miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>35589_bmo-mir-2731-1:mirbase
          Length = 91

 Score =  172 bits (87), Expect = 3e-44
 Identities = 90/91 (98%)
 Strand = Plus / Plus

                                                                      
Query: 1  aaacctaacagatgcgagaccatggtatgtggaaataaaagccacccggtttttatcttt 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  aaacctaacagatgcgagaccatggtatgtggaaataaaagccacccggtttttatcttt 60

                                         
Query: 61 ccacaccaaaagatccacatttcccgaggtg 91
          |||||||||||||||||||| ||||||||||
Sbjct: 61 ccacaccaaaagatccacatctcccgaggtg 91




>35610_bmo-mir-2739:mirbase
          Length = 98

 Score = 81.8 bits (41), Expect = 8e-17
 Identities = 68/77 (88%)
 Strand = Plus / Minus

                                                                      
Query: 15 cgagaccatggtatgtggaaataaaagccacccggtttttatctttccacaccaaaagat 74
          |||||||||||||||| ||||| |||||||| |||||| ||||  ||||||||| || ||
Sbjct: 81 cgagaccatggtatgttgaaattaaagccacgcggtttctatccctccacaccataatat 22

                           
Query: 75 ccacatttcccgaggtg 91
          |||||| ||||||||||
Sbjct: 21 ccacatctcccgaggtg 5