miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00694;mir-137;BAAB01088495.1/2035-1935 7091:Bombyx mori
(domestic silkworm)
Length = 101
Score = 178 bits (90), Expect = 8e-45
Identities = 90/90 (100%)
Strand = Plus / Plus
Query: 1 taacacgcttggaggtcacgcgtattcttggggaattaacacatatgtgagatgttattg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 taacacgcttggaggtcacgcgtattcttggggaattaacacatatgtgagatgttattg 64
Query: 61 cttgagaatacacgtagctgacaaggagta 90
||||||||||||||||||||||||||||||
Sbjct: 65 cttgagaatacacgtagctgacaaggagta 94
>RF00694;mir-137;AAZO01004444.1/55394-55292 121224:Pediculus
humanus corporis (human body louse)
Length = 103
Score = 97.6 bits (49), Expect = 2e-20
Identities = 68/73 (93%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 14 ggtcacgcgtattcttggggaattaacacat-atgtgagatgttattgcttgagaataca 72
|||||||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 19 ggtcacgcgtattcttggggaattaacacaccaaaagagatgttattgcttgagaataca 78
Query: 73 cgtagctgacaag 85
|||||||||||||
Sbjct: 79 cgtagctgacaag 91
>RF00694;mir-137;AAJJ01002111.1/15264-15166 7070:Tribolium
castaneum (red flour beetle)
Length = 99
Score = 89.7 bits (45), Expect = 6e-18
Identities = 67/73 (91%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 14 ggtcacgcgtattcttggggaattaacacatatgt-gagatgttattgcttgagaataca 72
||||||| ||||||||||| ||||||||||||| | ||||||||||||||||||||||
Sbjct: 17 ggtcacgtgtattcttgggtaattaacacatattcagggatgttattgcttgagaataca 76
Query: 73 cgtagctgacaag 85
|||||||||||||
Sbjct: 77 cgtagctgacaag 89
>RF00694;mir-137;AADG05005118.1/28931-28831 7460:Apis mellifera
(honey bee)
Length = 101
Score = 87.7 bits (44), Expect = 2e-17
Identities = 56/60 (93%)
Strand = Plus / Plus
Query: 18 acgcgtattcttggggaattaacacatatgtgagatgttattgcttgagaatacacgtag 77
|||||||||||||||||||||||||| || || | |||||||||||||||||||||||||
Sbjct: 22 acgcgtattcttggggaattaacacacatttgcgctgttattgcttgagaatacacgtag 81
>RF00694;mir-137;ABLF01001266.1/4970-5069 7029:Acyrthosiphon pisum
(pea aphid)
Length = 100
Score = 63.9 bits (32), Expect = 3e-10
Identities = 61/68 (89%), Gaps = 2/68 (2%)
Strand = Plus / Plus
Query: 19 cgcgtattcttggggaattaacacatatgtgaga-tgttattgcttgagaatacacgtag 77
|||||||||||||| || ||||||||| | ||| |||||||||||||||||||||||||
Sbjct: 23 cgcgtattcttgggacat-aacacatatttaagactgttattgcttgagaatacacgtag 81
Query: 78 ctgacaag 85
|||||||
Sbjct: 82 ttgacaag 89
>RF00694;mir-137;AAGE02029705.1/92443-92543 7159:Aedes aegypti
(yellow fever mosquito)
Length = 101
Score = 60.0 bits (30), Expect = 5e-09
Identities = 61/70 (87%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 17 cacgcgtattcttggggaattaacaca-tatgtgagatgttattgcttgagaatacacgt 75
|||||||||||||||| ||||||||| | | | | |||||||||||||||||||||||
Sbjct: 21 cacgcgtattcttgggttattaacacactgtttatgttgttattgcttgagaatacacgt 80
Query: 76 agctgacaag 85
|| |||||||
Sbjct: 81 agttgacaag 90
>RF00694;mir-137;AAGJ02120953.1/3113-3013 7668:Strongylocentrotus
purpuratus
Length = 101
Score = 54.0 bits (27), Expect = 3e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 51 gatgttattgcttgagaatacacgtag 77
|||||||||||||||||||||||||||
Sbjct: 56 gatgttattgcttgagaatacacgtag 82
>RF00694;mir-137;BAAF04063265.1/5995-5897 8090:Oryzias latipes
(Japanese medaka)
Length = 99
Score = 54.0 bits (27), Expect = 3e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 51 gatgttattgcttgagaatacacgtagctga 81
||||||||||||||||||||| |||||||||
Sbjct: 54 gatgttattgcttgagaatacgcgtagctga 84
>RF00694;mir-137;ABKQ02013341.1/3039-2937 377270:Anopheles gambiae
S
Length = 103
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 53 tgttattgcttgagaatacacgtagctgac 82
||||||||||||||||||||||||| ||||
Sbjct: 58 tgttattgcttgagaatacacgtagttgac 87
>RF00694;mir-137;AAQB01009904.1/3815-3716 7260:Drosophila
willistoni
Length = 100
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 52 atgttattgcttgagaatacacgtag 77
||||||||||||||||||||||||||
Sbjct: 57 atgttattgcttgagaatacacgtag 82
>RF00694;mir-137;AAFS01000057.1/187400-187500 46245:Drosophila
pseudoobscura pseudoobscura
Length = 101
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 52 atgttattgcttgagaatacacgtag 77
||||||||||||||||||||||||||
Sbjct: 56 atgttattgcttgagaatacacgtag 81
>RF00694;mir-137;AAPP01018794.1/261725-261826 7217:Drosophila
ananassae
Length = 102
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 52 atgttattgcttgagaatacacgtag 77
||||||||||||||||||||||||||
Sbjct: 57 atgttattgcttgagaatacacgtag 82
>RF00694;mir-137;AASR01013769.1/615-715 7240:Drosophila simulans
Length = 101
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 52 atgttattgcttgagaatacacgtag 77
||||||||||||||||||||||||||
Sbjct: 56 atgttattgcttgagaatacacgtag 81
>RF00694;mir-137;AANI01011213.1/2061-1961 7244:Drosophila virilis
Length = 101
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 52 atgttattgcttgagaatacacgtag 77
||||||||||||||||||||||||||
Sbjct: 57 atgttattgcttgagaatacacgtag 82
>RF00694;mir-137;AAPU01010131.1/289658-289758 7230:Drosophila
mojavensis
Length = 101
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 52 atgttattgcttgagaatacacgtag 77
||||||||||||||||||||||||||
Sbjct: 57 atgttattgcttgagaatacacgtag 82
>RF00694;mir-137;AAFR03049204.1/9121-9021 13616:Monodelphis
domestica (gray short-tailed opossum)
Length = 101
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 53 tgttattgcttgagaatacacgtag 77
|||||||||||||||||||||||||
Sbjct: 56 tgttattgcttgagaatacacgtag 80
>RF00694;mir-137;CAAE01013623.1/560-657 99883:Tetraodon
nigroviridis
Length = 98
Score = 46.1 bits (23), Expect = 8e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 51 gatgttattgcttgagaatacacgtag 77
||||||||||||||||||||| |||||
Sbjct: 54 gatgttattgcttgagaatacgcgtag 80
>RF00694;mir-137;ABPK01025702.1/584-484 57307:Labeotropheus
fuelleborni
Length = 101
Score = 46.1 bits (23), Expect = 8e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 51 gatgttattgcttgagaatacacgtag 77
||||||||||||||||||||| |||||
Sbjct: 55 gatgttattgcttgagaatacgcgtag 81
>RF00694;mir-137;BAAF04031315.1/5933-5836 8090:Oryzias latipes
(Japanese medaka)
Length = 98
Score = 46.1 bits (23), Expect = 8e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 51 gatgttattgcttgagaatacacgtag 77
||||||||||||||||||||| |||||
Sbjct: 54 gatgttattgcttgagaatacgcgtag 80
>RF00694;mir-137;ABJB010513068.1/3224-3122 6945:Ixodes scapularis
(black-legged tick)
Length = 103
Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 53 tgttattgcttgagaatacacgt 75
|||||||||||||||||||||||
Sbjct: 59 tgttattgcttgagaatacacgt 81
