miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00706;mir-263;AAGE02001908.1/33266-33358 7159:Aedes aegypti
(yellow fever mosquito)
Length = 93
Score = 180 bits (91), Expect = 2e-45
Identities = 91/91 (100%)
Strand = Plus / Plus
Query: 1 gaccaattacgaaccttggcactgggagaattcacaggcgctatttgctatcattctgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gaccaattacgaaccttggcactgggagaattcacaggcgctatttgctatcattctgtg 61
Query: 61 gatcttttcgtgccatcgtttaaattcggtc 91
|||||||||||||||||||||||||||||||
Sbjct: 62 gatcttttcgtgccatcgtttaaattcggtc 92
>RF00706;mir-263;ABKP02026803.1/39465-39371 377271:Anopheles
gambiae M
Length = 95
Score = 58.0 bits (29), Expect = 2e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 1 gaccaattacgaaccttggcactgggagaattcacag 37
||||||||| | |||||||||||||||||||||||||
Sbjct: 2 gaccaattatggaccttggcactgggagaattcacag 38
Score = 54.0 bits (27), Expect = 3e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 54 ttctgtggatcttttcgtgccatcgtt 80
|||||||||||||||||||||||||||
Sbjct: 57 ttctgtggatcttttcgtgccatcgtt 83
>RF00706;mir-263;AAJJ01000084.1/138042-137956 7070:Tribolium
castaneum (red flour beetle)
Length = 87
Score = 54.0 bits (27), Expect = 3e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 7 ttacgaaccttggcactgggagaattcacag 37
||||||||||||||||||| |||||||||||
Sbjct: 8 ttacgaaccttggcactggaagaattcacag 38
>RF00706;mir-263;AADK01025663.1/3361-3450 7091:Bombyx mori
(domestic silkworm)
Length = 90
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 14 ccttggcactgggagaattcacagg 38
|||||||||||||||||||||||||
Sbjct: 15 ccttggcactgggagaattcacagg 39
>RF00706;mir-263;AAPQ01006581.1/272485-272396 7220:Drosophila
erecta
Length = 90
Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 15 cttggcactgggagaattcacag 37
|||||||||||||||||||||||
Sbjct: 16 cttggcactgggagaattcacag 38
>RF00706;mir-263;AAFS01001003.1/35414-35505 46245:Drosophila
pseudoobscura pseudoobscura
Length = 92
Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 15 cttggcactgggagaattcacag 37
|||||||||||||||||||||||
Sbjct: 16 cttggcactgggagaattcacag 38
>RF00706;mir-263;AAPP01019315.1/707685-707774 7217:Drosophila
ananassae
Length = 90
Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 15 cttggcactgggagaattcacag 37
|||||||||||||||||||||||
Sbjct: 16 cttggcactgggagaattcacag 38
>RF00706;mir-263;AAQB01006546.1/140884-140979 7260:Drosophila
willistoni
Length = 96
Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 15 cttggcactgggagaattcacag 37
|||||||||||||||||||||||
Sbjct: 16 cttggcactgggagaattcacag 38
>RF00706;mir-263;AAKO01000155.1/113509-113420 7238:Drosophila
sechellia
Length = 90
Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 15 cttggcactgggagaattcacag 37
|||||||||||||||||||||||
Sbjct: 16 cttggcactgggagaattcacag 38
>RF00706;mir-263;AANI01017489.1/74722-74633 7244:Drosophila
virilis
Length = 90
Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 15 cttggcactgggagaattcacag 37
|||||||||||||||||||||||
Sbjct: 15 cttggcactgggagaattcacag 37
