miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF02025;mir-3017;ABLF01036257.1/1354-1428 7029:Acyrthosiphon
pisum (pea aphid)
Length = 75
Score = 109 bits (55), Expect = 3e-24
Identities = 55/55 (100%)
Strand = Plus / Plus
Query: 1 ccgtgttctatgatagactcggctggcgcctgccggtctgtcgcagaacacggca 55
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 ccgtgttctatgatagactcggctggcgcctgccggtctgtcgcagaacacggca 65
>RF02025;mir-3017;ABLF01051735.1/619-693 7029:Acyrthosiphon pisum
(pea aphid)
Length = 75
Score = 50.1 bits (25), Expect = 3e-06
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 1 ccgtgttctatgatagactcggctggcgcctgccggtctgtcgcagaacacgg 53
||||||||| ||| |||||||| ||||| ||||||||||| ||||||||||
Sbjct: 11 ccgtgttctgtgaccgactcggcccgcgcccgccggtctgtcacagaacacgg 63
>RF02025;mir-3017;ABLF01045617.1/3490-3417 7029:Acyrthosiphon
pisum (pea aphid)
Length = 74
Score = 42.1 bits (21), Expect = 6e-04
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 2 cgtgttctatgatagactcggctggcgcctgccggtctgtc 42
|||||||| ||| ||||||||||||||| || ||||||||
Sbjct: 11 cgtgttctgtgactgactcggctggcgcccgcaggtctgtc 51
