miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>40446_gma-MIR167f:mirbase
Length = 109
Score = 216 bits (109), Expect = 3e-57
Identities = 109/109 (100%)
Strand = Plus / Minus
Query: 9 tcatgcggccaacaactactaggtgaaactgccacatgatctgatctttccacagcaagt 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 tcatgcggccaacaactactaggtgaaactgccacatgatctgatctttccacagcaagt 50
Query: 69 gagggaagttaagatcatgctggcagcttcaactggtagtggtgcatga 117
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 49 gagggaagttaagatcatgctggcagcttcaactggtagtggtgcatga 1
>40445_gma-MIR167e:mirbase
Length = 109
Score = 200 bits (101), Expect = 2e-52
Identities = 107/109 (98%)
Strand = Plus / Minus
Query: 9 tcatgcggccaacaactactaggtgaaactgccacatgatctgatctttccacagcaagt 68
||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 109 tcatgcggccagcaactactaggtgaaactgccacatgatctgatctttccacggcaagt 50
Query: 69 gagggaagttaagatcatgctggcagcttcaactggtagtggtgcatga 117
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 49 gagggaagttaagatcatgctggcagcttcaactggtagtggtgcatga 1
>41345_ptc-MIR167g:mirbase
Length = 86
Score = 97.6 bits (49), Expect = 2e-21
Identities = 73/81 (90%)
Strand = Plus / Minus
Query: 29 aggtgaaactgccacatgatctgatctttccacagcaagtgagggaagttaagatcatgc 88
||||||||||||||||||||||| ||||||| | ||| |||||| |||||||||||||
Sbjct: 81 aggtgaaactgccacatgatctgttctttcctcgacaaaggagggaggttaagatcatgc 22
Query: 89 tggcagcttcaactggtagtg 109
||||||||||||||| |||||
Sbjct: 21 tggcagcttcaactgatagtg 1
>40401_ahy-MIR167:mirbase
Length = 118
Score = 87.7 bits (44), Expect = 2e-18
Identities = 91/106 (85%), Gaps = 8/106 (7%)
Strand = Plus / Minus
Query: 21 caactactaggtgaaactgccacatgatctgatctttccacagcaagt-------gaggg 73
|||| |||||||||||||||||||||||||||||| || || ||| | |||||
Sbjct: 107 caacaactaggtgaaactgccacatgatctgatctcaccccaacaaatcataggagaggg 48
Query: 74 aa-gttaagatcatgctggcagcttcaactggtagtggtgcatgat 118
|| ||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 47 aaagttaagatcatgctggcagcttcaacttgtagtggtgcatgat 2
>40400_ahy-MIR167:mirbase
Length = 118
Score = 87.7 bits (44), Expect = 2e-18
Identities = 91/106 (85%), Gaps = 8/106 (7%)
Strand = Plus / Minus
Query: 21 caactactaggtgaaactgccacatgatctgatctttccacagcaagt-------gaggg 73
|||| |||||||||||||||||||||||||||||| || || ||| | |||||
Sbjct: 107 caacaactaggtgaaactgccacatgatctgatctcaccccaacaaatcataggagaggg 48
Query: 74 aa-gttaagatcatgctggcagcttcaactggtagtggtgcatgat 118
|| ||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 47 aaagttaagatcatgctggcagcttcaacttgtagtggtgcatgat 2
>41228_csi-MIR167b:mirbase
Length = 123
Score = 77.8 bits (39), Expect = 2e-15
Identities = 77/87 (88%), Gaps = 2/87 (2%)
Strand = Plus / Minus
Query: 29 aggtgaaactgccacatgatctg-atctttccac-agcaagtgagggaagttaagatcat 86
||||||||||||| ||||||||| ||| |||| | ||||| |||| |||||||||||||
Sbjct: 92 aggtgaaactgccgcatgatctgtatcattcctcgagcaaaggaggaaagttaagatcat 33
Query: 87 gctggcagcttcaactggtagtggtgc 113
||||||||||||| ||| |||||||||
Sbjct: 32 gctggcagcttcatctgatagtggtgc 6
>40353_rco-MIR167b:mirbase
Length = 80
Score = 75.8 bits (38), Expect = 7e-15
Identities = 65/74 (87%)
Strand = Plus / Minus
Query: 30 ggtgaaactgccacatgatctgatctttccacagcaagtgagggaagttaagatcatgct 89
|||||||||||||||||||||||||| ||| || | || |||| | || ||||||||||
Sbjct: 75 ggtgaaactgccacatgatctgatctctcctcaacgagggaggaagatttagatcatgct 16
Query: 90 ggcagcttcaactg 103
||||||||||||||
Sbjct: 15 ggcagcttcaactg 2
>41595_vvi-MIR167e:mirbase
Length = 90
Score = 73.8 bits (37), Expect = 3e-14
Identities = 70/81 (86%)
Strand = Plus / Minus
Query: 29 aggtgaaactgccacatgatctgatctttccacagcaagtgagggaagttaagatcatgc 88
||||||||||||||||||||||||||| | || ||| || | ||||| |||||||||
Sbjct: 81 aggtgaaactgccacatgatctgatctctgttcacaaagggaagcaagtttagatcatgc 22
Query: 89 tggcagcttcaactggtagtg 109
||||||||||||||| |||||
Sbjct: 21 tggcagcttcaactgatagtg 1
>41344_ptc-MIR167f:mirbase
Length = 87
Score = 71.9 bits (36), Expect = 1e-13
Identities = 67/76 (88%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 29 aggtgaaactgccacatgatctgat-ctttccacagcaagtgagggaagttaagatcatg 87
||||||||||||||||||||||| | |||||| || ||| |||| | | ||||||||||
Sbjct: 82 aggtgaaactgccacatgatctgtttctttcctcaacaaaggaggaaggctaagatcatg 23
Query: 88 ctggcagcttcaactg 103
||||||||||||||||
Sbjct: 22 ctggcagcttcaactg 7
>41098_tcc-MIR167a:mirbase
Length = 111
Score = 61.9 bits (31), Expect = 1e-10
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 72 ggaagttaagatcatgctggcagcttcaactggtagtgg 110
||||||| |||||||||||||||||||||||| ||||||
Sbjct: 48 ggaagtttagatcatgctggcagcttcaactgctagtgg 10
>41593_vvi-MIR167c:mirbase
Length = 91
Score = 60.0 bits (30), Expect = 4e-10
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 70 agggaagttaagatcatgctggcagcttcaactg 103
||||||||| ||||||||||||||||||||||||
Sbjct: 40 agggaagttgagatcatgctggcagcttcaactg 7
>41533_sly-MIR167:mirbase
Length = 116
Score = 58.0 bits (29), Expect = 2e-09
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 74 aagttaagatcatgctggcagcttcaactggtagtggtgca 114
||||| |||||||||||||||||||||||| ||||| ||||
Sbjct: 44 aagtttagatcatgctggcagcttcaactgctagtgctgca 4
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 37 ctgccacatgatctgatctttcc 59
|||||||||||||||||||||||
Sbjct: 92 ctgccacatgatctgatctttcc 70
>41100_tcc-MIR167c:mirbase
Length = 112
Score = 56.0 bits (28), Expect = 7e-09
Identities = 67/78 (85%), Gaps = 4/78 (5%)
Strand = Plus / Minus
Query: 29 aggtgaaactgccacatgatctgatctttcc---acagcaagtgagggaagttaagatca 85
|||||||||||||| |||||||||||||||| | | ||| ||| || |||||||||
Sbjct: 93 aggtgaaactgccatatgatctgatctttccttgataaaaaga-aggaaaattaagatca 35
Query: 86 tgctggcagcttcaactg 103
||||||||||||||||||
Sbjct: 34 tgctggcagcttcaactg 17
>41341_ptc-MIR167c:mirbase
Length = 89
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 80 agatcatgctggcagcttcaactggtagtg 109
|||||||||||||||||||||||| |||||
Sbjct: 30 agatcatgctggcagcttcaactgctagtg 1
>41339_ptc-MIR167a:mirbase
Length = 89
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 80 agatcatgctggcagcttcaactggtagtg 109
|||||||||||||||||||||||| |||||
Sbjct: 30 agatcatgctggcagcttcaactgctagtg 1
>41343_ptc-MIR167e:mirbase
Length = 91
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 74 aagttaagatcatgctggcagcttcaact 102
||||| |||||||||||||||||||||||
Sbjct: 36 aagttcagatcatgctggcagcttcaact 8
>41280_ctr-MIR167:mirbase
Length = 121
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 74 aagttaagatcatgctggcagcttcaact 102
||||| |||||||||||||||||||||||
Sbjct: 49 aagttcagatcatgctggcagcttcaact 21
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 28 taggtgaaactgccacatgatctg 51
||||||||||||||| ||||||||
Sbjct: 101 taggtgaaactgccagatgatctg 78
>41227_csi-MIR167a:mirbase
Length = 103
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 74 aagttaagatcatgctggcagcttcaact 102
||||| |||||||||||||||||||||||
Sbjct: 40 aagttcagatcatgctggcagcttcaact 12
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 28 taggtgaaactgccacatgatctg 51
||||||||||||||| ||||||||
Sbjct: 92 taggtgaaactgccagatgatctg 69
>41209_ccl-MIR167b:mirbase
Length = 202
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 74 aagttaagatcatgctggcagcttcaact 102
||||| |||||||||||||||||||||||
Sbjct: 46 aagttcagatcatgctggcagcttcaact 18
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 28 taggtgaaactgccacatgatctg 51
||||||||||||||| ||||||||
Sbjct: 98 taggtgaaactgccagatgatctg 75
>41208_ccl-MIR167a:mirbase
Length = 121
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 74 aagttaagatcatgctggcagcttcaact 102
||||| |||||||||||||||||||||||
Sbjct: 49 aagttcagatcatgctggcagcttcaact 21
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 28 taggtgaaactgccacatgatctg 51
||||||||||||||| ||||||||
Sbjct: 101 taggtgaaactgccagatgatctg 78
>41592_vvi-MIR167b:mirbase
Length = 99
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 80 agatcatgctggcagcttcaactg 103
||||||||||||||||||||||||
Sbjct: 30 agatcatgctggcagcttcaactg 7
Score = 46.1 bits (23), Expect = 6e-06
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 29 aggtgaaactgccacatgatctgatctttcc 59
|||||||||||||||||||||| |||||||
Sbjct: 90 aggtgaaactgccacatgatctagtctttcc 60
>41346_ptc-MIR167h:mirbase
Length = 91
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 28 taggtgaaactgccacatgatctgatctttcc 59
||||||||||||||||||||||| |||||||
Sbjct: 87 taggtgaaactgccacatgatctagtctttcc 56
>40632_gso-MIR167a:mirbase
Length = 80
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 80 agatcatgctggcagcttcaactg 103
||||||||||||||||||||||||
Sbjct: 28 agatcatgctggcagcttcaactg 5
>40447_gma-MIR167g:mirbase
Length = 78
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 80 agatcatgctggcagcttcaactg 103
||||||||||||||||||||||||
Sbjct: 27 agatcatgctggcagcttcaactg 4
>40645_lja-MIR167:mirbase
Length = 108
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 80 agatcatgctggcagcttcaact 102
|||||||||||||||||||||||
Sbjct: 40 agatcatgctggcagcttcaact 18
>40354_rco-MIR167c:mirbase
Length = 76
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 80 agatcatgctggcagcttcaact 102
|||||||||||||||||||||||
Sbjct: 25 agatcatgctggcagcttcaact 3
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 29 aggtgaaactgccacatgatct 50
||||||||||||||||||||||
Sbjct: 72 aggtgaaactgccacatgatct 51
>42738_zma-MIR167h:mirbase
Length = 143
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 80 agatcatgctggcagcttcaac 101
||||||||||||||||||||||
Sbjct: 40 agatcatgctggcagcttcaac 19
>42521_sbi-MIR167c:mirbase
Length = 131
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 80 agatcatgctggcagcttcaac 101
||||||||||||||||||||||
Sbjct: 39 agatcatgctggcagcttcaac 18
>41752_bdi-MIR167d:mirbase
Length = 204
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 80 agatcatgctggcagcttcaac 101
||||||||||||||||||||||
Sbjct: 50 agatcatgctggcagcttcaac 29
>41591_vvi-MIR167a:mirbase
Length = 351
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 80 agatcatgctggcagcttcaac 101
||||||||||||||||||||||
Sbjct: 30 agatcatgctggcagcttcaac 9
>40443_gma-MIR167c:mirbase
Length = 375
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 80 agatcatgctggcagcttcaac 101
||||||||||||||||||||||
Sbjct: 30 agatcatgctggcagcttcaac 9
>42740_zma-MIR167j:mirbase
Length = 109
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 32 tgaaactgccacatgatctga 52
|||||||||||||||||||||
Sbjct: 106 tgaaactgccacatgatctga 86
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 80 agatcatgctggcagcttca 99
||||||||||||||||||||
Sbjct: 21 agatcatgctggcagcttca 2
>42739_zma-MIR167i:mirbase
Length = 130
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 80 agatcatgctggcagcttcaa 100
|||||||||||||||||||||
Sbjct: 40 agatcatgctggcagcttcaa 20
>41229_csi-MIR167c:mirbase
Length = 341
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 80 agatcatgctggcagcttcaa 100
|||||||||||||||||||||
Sbjct: 30 agatcatgctggcagcttcaa 10
>42737_zma-MIR167g:mirbase
Length = 243
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 80 agatcatgctggcagcttca 99
||||||||||||||||||||
Sbjct: 40 agatcatgctggcagcttca 21
>42736_zma-MIR167f:mirbase
Length = 119
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 80 agatcatgctggcagcttca 99
||||||||||||||||||||
Sbjct: 40 agatcatgctggcagcttca 21
>42735_zma-MIR167e:mirbase
Length = 119
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 80 agatcatgctggcagcttca 99
||||||||||||||||||||
Sbjct: 40 agatcatgctggcagcttca 21
>42734_zma-MIR167d:mirbase
Length = 133
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 80 agatcatgctggcagcttca 99
||||||||||||||||||||
Sbjct: 36 agatcatgctggcagcttca 17
