miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>35050_api-mir-10:mirbase
Length = 83
Score = 81.8 bits (41), Expect = 6e-17
Identities = 66/73 (90%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 1 ctacatctaccctgtagatccgaatttgtctgcaacaagactacaaattcggttctagag 60
||||||||||||||||||||||||||||| || || | | | ||||||||||||||||||
Sbjct: 6 ctacatctaccctgtagatccgaatttgtttgaaaaacggcgacaaattcggttctagag 65
Query: 61 aggctttgtgtgg 73
||| |||||||||
Sbjct: 66 agg-tttgtgtgg 77
>37705_tca-mir-10:mirbase
Length = 71
Score = 77.8 bits (39), Expect = 9e-16
Identities = 57/63 (90%)
Strand = Plus / Plus
Query: 1 ctacatctaccctgtagatccgaatttgtctgcaacaagactacaaattcggttctagag 60
||||||||||||||||||||||||||||| || || || | ||||||||||||||||||
Sbjct: 3 ctacatctaccctgtagatccgaatttgtttgaaatcaggcgacaaattcggttctagag 62
Query: 61 agg 63
|||
Sbjct: 63 agg 65
>37706_tca-mir-10:mirbase
Length = 71
Score = 77.8 bits (39), Expect = 9e-16
Identities = 57/63 (90%)
Strand = Plus / Plus
Query: 1 ctacatctaccctgtagatccgaatttgtctgcaacaagactacaaattcggttctagag 60
||||||||||||||||||||||||||||| || || || | ||||||||||||||||||
Sbjct: 3 ctacatctaccctgtagatccgaatttgtttgaaatcaggcgacaaattcggttctagag 62
Query: 61 agg 63
|||
Sbjct: 63 agg 65
>35348_ame-mir-10-1:mirbase
Length = 100
Score = 73.8 bits (37), Expect = 1e-14
Identities = 65/73 (89%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 1 ctacatctaccctgtagatccgaatttgtctgcaacaagactacaaattcggttctagag 60
||||||||||||||||||||||||||||| || | || | ||||||||||||||||||
Sbjct: 14 ctacatctaccctgtagatccgaatttgtttgataagaggcgacaaattcggttctagag 73
Query: 61 aggctttgtgtgg 73
||| |||||||||
Sbjct: 74 agg-tttgtgtgg 85
>35349_ame-mir-10-2:mirbase
Length = 100
Score = 73.8 bits (37), Expect = 1e-14
Identities = 65/73 (89%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 1 ctacatctaccctgtagatccgaatttgtctgcaacaagactacaaattcggttctagag 60
||||||||||||||||||||||||||||| || | || | ||||||||||||||||||
Sbjct: 14 ctacatctaccctgtagatccgaatttgtttgataagaggcgacaaattcggttctagag 73
Query: 61 aggctttgtgtgg 73
||| |||||||||
Sbjct: 74 agg-tttgtgtgg 85
>35523_bmo-mir-10:mirbase
Length = 84
Score = 73.8 bits (37), Expect = 1e-14
Identities = 65/73 (89%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 1 ctacatctaccctgtagatccgaatttgtctgcaacaagactacaaattcggttctagag 60
||||||||||||||||||||||||||||| || | || | ||||||||||||||||||
Sbjct: 7 ctacatctaccctgtagatccgaatttgtttgaagtgaggcgacaaattcggttctagag 66
Query: 61 aggctttgtgtgg 73
||| |||||||||
Sbjct: 67 agg-tttgtgtgg 78
>37604_nlo-mir-10:mirbase
Length = 100
Score = 73.8 bits (37), Expect = 1e-14
Identities = 65/73 (89%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 1 ctacatctaccctgtagatccgaatttgtctgcaacaagactacaaattcggttctagag 60
||||||||||||||||||||||||||||| || | || | ||||||||||||||||||
Sbjct: 14 ctacatctaccctgtagatccgaatttgtttgaagtcaggcgacaaattcggttctagag 73
Query: 61 aggctttgtgtgg 73
||| |||||||||
Sbjct: 74 agg-tttgtgtgg 85
>37637_nvi-mir-10:mirbase
Length = 100
Score = 73.8 bits (37), Expect = 1e-14
Identities = 65/73 (89%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 1 ctacatctaccctgtagatccgaatttgtctgcaacaagactacaaattcggttctagag 60
||||||||||||||||||||||||||||| || | || | ||||||||||||||||||
Sbjct: 14 ctacatctaccctgtagatccgaatttgtttgaagtcaggcgacaaattcggttctagag 73
Query: 61 aggctttgtgtgg 73
||| |||||||||
Sbjct: 74 agg-tttgtgtgg 85
>36008_cqu-mir-10:mirbase
Length = 86
Score = 60.0 bits (30), Expect = 2e-10
Identities = 68/78 (87%), Gaps = 7/78 (8%)
Strand = Plus / Plus
Query: 1 ctacatctaccctgtagatccgaatttgtctg-----caacaagactacaaattcggttc 55
||||||||||||||||||||||||||||| || |||||| | |||||||||||||
Sbjct: 5 ctacatctaccctgtagatccgaatttgtttgaatataaacaag-cgacaaattcggttc 63
Query: 56 tagagaggctttgtgtgg 73
|||||||| |||||||||
Sbjct: 64 tagagagg-tttgtgtgg 80
>35001_dpu-mir-10:mirbase
Length = 101
Score = 58.0 bits (29), Expect = 9e-10
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 1 ctacatctaccctgtagatccgaatttgt 29
|||||||||||||||||||||||||||||
Sbjct: 13 ctacatctaccctgtagatccgaatttgt 41
>35177_aae-mir-10:mirbase
Length = 89
Score = 58.0 bits (29), Expect = 9e-10
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 1 ctacatctaccctgtagatccgaatttgt 29
|||||||||||||||||||||||||||||
Sbjct: 7 ctacatctaccctgtagatccgaatttgt 35
>35278_aga-mir-10:mirbase
Length = 102
Score = 50.1 bits (25), Expect = 2e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 1 ctacatctaccctgtagatccgaatttgt 29
||||||| |||||||||||||||||||||
Sbjct: 14 ctacatccaccctgtagatccgaatttgt 42
Score = 46.1 bits (23), Expect = 3e-06
Identities = 30/31 (96%), Gaps = 1/31 (3%)
Strand = Plus / Plus
Query: 43 acaaattcggttctagagaggctttgtgtgg 73
||||||||||||||||||||| |||||||||
Sbjct: 60 acaaattcggttctagagagg-tttgtgtgg 89
>36169_der-mir-10:mirbase
Length = 77
Score = 50.1 bits (25), Expect = 2e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 1 ctacatctaccctgtagatccgaatttgt 29
|||| ||||||||||||||||||||||||
Sbjct: 1 ctacgtctaccctgtagatccgaatttgt 29
Score = 46.1 bits (23), Expect = 3e-06
Identities = 30/31 (96%), Gaps = 1/31 (3%)
Strand = Plus / Plus
Query: 43 acaaattcggttctagagaggctttgtgtgg 73
||||||||||||||||||||| |||||||||
Sbjct: 48 acaaattcggttctagagagg-tttgtgtgg 77
>37420_dwi-mir-10:mirbase
Length = 78
Score = 50.1 bits (25), Expect = 2e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 1 ctacatctaccctgtagatccgaatttgt 29
|||| ||||||||||||||||||||||||
Sbjct: 1 ctacgtctaccctgtagatccgaatttgt 29
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 43 acaaattcggttctagagagg 63
|||||||||||||||||||||
Sbjct: 49 acaaattcggttctagagagg 69
>34809_spu-mir-10:mirbase
Length = 110
Score = 48.1 bits (24), Expect = 8e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 2 tacatctaccctgtagatccgaatttgt 29
|||||| |||||||||||||||||||||
Sbjct: 20 tacatcaaccctgtagatccgaatttgt 47
>34866_sko-mir-10:mirbase
Length = 101
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 6 tctaccctgtagatccgaatttgt 29
||||||||||||||||||||||||
Sbjct: 18 tctaccctgtagatccgaatttgt 41
>36091_dan-mir-10:mirbase
Length = 77
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 6 tctaccctgtagatccgaatttgt 29
||||||||||||||||||||||||
Sbjct: 6 tctaccctgtagatccgaatttgt 29
Score = 46.1 bits (23), Expect = 3e-06
Identities = 30/31 (96%), Gaps = 1/31 (3%)
Strand = Plus / Plus
Query: 43 acaaattcggttctagagaggctttgtgtgg 73
||||||||||||||||||||| |||||||||
Sbjct: 48 acaaattcggttctagagagg-tttgtgtgg 77
>36257_dgr-mir-10:mirbase
Length = 77
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 6 tctaccctgtagatccgaatttgt 29
||||||||||||||||||||||||
Sbjct: 6 tctaccctgtagatccgaatttgt 29
Score = 46.1 bits (23), Expect = 3e-06
Identities = 30/31 (96%), Gaps = 1/31 (3%)
Strand = Plus / Plus
Query: 43 acaaattcggttctagagaggctttgtgtgg 73
||||||||||||||||||||| |||||||||
Sbjct: 48 acaaattcggttctagagagg-tttgtgtgg 77
>36353_dme-mir-10:mirbase
Length = 77
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 6 tctaccctgtagatccgaatttgt 29
||||||||||||||||||||||||
Sbjct: 6 tctaccctgtagatccgaatttgt 29
Score = 46.1 bits (23), Expect = 3e-06
Identities = 30/31 (96%), Gaps = 1/31 (3%)
Strand = Plus / Plus
Query: 43 acaaattcggttctagagaggctttgtgtgg 73
||||||||||||||||||||| |||||||||
Sbjct: 48 acaaattcggttctagagagg-tttgtgtgg 77
>36354_dme-mir-10:mirbase
Length = 77
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 6 tctaccctgtagatccgaatttgt 29
||||||||||||||||||||||||
Sbjct: 6 tctaccctgtagatccgaatttgt 29
Score = 46.1 bits (23), Expect = 3e-06
Identities = 30/31 (96%), Gaps = 1/31 (3%)
Strand = Plus / Plus
Query: 43 acaaattcggttctagagaggctttgtgtgg 73
||||||||||||||||||||| |||||||||
Sbjct: 48 acaaattcggttctagagagg-tttgtgtgg 77
>36767_dmo-mir-10:mirbase
Length = 77
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 6 tctaccctgtagatccgaatttgt 29
||||||||||||||||||||||||
Sbjct: 6 tctaccctgtagatccgaatttgt 29
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 43 acaaattcggttctagagagg 63
|||||||||||||||||||||
Sbjct: 48 acaaattcggttctagagagg 68
>36840_dpe-mir-10:mirbase
Length = 77
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 6 tctaccctgtagatccgaatttgt 29
||||||||||||||||||||||||
Sbjct: 6 tctaccctgtagatccgaatttgt 29
Score = 46.1 bits (23), Expect = 3e-06
Identities = 30/31 (96%), Gaps = 1/31 (3%)
Strand = Plus / Plus
Query: 43 acaaattcggttctagagaggctttgtgtgg 73
||||||||||||||||||||| |||||||||
Sbjct: 48 acaaattcggttctagagagg-tttgtgtgg 77
>36916_dps-mir-10:mirbase
Length = 77
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 6 tctaccctgtagatccgaatttgt 29
||||||||||||||||||||||||
Sbjct: 6 tctaccctgtagatccgaatttgt 29
Score = 46.1 bits (23), Expect = 3e-06
Identities = 30/31 (96%), Gaps = 1/31 (3%)
Strand = Plus / Plus
Query: 43 acaaattcggttctagagaggctttgtgtgg 73
||||||||||||||||||||| |||||||||
Sbjct: 48 acaaattcggttctagagagg-tttgtgtgg 77
>37129_dse-mir-10:mirbase
Length = 77
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 6 tctaccctgtagatccgaatttgt 29
||||||||||||||||||||||||
Sbjct: 6 tctaccctgtagatccgaatttgt 29
Score = 46.1 bits (23), Expect = 3e-06
Identities = 30/31 (96%), Gaps = 1/31 (3%)
Strand = Plus / Plus
Query: 43 acaaattcggttctagagaggctttgtgtgg 73
||||||||||||||||||||| |||||||||
Sbjct: 48 acaaattcggttctagagagg-tttgtgtgg 77
>37205_dsi-mir-10:mirbase
Length = 77
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 6 tctaccctgtagatccgaatttgt 29
||||||||||||||||||||||||
Sbjct: 6 tctaccctgtagatccgaatttgt 29
Score = 46.1 bits (23), Expect = 3e-06
Identities = 30/31 (96%), Gaps = 1/31 (3%)
Strand = Plus / Plus
Query: 43 acaaattcggttctagagaggctttgtgtgg 73
||||||||||||||||||||| |||||||||
Sbjct: 48 acaaattcggttctagagagg-tttgtgtgg 77
>37498_dya-mir-10:mirbase
Length = 77
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 6 tctaccctgtagatccgaatttgt 29
||||||||||||||||||||||||
Sbjct: 6 tctaccctgtagatccgaatttgt 29
Score = 46.1 bits (23), Expect = 3e-06
Identities = 30/31 (96%), Gaps = 1/31 (3%)
Strand = Plus / Plus
Query: 43 acaaattcggttctagagaggctttgtgtgg 73
||||||||||||||||||||| |||||||||
Sbjct: 48 acaaattcggttctagagagg-tttgtgtgg 77
>37563_lmi-mir-10:mirbase
Length = 59
Score = 48.1 bits (24), Expect = 8e-07
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 8 taccctgtagatccgaatttgtctgcaacaagactacaaattcggttctagagagg 63
|||||||||||||||||||||| || | | | |||||||||||||||||||||
Sbjct: 1 taccctgtagatccgaatttgtttgacatagtgcgacaaattcggttctagagagg 56
>38853_lgi-mir-10:mirbase
Length = 101
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 8 taccctgtagatccgaatttgt 29
||||||||||||||||||||||
Sbjct: 21 taccctgtagatccgaatttgt 42
>24650_bfl-mir-10a:mirbase
Length = 76
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 8 taccctgtagatccgaatttgt 29
||||||||||||||||||||||
Sbjct: 8 taccctgtagatccgaatttgt 29
>25694_xtr-mir-10a:mirbase
Length = 100
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 8 taccctgtagatccgaatttgt 29
||||||||||||||||||||||
Sbjct: 22 taccctgtagatccgaatttgt 43
>25889_gga-mir-10a:mirbase
Length = 74
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 8 taccctgtagatccgaatttgt 29
||||||||||||||||||||||
Sbjct: 8 taccctgtagatccgaatttgt 29
>26621_cfa-mir-10:mirbase
Length = 63
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 8 taccctgtagatccgaatttgt 29
||||||||||||||||||||||
Sbjct: 1 taccctgtagatccgaatttgt 22
>26943_eca-mir-10a:mirbase
Length = 110
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 8 taccctgtagatccgaatttgt 29
||||||||||||||||||||||
Sbjct: 22 taccctgtagatccgaatttgt 43
>27331_mdo-mir-10a:mirbase
Length = 90
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 8 taccctgtagatccgaatttgt 29
||||||||||||||||||||||
Sbjct: 15 taccctgtagatccgaatttgt 36
>27477_age-mir-10a:mirbase
Length = 110
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 8 taccctgtagatccgaatttgt 29
||||||||||||||||||||||
Sbjct: 22 taccctgtagatccgaatttgt 43
>27587_sla-mir-10a:mirbase
Length = 110
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 8 taccctgtagatccgaatttgt 29
||||||||||||||||||||||
Sbjct: 22 taccctgtagatccgaatttgt 43
>27648_mml-mir-10a:mirbase
Length = 109
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 8 taccctgtagatccgaatttgt 29
||||||||||||||||||||||
Sbjct: 22 taccctgtagatccgaatttgt 43
>28256_ggo-mir-10a:mirbase
Length = 110
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 8 taccctgtagatccgaatttgt 29
||||||||||||||||||||||
Sbjct: 22 taccctgtagatccgaatttgt 43
>28358_hsa-mir-10a:mirbase
Length = 110
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 8 taccctgtagatccgaatttgt 29
||||||||||||||||||||||
Sbjct: 22 taccctgtagatccgaatttgt 43
>30040_ppa-mir-10a:mirbase
Length = 110
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 8 taccctgtagatccgaatttgt 29
||||||||||||||||||||||
Sbjct: 22 taccctgtagatccgaatttgt 43
>30144_ptr-mir-10a:mirbase
Length = 109
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 8 taccctgtagatccgaatttgt 29
||||||||||||||||||||||
Sbjct: 21 taccctgtagatccgaatttgt 42
>31423_oan-mir-10a:mirbase
Length = 122
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 8 taccctgtagatccgaatttgt 29
||||||||||||||||||||||
Sbjct: 28 taccctgtagatccgaatttgt 49
>31773_mmu-mir-10a:mirbase
Length = 110
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 8 taccctgtagatccgaatttgt 29
||||||||||||||||||||||
Sbjct: 22 taccctgtagatccgaatttgt 43
>32655_rno-mir-10a:mirbase
Length = 110
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 8 taccctgtagatccgaatttgt 29
||||||||||||||||||||||
Sbjct: 22 taccctgtagatccgaatttgt 43
>32656_rno-mir-10a:mirbase
Length = 110
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 8 taccctgtagatccgaatttgt 29
||||||||||||||||||||||
Sbjct: 22 taccctgtagatccgaatttgt 43
>33126_bta-mir-10a:mirbase
Length = 109
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 8 taccctgtagatccgaatttgt 29
||||||||||||||||||||||
Sbjct: 22 taccctgtagatccgaatttgt 43
>33909_ssc-mir-10a:mirbase
Length = 80
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 8 taccctgtagatccgaatttgt 29
||||||||||||||||||||||
Sbjct: 9 taccctgtagatccgaatttgt 30
>34197_dre-mir-10a:mirbase
Length = 99
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 8 taccctgtagatccgaatttgt 29
||||||||||||||||||||||
Sbjct: 18 taccctgtagatccgaatttgt 39
>34543_fru-mir-10c:mirbase
Length = 102
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 5 atctaccctgtagatccgaatttgt 29
|||||||||||||||||| ||||||
Sbjct: 12 atctaccctgtagatccggatttgt 36
>34691_tni-mir-10c:mirbase
Length = 108
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 5 atctaccctgtagatccgaatttgt 29
|||||||||||||||||| ||||||
Sbjct: 18 atctaccctgtagatccggatttgt 42
>37343_dvi-mir-10:mirbase
Length = 77
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 9 accctgtagatccgaatttgt 29
|||||||||||||||||||||
Sbjct: 9 accctgtagatccgaatttgt 29
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 43 acaaattcggttctagagagg 63
|||||||||||||||||||||
Sbjct: 48 acaaattcggttctagagagg 68
