miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00017;Metazoa_SRP;AADG05008898.1/1128-1425 7460:Apis mellifera
           (honey bee)
          Length = 298

 Score =  182 bits (92), Expect = 5e-46
 Identities = 92/92 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   ggctactcggaggctagttatgacggagggtctgagagcgggggttcctgttggtgcggg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29  ggctactcggaggctagttatgacggagggtctgagagcgggggttcctgttggtgcggg 88

                                           
Query: 61  actcacgtcgactgggtgtccgcgctaagctc 92
           ||||||||||||||||||||||||||||||||
Sbjct: 89  actcacgtcgactgggtgtccgcgctaagctc 120




>RF00017;Metazoa_SRP;AAZX01001936.1/52817-52522 7425:Nasonia
           vitripennis (jewel wasp)
          Length = 296

 Score = 58.0 bits (29), Expect = 2e-08
 Identities = 73/85 (85%), Gaps = 2/85 (2%)
 Strand = Plus / Plus

                                                                       
Query: 9   ggaggctagttatgacggagggtctgagagcg-ggggttcctgttggtgcgggactcacg 67
           |||||||||||||| ||||||||||||| ||| |||||  ||| |||||||||   ||||
Sbjct: 36  ggaggctagttatggcggagggtctgag-gcgaggggtcactgctggtgcgggctccacg 94

                                    
Query: 68  tcgactgggtgtccgcgctaagctc 92
           | ||||||| |||||| ||||||||
Sbjct: 95  ttgactgggcgtccgcactaagctc 119