miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00637;mir-276;AADK01021256.1/890-979 7091:Bombyx mori (domestic
silkworm)
Length = 90
Score = 167 bits (84), Expect = 3e-41
Identities = 84/84 (100%)
Strand = Plus / Plus
Query: 1 ctggtaattaccactagcgaggtatagagttcctacgtatgctaacactgtaggaacttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ctggtaattaccactagcgaggtatagagttcctacgtatgctaacactgtaggaacttc 61
Query: 61 ataccgtgctcttgggtttgccaa 84
||||||||||||||||||||||||
Sbjct: 62 ataccgtgctcttgggtttgccaa 85
>RF00637;mir-276;AAJJ01000143.1/58311-58223 7070:Tribolium
castaneum (red flour beetle)
Length = 89
Score = 69.9 bits (35), Expect = 5e-12
Identities = 60/67 (89%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 10 accactagcgaggtatagagttcctacgt-atgctaacactgtaggaacttcataccgtg 68
||||||||||||||||||||||||||||| || | |||||||||||||||||||||
Sbjct: 9 accactagcgaggtatagagttcctacgtgatttttcggctgtaggaacttcataccgtg 68
Query: 69 ctcttgg 75
|||||||
Sbjct: 69 ctcttgg 75
>RF00637;mir-276;AADG05002822.1/76702-76793 7460:Apis mellifera
(honey bee)
Length = 92
Score = 65.9 bits (33), Expect = 7e-11
Identities = 55/61 (90%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 16 agcgaggtatagagttcctacgta-tgctaacactgtaggaacttcataccgtgctcttg 74
|||||||||||||||||||||||| || | | | |||||||||||||||||||||||||
Sbjct: 18 agcgaggtatagagttcctacgtagtgttcagaaagtaggaacttcataccgtgctcttg 77
Query: 75 g 75
|
Sbjct: 78 g 78
>RF00637;mir-276;AAZO01003220.1/6657-6747 121224:Pediculus humanus
corporis (human body louse)
Length = 91
Score = 58.0 bits (29), Expect = 2e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 47 actgtaggaacttcataccgtgctcttgg 75
|||||||||||||||||||||||||||||
Sbjct: 49 actgtaggaacttcataccgtgctcttgg 77
>RF00637;mir-276;ABLF01003513.1/4658-4754 7029:Acyrthosiphon pisum
(pea aphid)
Length = 97
Score = 58.0 bits (29), Expect = 2e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 10 accactagcgaggtatagagttcctacgt 38
|||||||||||||||||||||||||||||
Sbjct: 10 accactagcgaggtatagagttcctacgt 38
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 50 gtaggaacttcataccgtgctcttgg 75
||||||||||||||||||||||||||
Sbjct: 59 gtaggaacttcataccgtgctcttgg 84
>RF00637;mir-276;ABKQ02021477.1/23012-22918 377270:Anopheles
gambiae S
Length = 95
Score = 54.0 bits (27), Expect = 3e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 49 tgtaggaacttcataccgtgctcttgg 75
|||||||||||||||||||||||||||
Sbjct: 56 tgtaggaacttcataccgtgctcttgg 82
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 16 agcgaggtatagagttcctacg 37
||||||||||||||||||||||
Sbjct: 17 agcgaggtatagagttcctacg 38
>RF00637;mir-276;AAZX01001999.1/5300-5391 7425:Nasonia vitripennis
(jewel wasp)
Length = 92
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 50 gtaggaacttcataccgtgctcttgg 75
||||||||||||||||||||||||||
Sbjct: 53 gtaggaacttcataccgtgctcttgg 78
>RF00637;mir-276;AAGE02007617.1/38970-39063 7159:Aedes aegypti
(yellow fever mosquito)
Length = 94
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 50 gtaggaacttcataccgtgctcttgg 75
||||||||||||||||||||||||||
Sbjct: 56 gtaggaacttcataccgtgctcttgg 81
Score = 46.1 bits (23), Expect = 7e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 16 agcgaggtatagagttcctacgt 38
|||||||||||||||||||||||
Sbjct: 17 agcgaggtatagagttcctacgt 39
>RF00637;mir-276;AANI01017424.1/110847-110939 7244:Drosophila
virilis
Length = 93
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 50 gtaggaacttcataccgtgctcttgg 75
||||||||||||||||||||||||||
Sbjct: 55 gtaggaacttcataccgtgctcttgg 80
Score = 46.1 bits (23), Expect = 7e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 16 agcgaggtatagagttcctacgt 38
|||||||||||||||||||||||
Sbjct: 17 agcgaggtatagagttcctacgt 39
>RF00637;mir-276;AAWU01010561.1/6178-6274 7176:Culex
quinquefasciatus (southern house mosquito)
Length = 97
Score = 50.1 bits (25), Expect = 4e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 51 taggaacttcataccgtgctcttgg 75
|||||||||||||||||||||||||
Sbjct: 60 taggaacttcataccgtgctcttgg 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 14 ctagcgaggtatagagttccta 35
||||||||||||||||||||||
Sbjct: 14 ctagcgaggtatagagttccta 35
>RF00637;mir-276;AAGE02000417.1/11129-11035 7159:Aedes aegypti
(yellow fever mosquito)
Length = 95
Score = 50.1 bits (25), Expect = 4e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 51 taggaacttcataccgtgctcttgg 75
|||||||||||||||||||||||||
Sbjct: 58 taggaacttcataccgtgctcttgg 82
>RF00637;mir-276;ABKP02026752.1/53325-53226 377271:Anopheles
gambiae M
Length = 100
Score = 50.1 bits (25), Expect = 4e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 51 taggaacttcataccgtgctcttgg 75
|||||||||||||||||||||||||
Sbjct: 63 taggaacttcataccgtgctcttgg 87
>RF00637;mir-276;ABKQ02021479.1/6963-6864 377270:Anopheles gambiae
S
Length = 100
Score = 50.1 bits (25), Expect = 4e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 51 taggaacttcataccgtgctcttgg 75
|||||||||||||||||||||||||
Sbjct: 63 taggaacttcataccgtgctcttgg 87
>RF00637;mir-276;AADE01001409.1/12453-12359 46245:Drosophila
pseudoobscura pseudoobscura
Length = 95
Score = 46.1 bits (23), Expect = 7e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 16 agcgaggtatagagttcctacgt 38
|||||||||||||||||||||||
Sbjct: 19 agcgaggtatagagttcctacgt 41
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 50 gtaggaacttcataccgtgctcttgg 75
|||||||||| |||||||||||||||
Sbjct: 57 gtaggaacttaataccgtgctcttgg 82
>RF00637;mir-276;AE014296.4/10312890-10312983 7227:Drosophila
melanogaster (fruit fly)
Length = 94
Score = 46.1 bits (23), Expect = 7e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 16 agcgaggtatagagttcctacgt 38
|||||||||||||||||||||||
Sbjct: 19 agcgaggtatagagttcctacgt 41
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 50 gtaggaacttcataccgtgctcttgg 75
|||||||||| |||||||||||||||
Sbjct: 56 gtaggaacttaataccgtgctcttgg 81
>RF00637;mir-276;AAPU01011641.1/29322-29227 7230:Drosophila
mojavensis
Length = 96
Score = 46.1 bits (23), Expect = 7e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 16 agcgaggtatagagttcctacgt 38
|||||||||||||||||||||||
Sbjct: 19 agcgaggtatagagttcctacgt 41
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 50 gtaggaacttcataccgtgctcttgg 75
|||||||||| |||||||||||||||
Sbjct: 58 gtaggaacttaataccgtgctcttgg 83
