miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>38773_cte-mir-279:mirbase
          Length = 101

 Score = 52.0 bits (26), Expect = 8e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 57 tcatgactagatccacactcatccag 82
          ||||||||||||||||||||||||||
Sbjct: 58 tcatgactagatccacactcatccag 83




>38883_lgi-mir-279:mirbase
          Length = 101

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 57 tcatgactagatccacactcatcca 81
          |||||||||||||||||||||||||
Sbjct: 58 tcatgactagatccacactcatcca 82




>34982_isc-mir-279:mirbase
          Length = 92

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 57 tcatgactagatccacactcatcca 81
          |||||||||||||||||||||||||
Sbjct: 49 tcatgactagatccacactcatcca 73




>37773_tca-mir-279b:mirbase
          Length = 92

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 57 tcatgactagatccacactcatcca 81
          |||||||||||||||||||||||||
Sbjct: 56 tcatgactagatccacactcatcca 80




>37774_tca-mir-279b:mirbase
          Length = 92

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 57 tcatgactagatccacactcatcca 81
          |||||||||||||||||||||||||
Sbjct: 56 tcatgactagatccacactcatcca 80




>35552_bmo-mir-279a:mirbase
          Length = 85

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 58 catgactagatccacactcatcca 81
          ||||||||||||||||||||||||
Sbjct: 50 catgactagatccacactcatcca 73




>35079_api-mir-279a:mirbase
          Length = 64

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 58 catgactagatccacactcatcc 80
          |||||||||||||||||||||||
Sbjct: 42 catgactagatccacactcatcc 64