miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>46260_miR159:micropc
Length = 166
Score = 329 bits (166), Expect = 4e-91
Identities = 166/166 (100%)
Strand = Plus / Plus
Query: 11 tggagctctctgcactccagtgttgaaggaggtgatggtaaaccctagctgctaattcat 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tggagctctctgcactccagtgttgaaggaggtgatggtaaaccctagctgctaattcat 60
Query: 71 ggttacctttggcttcccataaggaagcatgtgaaagtcatgggtttacatgaatatgga 130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggttacctttggcttcccataaggaagcatgtgaaagtcatgggtttacatgaatatgga 120
Query: 131 gacggggttgccttgatcttttggtattggagtgaagggagctccg 176
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gacggggttgccttgatcttttggtattggagtgaagggagctccg 166
>46567_miR319:micropc
Length = 164
Score = 325 bits (164), Expect = 7e-90
Identities = 164/164 (100%)
Strand = Plus / Plus
Query: 12 ggagctctctgcactccagtgttgaaggaggtgatggtaaaccctagctgctaattcatg 71
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggagctctctgcactccagtgttgaaggaggtgatggtaaaccctagctgctaattcatg 60
Query: 72 gttacctttggcttcccataaggaagcatgtgaaagtcatgggtttacatgaatatggag 131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gttacctttggcttcccataaggaagcatgtgaaagtcatgggtttacatgaatatggag 120
Query: 132 acggggttgccttgatcttttggtattggagtgaagggagctcc 175
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 acggggttgccttgatcttttggtattggagtgaagggagctcc 164
>46003_miR319:micropc
Length = 164
Score = 325 bits (164), Expect = 7e-90
Identities = 164/164 (100%)
Strand = Plus / Plus
Query: 12 ggagctctctgcactccagtgttgaaggaggtgatggtaaaccctagctgctaattcatg 71
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggagctctctgcactccagtgttgaaggaggtgatggtaaaccctagctgctaattcatg 60
Query: 72 gttacctttggcttcccataaggaagcatgtgaaagtcatgggtttacatgaatatggag 131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gttacctttggcttcccataaggaagcatgtgaaagtcatgggtttacatgaatatggag 120
Query: 132 acggggttgccttgatcttttggtattggagtgaagggagctcc 175
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 acggggttgccttgatcttttggtattggagtgaagggagctcc 164
>45716_miR319:micropc
Length = 164
Score = 325 bits (164), Expect = 7e-90
Identities = 164/164 (100%)
Strand = Plus / Plus
Query: 12 ggagctctctgcactccagtgttgaaggaggtgatggtaaaccctagctgctaattcatg 71
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggagctctctgcactccagtgttgaaggaggtgatggtaaaccctagctgctaattcatg 60
Query: 72 gttacctttggcttcccataaggaagcatgtgaaagtcatgggtttacatgaatatggag 131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gttacctttggcttcccataaggaagcatgtgaaagtcatgggtttacatgaatatggag 120
Query: 132 acggggttgccttgatcttttggtattggagtgaagggagctcc 175
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 acggggttgccttgatcttttggtattggagtgaagggagctcc 164
>45689_miR319:micropc
Length = 164
Score = 325 bits (164), Expect = 7e-90
Identities = 164/164 (100%)
Strand = Plus / Plus
Query: 12 ggagctctctgcactccagtgttgaaggaggtgatggtaaaccctagctgctaattcatg 71
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggagctctctgcactccagtgttgaaggaggtgatggtaaaccctagctgctaattcatg 60
Query: 72 gttacctttggcttcccataaggaagcatgtgaaagtcatgggtttacatgaatatggag 131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gttacctttggcttcccataaggaagcatgtgaaagtcatgggtttacatgaatatggag 120
Query: 132 acggggttgccttgatcttttggtattggagtgaagggagctcc 175
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 acggggttgccttgatcttttggtattggagtgaagggagctcc 164
>46555_miR159:micropc
Length = 162
Score = 321 bits (162), Expect = 1e-88
Identities = 162/162 (100%)
Strand = Plus / Plus
Query: 13 gagctctctgcactccagtgttgaaggaggtgatggtaaaccctagctgctaattcatgg 72
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gagctctctgcactccagtgttgaaggaggtgatggtaaaccctagctgctaattcatgg 60
Query: 73 ttacctttggcttcccataaggaagcatgtgaaagtcatgggtttacatgaatatggaga 132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttacctttggcttcccataaggaagcatgtgaaagtcatgggtttacatgaatatggaga 120
Query: 133 cggggttgccttgatcttttggtattggagtgaagggagctc 174
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cggggttgccttgatcttttggtattggagtgaagggagctc 162
>45552_miR159:micropc
Length = 162
Score = 321 bits (162), Expect = 1e-88
Identities = 162/162 (100%)
Strand = Plus / Plus
Query: 13 gagctctctgcactccagtgttgaaggaggtgatggtaaaccctagctgctaattcatgg 72
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gagctctctgcactccagtgttgaaggaggtgatggtaaaccctagctgctaattcatgg 60
Query: 73 ttacctttggcttcccataaggaagcatgtgaaagtcatgggtttacatgaatatggaga 132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttacctttggcttcccataaggaagcatgtgaaagtcatgggtttacatgaatatggaga 120
Query: 133 cggggttgccttgatcttttggtattggagtgaagggagctc 174
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cggggttgccttgatcttttggtattggagtgaagggagctc 162
>46816_miR159:micropc
Length = 166
Score = 69.9 bits (35), Expect = 6e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 141 ccttgatcttttggtattggagtgaagggagctcc 175
|||||||||||||||||||||||||||||||||||
Sbjct: 131 ccttgatcttttggtattggagtgaagggagctcc 165
>46067_miR159:micropc
Length = 166
Score = 69.9 bits (35), Expect = 6e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 141 ccttgatcttttggtattggagtgaagggagctcc 175
|||||||||||||||||||||||||||||||||||
Sbjct: 131 ccttgatcttttggtattggagtgaagggagctcc 165
>46479_miR159:micropc
Length = 162
Score = 67.9 bits (34), Expect = 3e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 141 ccttgatcttttggtattggagtgaagggagctc 174
||||||||||||||||||||||||||||||||||
Sbjct: 129 ccttgatcttttggtattggagtgaagggagctc 162
>45759_miR159:micropc
Length = 162
Score = 67.9 bits (34), Expect = 3e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 141 ccttgatcttttggtattggagtgaagggagctc 174
||||||||||||||||||||||||||||||||||
Sbjct: 129 ccttgatcttttggtattggagtgaagggagctc 162
>46773_miR159:micropc
Length = 172
Score = 40.1 bits (20), Expect = 6e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 148 cttttggtattggagtgaagggagctcc 175
||||||| ||||| ||||||||||||||
Sbjct: 145 cttttgggattggggtgaagggagctcc 172
>46547_miR319:micropc
Length = 172
Score = 40.1 bits (20), Expect = 6e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 148 cttttggtattggagtgaagggagctcc 175
||||||| ||||| ||||||||||||||
Sbjct: 145 cttttgggattggggtgaagggagctcc 172
>45950_miR159:micropc
Length = 173
Score = 40.1 bits (20), Expect = 6e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 148 cttttggtattggagtgaagggagctcc 175
||||||| ||||| ||||||||||||||
Sbjct: 145 cttttgggattggggtgaagggagctcc 172
