttggattgaagggagctcct 198
>42495_sbi-MIR159b:mirbase
Length = 253
Score = 40.1 bits (20), Expect = 8e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 189 gtgcttggactgaagggagctcct 212
||||||||| ||||||||||||||
Sbjct: 211 gtgcttggattgaagggagctcct 234
>42454_sof-MIR159c:mirbase
Length = 238
Score = 40.1 bits (20), Expect = 8e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 189 gtgcttggactgaagggagctcct 212
||||||||| ||||||||||||||
Sbjct: 196 gtgcttggattgaagggagctcct 219
>41637_vvi-MIR319e:mirbase
Length = 107
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 193 ttggactgaagggagctcct 212
||||||||||||||||||||
Sbjct: 77 ttggactgaagggagctcct 96
>41635_vvi-MIR319b:mirbase
Length = 194
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 192 cttggactgaagggagctcc 211
||||||||||||||||||||
Sbjct: 162 cttggactgaagggagctcc 181
>41411_ptc-MIR319h:mirbase
Length = 195
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 193 ttggactgaagggagctcct 212
||||||||||||||||||||
Sbjct: 165 ttggactgaagggagctcct 184
>41408_ptc-MIR319e:mirbase
Length = 192
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 193 ttggactgaagggagctcct 212
||||||||||||||||||||
Sbjct: 164 ttggactgaagggagctcct 183
>41236_csi-MIR319:mirbase
Length = 123
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 193 ttggactgaagggagctcct 212
||||||||||||||||||||
Sbjct: 91 ttggactgaagggagctcct 110
>41185_aqc-MIR319:mirbase
Length = 177
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 192 cttggactgaagggagctcc 211
||||||||||||||||||||
Sbjct: 154 cttggactgaagggagctcc 173
>41129_tcc-MIR319:mirbase
Length = 133
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 193 ttggactgaagggagctcct 212
||||||||||||||||||||
Sbjct: 94 ttggactgaagggagctcct 113
>40704_mtr-MIR319b:mirbase
Length = 180
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 192 cttggactgaagggagctcc 211
||||||||||||||||||||
Sbjct: 155 cttggactgaagggagctcc 174
>40368_rco-MIR319b:mirbase
Length = 179
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 192 cttggactgaagggagctcc 211
||||||||||||||||||||
Sbjct: 153 cttggactgaagggagctcc 172
>39740_smo-MIR319:mirbase
Length = 215
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 192 cttggactgaagggagctcc 211
||||||||||||||||||||
Sbjct: 185 cttggactgaagggagctcc 204
>39484_ppt-MIR319e:mirbase
Length = 174
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 192 cttggactgaagggagctcc 211
||||||||||||||||||||
Sbjct: 147 cttggactgaagggagctcc 166
>39483_ppt-MIR319d:mirbase
Length = 170
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 192 cttggactgaagggagctcc 211
||||||||||||||||||||
Sbjct: 145 cttggactgaagggagctcc 164
>39482_ppt-MIR319c:mirbase
Length = 189
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 192 cttggactgaagggagctcc 211
||||||||||||||||||||
Sbjct: 154 cttggactgaagggagctcc 173
>39480_ppt-MIR319a:mirbase
Length = 169
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 192 cttggactgaagggagctcc 211
||||||||||||||||||||
Sbjct: 148 cttggactgaagggagctcc 167
