miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00727;bantam;AAWU01005949.1/119500-119406 7176:Culex
quinquefasciatus (southern house mosquito)
Length = 95
Score = 139 bits (70), Expect = 5e-33
Identities = 70/70 (100%)
Strand = Plus / Plus
Query: 1 agaaccggttttcattttcgatctgacttatttgatttaacagagtgagatcattttgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 agaaccggttttcattttcgatctgacttatttgatttaacagagtgagatcattttgaa 70
Query: 61 agctgatttt 70
||||||||||
Sbjct: 71 agctgatttt 80
>RF00727;bantam;AAGE02003301.1/208408-208314 7159:Aedes aegypti
(yellow fever mosquito)
Length = 95
Score = 125 bits (63), Expect = 7e-29
Identities = 70/71 (98%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 1 agaaccggttttcattttcgatctgacttatttgatttaac-agagtgagatcattttga 59
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 11 agaaccggttttcattttcgatctgacttatttgatttaacaagagtgagatcattttga 70
Query: 60 aagctgatttt 70
|||||||||||
Sbjct: 71 aagctgatttt 81
>RF00727;bantam;AAAB01008879.1/1730921-1731017 180454:Anopheles
gambiae str. PEST
Length = 97
Score = 69.9 bits (35), Expect = 4e-12
Identities = 65/73 (89%), Gaps = 4/73 (5%)
Strand = Plus / Plus
Query: 1 agaaccggttttcattttcgatctgacttatttgatttaaca---gagtgagatcatttt 57
||||||||||||||||||||||||||||||||| ||| ||| |||||||||| |||
Sbjct: 11 agaaccggttttcattttcgatctgacttattt-ttttcacaaacaagtgagatcacttt 69
Query: 58 gaaagctgatttt 70
|||||||||||||
Sbjct: 70 gaaagctgatttt 82
>RF00727;bantam;AAPU01011505.1/2277-2366 7230:Drosophila
mojavensis
Length = 90
Score = 54.0 bits (27), Expect = 2e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 44 agtgagatcattttgaaagctgatttt 70
|||||||||||||||||||||||||||
Sbjct: 51 agtgagatcattttgaaagctgatttt 77
>RF00727;bantam;AANI01017339.1/10975-11064 7244:Drosophila virilis
Length = 90
Score = 54.0 bits (27), Expect = 2e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 44 agtgagatcattttgaaagctgatttt 70
|||||||||||||||||||||||||||
Sbjct: 50 agtgagatcattttgaaagctgatttt 76
>RF00727;bantam;AAZO01005717.1/66950-67042 121224:Pediculus
humanus corporis (human body louse)
Length = 93
Score = 42.1 bits (21), Expect = 9e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 46 tgagatcattttgaaagctgatttt 70
|||||||||| ||||||||||||||
Sbjct: 55 tgagatcattgtgaaagctgatttt 79
>RF00727;bantam;AAZX01004974.1/17134-17222 7425:Nasonia
vitripennis (jewel wasp)
Length = 89
Score = 42.1 bits (21), Expect = 9e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 46 tgagatcattttgaaagctgatttt 70
|||||||||| ||||||||||||||
Sbjct: 52 tgagatcattgtgaaagctgatttt 76
>RF00727;bantam;AADG05005002.1/2155-2243 7460:Apis mellifera
(honey bee)
Length = 89
Score = 42.1 bits (21), Expect = 9e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 46 tgagatcattttgaaagctgatttt 70
|||||||||| ||||||||||||||
Sbjct: 52 tgagatcattgtgaaagctgatttt 76
>RF00727;bantam;AAJJ01000881.1/39195-39283 7070:Tribolium
castaneum (red flour beetle)
Length = 89
Score = 42.1 bits (21), Expect = 9e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 46 tgagatcattttgaaagctgatttt 70
|||||||||| ||||||||||||||
Sbjct: 52 tgagatcattgtgaaagctgatttt 76
>RF00727;bantam;ABJB010305858.1/1270-1184 6945:Ixodes scapularis
(black-legged tick)
Length = 87
Score = 42.1 bits (21), Expect = 9e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 46 tgagatcattttgaaagctgatttt 70
|||||||||| ||||||||||||||
Sbjct: 53 tgagatcattgtgaaagctgatttt 77
