miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00752;mir-14;AAWU01029067.1/5309-5242 7176:Culex
quinquefasciatus (southern house mosquito)
Length = 68
Score = 135 bits (68), Expect = 1e-31
Identities = 68/68 (100%)
Strand = Plus / Plus
Query: 12 tgtgggagcgagattaaggcttgctggtttcacgttcgagtaaagtcagtctttttctct 71
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgtgggagcgagattaaggcttgctggtttcacgttcgagtaaagtcagtctttttctct 60
Query: 72 ctcctatt 79
||||||||
Sbjct: 61 ctcctatt 68
>RF00752;mir-14;ABKQ02021708.1/8469-8536 377270:Anopheles gambiae
S
Length = 68
Score = 67.9 bits (34), Expect = 2e-11
Identities = 63/69 (91%), Gaps = 4/69 (5%)
Strand = Plus / Plus
Query: 12 tgtgggagcgagattaaggcttgctggtt-tcacgttcga-gtaaagtcagtctttttct 69
||||||||||||||||||||||||||||| ||||||| | || |||||||||||||||
Sbjct: 1 tgtgggagcgagattaaggcttgctggttatcacgttaaacgt--agtcagtctttttct 58
Query: 70 ctctcctat 78
|||||||||
Sbjct: 59 ctctcctat 67
>RF00752;mir-14;AAGE02012112.1/774-706 7159:Aedes aegypti (yellow
fever mosquito)
Length = 69
Score = 56.0 bits (28), Expect = 9e-08
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 12 tgtgggagcgagattaaggcttgctggt 39
||||||||||||||||||||||||||||
Sbjct: 1 tgtgggagcgagattaaggcttgctggt 28
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 54 aagtcagtctttttctctctcctatt 79
||||||||||||||||||||||||||
Sbjct: 44 aagtcagtctttttctctctcctatt 69
>RF00752;mir-14;AAPU01010044.1/154796-154858 7230:Drosophila
mojavensis
Length = 63
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 55 agtcagtctttttctctctcctat 78
||||||||||||||||||||||||
Sbjct: 39 agtcagtctttttctctctcctat 62
