miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>38118_bma-mir-153:mirbase
Length = 90
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 58 taattgcatagtcacaaaagtgatgg 83
||||||||||||||||||||||||||
Sbjct: 47 taattgcatagtcacaaaagtgatgg 72
>34974_isc-mir-153:mirbase
Length = 101
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 59 aattgcatagtcacaaaagtgatgg 83
|||||||||||||||||||||||||
Sbjct: 59 aattgcatagtcacaaaagtgatgg 83
>38870_lgi-mir-153:mirbase
Length = 101
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 59 aattgcatagtcacaaaagtgat 81
|||||||||||||||||||||||
Sbjct: 59 aattgcatagtcacaaaagtgat 81
>38755_cte-mir-153:mirbase
Length = 101
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 59 aattgcatagtcacaaaagtgat 81
|||||||||||||||||||||||
Sbjct: 59 aattgcatagtcacaaaagtgat 81
>25501_pma-mir-153-1:mirbase
Length = 76
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 ttgcatagtcacaaaagtgat 81
|||||||||||||||||||||
Sbjct: 47 ttgcatagtcacaaaagtgat 67
>25502_pma-mir-153-2:mirbase
Length = 76
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 ttgcatagtcacaaaagtgat 81
|||||||||||||||||||||
Sbjct: 47 ttgcatagtcacaaaagtgat 67
>25503_pma-mir-153-3:mirbase
Length = 78
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 ttgcatagtcacaaaagtgat 81
|||||||||||||||||||||
Sbjct: 49 ttgcatagtcacaaaagtgat 69
>25800_xtr-mir-153-1:mirbase
Length = 87
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 ttgcatagtcacaaaagtgat 81
|||||||||||||||||||||
Sbjct: 53 ttgcatagtcacaaaagtgat 73
>25801_xtr-mir-153-2:mirbase
Length = 86
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 ttgcatagtcacaaaagtgat 81
|||||||||||||||||||||
Sbjct: 53 ttgcatagtcacaaaagtgat 73
>25972_gga-mir-153:mirbase
Length = 87
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 ttgcatagtcacaaaagtgat 81
|||||||||||||||||||||
Sbjct: 53 ttgcatagtcacaaaagtgat 73
>26480_tgu-mir-153-1:mirbase
Length = 72
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 ttgcatagtcacaaaagtgat 81
|||||||||||||||||||||
Sbjct: 41 ttgcatagtcacaaaagtgat 61
>26481_tgu-mir-153-2:mirbase
Length = 72
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 ttgcatagtcacaaaagtgat 81
|||||||||||||||||||||
Sbjct: 41 ttgcatagtcacaaaagtgat 61
>26729_cfa-mir-153:mirbase
Length = 80
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 ttgcatagtcacaaaagtgat 81
|||||||||||||||||||||
Sbjct: 53 ttgcatagtcacaaaagtgat 73
>27056_eca-mir-153:mirbase
Length = 67
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 ttgcatagtcacaaaagtgat 81
|||||||||||||||||||||
Sbjct: 42 ttgcatagtcacaaaagtgat 62
>27057_eca-mir-153-2:mirbase
Length = 69
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 ttgcatagtcacaaaagtgat 81
|||||||||||||||||||||
Sbjct: 44 ttgcatagtcacaaaagtgat 64
>27401_mdo-mir-153-1:mirbase
Length = 90
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 ttgcatagtcacaaaagtgat 81
|||||||||||||||||||||
Sbjct: 54 ttgcatagtcacaaaagtgat 74
>27402_mdo-mir-153-2:mirbase
Length = 87
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 ttgcatagtcacaaaagtgat 81
|||||||||||||||||||||
Sbjct: 53 ttgcatagtcacaaaagtgat 73
>27763_mml-mir-153-1:mirbase
Length = 90
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 ttgcatagtcacaaaagtgat 81
|||||||||||||||||||||
Sbjct: 54 ttgcatagtcacaaaagtgat 74
>27764_mml-mir-153-2:mirbase
Length = 87
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 ttgcatagtcacaaaagtgat 81
|||||||||||||||||||||
Sbjct: 53 ttgcatagtcacaaaagtgat 73
>28218_mne-mir-153-1:mirbase
Length = 90
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 ttgcatagtcacaaaagtgat 81
|||||||||||||||||||||
Sbjct: 54 ttgcatagtcacaaaagtgat 74
>28219_mne-mir-153-2:mirbase
Length = 87
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 ttgcatagtcacaaaagtgat 81
|||||||||||||||||||||
Sbjct: 53 ttgcatagtcacaaaagtgat 73
>28311_ggo-mir-153:mirbase
Length = 87
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 ttgcatagtcacaaaagtgat 81
|||||||||||||||||||||
Sbjct: 53 ttgcatagtcacaaaagtgat 73
>28480_hsa-mir-153-2:mirbase
Length = 87
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 ttgcatagtcacaaaagtgat 81
|||||||||||||||||||||
Sbjct: 53 ttgcatagtcacaaaagtgat 73
>28479_hsa-mir-153-1:mirbase
Length = 90
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 ttgcatagtcacaaaagtgat 81
|||||||||||||||||||||
Sbjct: 54 ttgcatagtcacaaaagtgat 74
>30248_ptr-mir-153:mirbase
Length = 86
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 ttgcatagtcacaaaagtgat 81
|||||||||||||||||||||
Sbjct: 53 ttgcatagtcacaaaagtgat 73
>30861_ppy-mir-153:mirbase
Length = 90
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 ttgcatagtcacaaaagtgat 81
|||||||||||||||||||||
Sbjct: 54 ttgcatagtcacaaaagtgat 74
>30862_ppy-mir-153-2:mirbase
Length = 87
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 ttgcatagtcacaaaagtgat 81
|||||||||||||||||||||
Sbjct: 53 ttgcatagtcacaaaagtgat 73
>31508_oan-mir-153:mirbase
Length = 145
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 ttgcatagtcacaaaagtgat 81
|||||||||||||||||||||
Sbjct: 96 ttgcatagtcacaaaagtgat 116
>31889_mmu-mir-153:mirbase
Length = 69
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 ttgcatagtcacaaaagtgat 81
|||||||||||||||||||||
Sbjct: 44 ttgcatagtcacaaaagtgat 64
>32760_rno-mir-153:mirbase
Length = 87
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 ttgcatagtcacaaaagtgat 81
|||||||||||||||||||||
Sbjct: 53 ttgcatagtcacaaaagtgat 73
>33240_bta-mir-153-1:mirbase
Length = 90
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 ttgcatagtcacaaaagtgat 81
|||||||||||||||||||||
Sbjct: 54 ttgcatagtcacaaaagtgat 74
>33241_bta-mir-153-2:mirbase
Length = 87
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 ttgcatagtcacaaaagtgat 81
|||||||||||||||||||||
Sbjct: 53 ttgcatagtcacaaaagtgat 73
>34004_ssc-mir-153:mirbase
Length = 87
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 ttgcatagtcacaaaagtgat 81
|||||||||||||||||||||
Sbjct: 53 ttgcatagtcacaaaagtgat 73
>34324_dre-mir-153a:mirbase
Length = 81
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 ttgcatagtcacaaaagtgat 81
|||||||||||||||||||||
Sbjct: 50 ttgcatagtcacaaaagtgat 70
>34608_fru-mir-153a:mirbase
Length = 71
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 ttgcatagtcacaaaagtgat 81
|||||||||||||||||||||
Sbjct: 45 ttgcatagtcacaaaagtgat 65
>34755_tni-mir-153a:mirbase
Length = 72
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 ttgcatagtcacaaaagtgat 81
|||||||||||||||||||||
Sbjct: 46 ttgcatagtcacaaaagtgat 66
>34826_spu-mir-153:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 ttgcatagtcacaaaagtgat 81
|||||||||||||||||||||
Sbjct: 61 ttgcatagtcacaaaagtgat 81
>34882_sko-mir-153:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 ttgcatagtcacaaaagtgat 81
|||||||||||||||||||||
Sbjct: 61 ttgcatagtcacaaaagtgat 81
