miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00844;mir-67;ABKP02019157.1/49006-49065 377271:Anopheles
gambiae M
Length = 60
Score = 111 bits (56), Expect = 2e-24
Identities = 59/60 (98%)
Strand = Plus / Plus
Query: 21 cactcactcaacctgggtgtgatgcttatttgaatcatcacaacctccttgagtgagcga 80
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1 cactcactcaacctgggtgtgatgcttttttgaatcatcacaacctccttgagtgagcga 60
>RF00844;mir-67;AAJJ01001473.1/10807-10747 7070:Tribolium
castaneum (red flour beetle)
Length = 61
Score = 56.0 bits (28), Expect = 8e-08
Identities = 53/60 (88%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 22 actcactcaacctgggtgtgatgcttatt-tgaatcatcacaacctccttgagtgagcga 80
||||||||||||||||||||||| | | || | |||||||||||||||||||||||||
Sbjct: 2 actcactcaacctgggtgtgatgtgtttgctgtaccatcacaacctccttgagtgagcga 61
>RF00844;mir-67;AAZX01010522.1/11245-11164 7425:Nasonia
vitripennis (jewel wasp)
Length = 82
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 22 actcactcaacctgggtgtgatgctt 47
||||||||||||||||||||||||||
Sbjct: 2 actcactcaacctgggtgtgatgctt 27
>RF00844;mir-67;AADG05000205.1/41347-41272 7460:Apis mellifera
(honey bee)
Length = 76
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 22 actcactcaacctgggtgtgatgctt 47
||||||||||||||||||||||||||
Sbjct: 2 actcactcaacctgggtgtgatgctt 27
>RF00844;mir-67;AAPU01010253.1/29382-29448 7230:Drosophila
mojavensis
Length = 67
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 56 catcacaacctccttgagtgagcga 80
|||||||||||||||||||||||||
Sbjct: 43 catcacaacctccttgagtgagcga 67
Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 22 actcactcaacctgggtgtgatg 44
|||||||||||||||||||||||
Sbjct: 2 actcactcaacctgggtgtgatg 24
>RF00844;mir-67;AAZO01000007.1/12339-12398 121224:Pediculus
humanus corporis (human body louse)
Length = 60
Score = 46.1 bits (23), Expect = 8e-05
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 21 cactcactcaacctgggtgtgatgcttatttgaatcatcacaacctccttgagtgagcg 79
|||||||||||| |||||||| | | || ||| || |||||||||||||||||||||
Sbjct: 1 cactcactcaacttgggtgtgttacgtaagtgattcgccacaacctccttgagtgagcg 59
>RF00844;mir-67;ABLF01022849.1/7851-7790 7029:Acyrthosiphon pisum
(pea aphid)
Length = 62
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 59 cacaacctccttgagtgagcga 80
||||||||||||||||||||||
Sbjct: 41 cacaacctccttgagtgagcga 62
>RF00844;mir-67;ABJB010869367.1/2416-2352 6945:Ixodes scapularis
(black-legged tick)
Length = 65
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 56 catcacaacctccttgagtgag 77
||||||||||||||||||||||
Sbjct: 41 catcacaacctccttgagtgag 62
