miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>51624_ptc-miR164f:pmrd
Length = 90
Score = 46.1 bits (23), Expect = 6e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 27 catgctggagaagcagggtacgtgctaaatc 57
|||||||||||||||||| || |||||||||
Sbjct: 6 catgctggagaagcagggcacatgctaaatc 36
>51862_ptc-miRf10040-akr:pmrd
Length = 91
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 29 tgctggagaagcagggtacgtgctaaatcc 58
|||||||||||||||| |||||| ||||||
Sbjct: 80 tgctggagaagcagggcacgtgcaaaatcc 51
>51619_ptc-miR164a:pmrd
Length = 85
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 29 tgctggagaagcagggtacgtgctaaatcc 58
|||||||||||||||| |||||| ||||||
Sbjct: 8 tgctggagaagcagggcacgtgcaaaatcc 37
>48840_osa-miR164c:pmrd
Length = 119
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 23 ggttcatgctggagaagcagggtacgtgctaaat 56
||||| || |||||||||||||||||||| ||||
Sbjct: 2 ggttcttgttggagaagcagggtacgtgcaaaat 35
>51622_ptc-miR164d:pmrd
Length = 99
Score = 42.1 bits (21), Expect = 9e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 30 gctggagaagcagggtacgtgctaaatcc 58
||||||||||||||| |||||| ||||||
Sbjct: 9 gctggagaagcagggcacgtgcaaaatcc 37
>54411_sbi-miR164b:pmrd
Length = 111
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 29 tgctggagaagcagggtacgtgct 52
|||||||||||||||| |||||||
Sbjct: 18 tgctggagaagcagggcacgtgct 41
>48841_osa-miR164d:pmrd
Length = 94
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 29 tgctggagaagcagggtacgtgct 52
|||||||||||||||| |||||||
Sbjct: 8 tgctggagaagcagggcacgtgct 31
