miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00027;let-7;AAGE02002929.1/321613-321685 7159:Aedes aegypti
(yellow fever mosquito)
Length = 73
Score = 141 bits (71), Expect = 1e-33
Identities = 71/71 (100%)
Strand = Plus / Plus
Query: 1 cacgttgaggtagttggttgtatagtagtgactgattaaatatctgctatgcaatctgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 cacgttgaggtagttggttgtatagtagtgactgattaaatatctgctatgcaatctgct 61
Query: 61 agcttgtcgtg 71
|||||||||||
Sbjct: 62 agcttgtcgtg 72
>RF00027;let-7;AAWU01000327.1/4832-4903 7176:Culex
quinquefasciatus (southern house mosquito)
Length = 72
Score = 58.0 bits (29), Expect = 1e-08
Identities = 57/65 (87%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 1 cacgttgaggtagttggttgtatagtagtgactgattaaatatctgctatgcaatctgct 60
||||||||||||||||||||||||||| | | ||| ||||||| |||||||||| |||
Sbjct: 2 cacgttgaggtagttggttgtatagta-ttaaaaattcaatatctactatgcaatccgct 60
Query: 61 agctt 65
|||||
Sbjct: 61 agctt 65
>RF00027;let-7;ABLF01019923.1/2377-2307 7029:Acyrthosiphon pisum
(pea aphid)
Length = 71
Score = 48.1 bits (24), Expect = 1e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 6 tgaggtagttggttgtatagtagt 29
||||||||||||||||||||||||
Sbjct: 7 tgaggtagttggttgtatagtagt 30
>RF00027;let-7;ABKP02019321.1/4252-4323 377271:Anopheles gambiae M
Length = 72
Score = 48.1 bits (24), Expect = 1e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 4 gttgaggtagttggttgtatagta 27
||||||||||||||||||||||||
Sbjct: 5 gttgaggtagttggttgtatagta 28
>RF00027;let-7;AAQB01006449.1/358437-358507 7260:Drosophila
willistoni
Length = 71
Score = 42.1 bits (21), Expect = 9e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 5 ttgaggtagttggttgtatagtagt 29
|||||||||| ||||||||||||||
Sbjct: 6 ttgaggtagtaggttgtatagtagt 30
>RF00027;let-7;AAIZ01016032.1/2164-2232 7234:Drosophila persimilis
Length = 69
Score = 42.1 bits (21), Expect = 9e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 5 ttgaggtagttggttgtatagtagt 29
|||||||||| ||||||||||||||
Sbjct: 6 ttgaggtagtaggttgtatagtagt 30
>RF00027;let-7;AAPT01004257.1/151-220 7222:Drosophila grimshawi
Length = 70
Score = 42.1 bits (21), Expect = 9e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 5 ttgaggtagttggttgtatagtagt 29
|||||||||| ||||||||||||||
Sbjct: 6 ttgaggtagtaggttgtatagtagt 30
>RF00027;let-7;AANI01016295.1/2335-2404 7244:Drosophila virilis
Length = 70
Score = 42.1 bits (21), Expect = 9e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 5 ttgaggtagttggttgtatagtagt 29
|||||||||| ||||||||||||||
Sbjct: 6 ttgaggtagtaggttgtatagtagt 30
>RF00027;let-7;AAPU01010514.1/89793-89724 7230:Drosophila
mojavensis
Length = 70
Score = 42.1 bits (21), Expect = 9e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 5 ttgaggtagttggttgtatagtagt 29
|||||||||| ||||||||||||||
Sbjct: 6 ttgaggtagtaggttgtatagtagt 30
